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PI0004190 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004190
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr04:23173601..23175754
RNA-Seq ExpressionPI0004190
SyntenyPI0004190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]2.0e-6079.61Show/hide
Query:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ
        MTTLLTSFVQG  LKVT+CGV  LVGHPN+KCP++  DVN +R YDP+GNTYNS WRDNPN RWGNDNQK TQA  +SSNQG  LE+I+KALATNTLSFQ
Subjt:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ

Query:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK
        QEMKQQMTQLTT ISK++GKGKLPAQPDYANVSAISLRSGKIL+TP+++EKK
Subjt:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.4e-6078.95Show/hide
Query:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ
        MTTLLTSFVQG  LKVT+CGV GLVGHPN+KCP++  DVN +R YDPHGNTYNS WRDNPN RWGNDNQK TQA S+SSNQG  LE+I+KALATNTLSFQ
Subjt:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ

Query:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK
        QEMKQQMTQLTT ISK++GKGKL AQ +YANVSA+SLRSGKIL+TP+++EKK
Subjt:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK

KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.6e-6077.85Show/hide
Query:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ
        MTTLLTSFVQG   KVT+CGV GLVGHPN+KC K+  DVN +R YDPH NTYNS WRDNPN RWGNDNQK TQA S+SSNQG  LE+I+KAL TNTLSFQ
Subjt:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ

Query:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKKKLDEEE
        QEMKQQMTQLTT ISK++GKGKLPAQPDYANVSAISLRSGKIL+TP+++EKKK   +E
Subjt:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKKKLDEEE

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.8e-5978.95Show/hide
Query:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ
        MTTLLTSFVQG   KVT+CGV GLVGHPN+KCPK+  DVN +R YDPH NTYNS WRDN N RWGNDNQK TQA S+SSNQG  LE+I+KALATNTLSFQ
Subjt:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ

Query:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK
        Q+MKQQMTQLTT ISK++GKGKLPAQPD+ANVSAISLRSGKIL+TP+++EKK
Subjt:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK

XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]3.3e-6078.95Show/hide
Query:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ
        MTTLLTSFVQG ALKVT+CGV GLVG+PN+KCPK+  DVN +R YDPHGNTYN  WRDNPN RWGNDNQK TQA  +SSNQG  LE+I+KALATNTLSFQ
Subjt:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ

Query:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK
        Q+MKQQMTQLTT ISK++GKGKLPAQPD+ NVSAISLRSGKIL+TP+++EKK
Subjt:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK

TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032911.6e-6078.95Show/hide
Query:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ
        MTTLLTSFVQG ALKVT+CGV GLVG+PN+KCPK+  DVN +R YDPHGNTYN  WRDNPN RWGNDNQK TQA  +SSNQG  LE+I+KALATNTLSFQ
Subjt:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ

Query:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK
        Q+MKQQMTQLTT ISK++GKGKLPAQPD+ NVSAISLRSGKIL+TP+++EKK
Subjt:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK

A0A5A7V0Q7 Retrotransposon gag protein1.2e-6077.85Show/hide
Query:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ
        MTTLLTSFVQG   KVT+CGV GLVGHPN+KC K+  DVN +R YDPH NTYNS WRDNPN RWGNDNQK TQA S+SSNQG  LE+I+KAL TNTLSFQ
Subjt:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ

Query:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKKKLDEEE
        QEMKQQMTQLTT ISK++GKGKLPAQPDYANVSAISLRSGKIL+TP+++EKKK   +E
Subjt:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKKKLDEEE

A0A5D3CB46 Retrotransposon gag protein1.4e-5978.95Show/hide
Query:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ
        MTTLLTSFVQG   KVT+CGV GLVGHPN+KCPK+  DVN +R YDPH NTYNS WRDN N RWGNDNQK TQA S+SSNQG  LE+I+KALATNTLSFQ
Subjt:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ

Query:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK
        Q+MKQQMTQLTT ISK++GKGKLPAQPD+ANVSAISLRSGKIL+TP+++EKK
Subjt:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK

A0A5D3CRR8 Retrotransposon gag protein2.1e-6078.95Show/hide
Query:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ
        MTTLLTSFVQG  LKVT+CGV GLVGHPN+KCP++  DVN +R YDPHGNTYNS WRDNPN RWGNDNQK TQA S+SSNQG  LE+I+KALATNTLSFQ
Subjt:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ

Query:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK
        QEMKQQMTQLTT ISK++GKGKL AQ +YANVSA+SLRSGKIL+TP+++EKK
Subjt:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK

E5GBZ4 Retrotransposon gag protein9.5e-6179.61Show/hide
Query:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ
        MTTLLTSFVQG  LKVT+CGV  LVGHPN+KCP++  DVN +R YDP+GNTYNS WRDNPN RWGNDNQK TQA  +SSNQG  LE+I+KALATNTLSFQ
Subjt:  MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQ

Query:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK
        QEMKQQMTQLTT ISK++GKGKLPAQPDYANVSAISLRSGKIL+TP+++EKK
Subjt:  QEMKQQMTQLTTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTCTTCTTACTTCTTTTGTGCAAGGTGGTGCTCTCAAAGTAACCCAATGTGGAGTTTATGGCTTGGTTGGTCATCCAAATAACAAATGTCCCAAGTTGACCAA
TGATGTGAACGCTATTAGGATGTATGACCCCCACGGTAATACATACAATTCGAGATGGAGAGACAACCCAAACTTCAGATGGGGGAATGACAACCAAAAGCCCACCCAAG
CAACATCCTCCTCTTCAAACCAAGGTATGATTCTTGAAAACATAGTCAAAGCATTAGCTACTAACACTCTTTCTTTTCAACAAGAAATGAAACAACAAATGACTCAACTC
ACTACCACCATAAGCAAGTTGGAAGGAAAAGGCAAGCTTCCGGCCCAACCGGACTATGCAAATGTGAGTGCCATCTCACTAAGAAGTGGTAAGATTCTTGAAACCCCTTC
TAGTGAAGAAAAAAAGAAACTCGACGAAGAAGAATATACCAGGCATTCAGCGTTGCAACCAGGCGTCCAAGATATCATCTGGCGAACAAGCCAGCACATTGCTATGCGAG
GCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTCTTCTTACTTCTTTTGTGCAAGGTGGTGCTCTCAAAGTAACCCAATGTGGAGTTTATGGCTTGGTTGGTCATCCAAATAACAAATGTCCCAAGTTGACCAA
TGATGTGAACGCTATTAGGATGTATGACCCCCACGGTAATACATACAATTCGAGATGGAGAGACAACCCAAACTTCAGATGGGGGAATGACAACCAAAAGCCCACCCAAG
CAACATCCTCCTCTTCAAACCAAGGTATGATTCTTGAAAACATAGTCAAAGCATTAGCTACTAACACTCTTTCTTTTCAACAAGAAATGAAACAACAAATGACTCAACTC
ACTACCACCATAAGCAAGTTGGAAGGAAAAGGCAAGCTTCCGGCCCAACCGGACTATGCAAATGTGAGTGCCATCTCACTAAGAAGTGGTAAGATTCTTGAAACCCCTTC
TAGTGAAGAAAAAAAGAAACTCGACGAAGAAGAATATACCAGGCATTCAGCGTTGCAACCAGGCGTCCAAGATATCATCTGGCGAACAAGCCAGCACATTGCTATGCGAG
GCTGA
Protein sequenceShow/hide protein sequence
MTTLLTSFVQGGALKVTQCGVYGLVGHPNNKCPKLTNDVNAIRMYDPHGNTYNSRWRDNPNFRWGNDNQKPTQATSSSSNQGMILENIVKALATNTLSFQQEMKQQMTQL
TTTISKLEGKGKLPAQPDYANVSAISLRSGKILETPSSEEKKKLDEEEYTRHSALQPGVQDIIWRTSQHIAMRG