; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004194 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004194
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUBP-type domain-containing protein
Genome locationchr07:505547..508001
RNA-Seq ExpressionPI0004194
SyntenyPI0004194
Gene Ontology termsGO:0009958 - positive gravitropism (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001607 - Zinc finger, UBP-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044348.1 histone deacetylase 6 [Cucumis melo var. makuwa]4.1e-7795.95Show/hide
Query:  MAEEAGSSSSTSNPLPLI--IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MAEEAGSSSSTSN LPLI  IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP TPCSQCQNP ENWLCLCCKDVFCSRFVNKHMLQHYEQST
Subjt:  MAEEAGSSSSTSNPLPLI--IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGE PPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

KAG6600290.1 Histone deacetylase 6, partial [Cucurbita argyrosperma subsp. sororia]4.2e-6683.56Show/hide
Query:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC
        MA EAGSSS  SNP P +IE+EV EE LYGA SGWV+ALTSCDHL SL SDLAHIPPP T C +C+NP ENWLCLCCK+VFCSRFVNKHMLQHY+QS H 
Subjt:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LALSYSDLSVWCFSCDAYLDAQ+IQELRPVHEVAYILKFGEAPPFR
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

XP_004152271.1 histone deacetylase 6 [Cucumis sativus]2.8e-7896.58Show/hide
Query:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC
        MAE+AGSSSSTSNPL LIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP TPCSQCQNP ENW+CLCCKDVFCSRFVNKHMLQHYEQSTHC
Subjt:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

XP_008454385.1 PREDICTED: histone deacetylase 6 [Cucumis melo]1.4e-7796.62Show/hide
Query:  MAEEAGSSSSTSNPLPLI--IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MAEEAGSSSSTSN LPLI  IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP TPCSQCQNP ENWLCLCCKDVFCSRFVNKHMLQHYEQST
Subjt:  MAEEAGSSSSTSNPLPLI--IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

XP_038904979.1 histone deacetylase 6 [Benincasa hispida]9.7e-7189.73Show/hide
Query:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC
        MA+EAGSSS  SNPLPLI+E+EVEEELLYGA SGWV+ALTSCDHLA LS DLAHIPPP  PCS+CQNP ENWLCL CKDVFCSRFVNKHMLQHYEQ THC
Subjt:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

TrEMBL top hitse value%identityAlignment
A0A061E839 Regulator of Vps4 activity in the MVB pathway protein4.4e-6174.66Show/hide
Query:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC
        MA++AG+SSS    L +I+E+E + +L+YGA SGWV+A T CDHLASLSSDLAHIP P+TPC++CQ+P+ENWLCLCCKDV CSRFVNKHML+HY+Q+THC
Subjt:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        +ALSYSDLSVWCF+CD YLDAQVI++LRPVHE AYILKFGEAPP R
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A0A0KT14 UBP-type domain-containing protein1.4e-7896.58Show/hide
Query:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC
        MAE+AGSSSSTSNPL LIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP TPCSQCQNP ENW+CLCCKDVFCSRFVNKHMLQHYEQSTHC
Subjt:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A1S3BZ94 histone deacetylase 66.8e-7896.62Show/hide
Query:  MAEEAGSSSSTSNPLPLI--IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MAEEAGSSSSTSN LPLI  IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP TPCSQCQNP ENWLCLCCKDVFCSRFVNKHMLQHYEQST
Subjt:  MAEEAGSSSSTSNPLPLI--IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A5A7TNA2 Histone deacetylase 62.0e-7795.95Show/hide
Query:  MAEEAGSSSSTSNPLPLI--IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MAEEAGSSSSTSN LPLI  IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP TPCSQCQNP ENWLCLCCKDVFCSRFVNKHMLQHYEQST
Subjt:  MAEEAGSSSSTSNPLPLI--IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGE PPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A6J1D695 histone deacetylase 61.2e-6382.88Show/hide
Query:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC
        MA EAGSSS  SN  P IIE+E EE+ L+GA +GWV+ALT CDHLASLSSDLAHIP P T CS+CQNP ENWLCLCCK++ CSRFVNKHMLQHY+QSTHC
Subjt:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LALSYSDLSVWCFSCDAYLDAQVIQELRPV+EVAYILKFGEAPPFR
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

SwissProt top hitse value%identityAlignment
Q20296 Histone deacetylase 68.4e-1735.37Show/hide
Query:  AEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPP----PHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQS
        +  +GSSSS++ P   +       E++    +  V  L +C HL     ++  +PP      T CS+CQ   E W CL C    C RFVN+H + H+  S
Subjt:  AEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPP----PHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQS

Query:  THCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP
        +H +ALS +DLSVWC+ CD+Y+       L      A+  KFGE  P
Subjt:  THCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP

Q54QE6 NAD-dependent deacetylase sir2A8.1e-1245Show/hide
Query:  TPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL
        T C  C + +ENW+C+ C  V CSR VN H  +H+E + H ++ S+SD S WC++CD Y+
Subjt:  TPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL

Q9H0E7 Ubiquitin carboxyl-terminal hydrolase 441.5e-1032.14Show/hide
Query:  ALTSCDHLA--SLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL
        A+ +C H+    L+ D + + P    C  C      W CL C  V C R++ +H L+H+++S+H +AL  +++ V+C+ CD Y+
Subjt:  ALTSCDHLA--SLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL

Q9UBN7 Histone deacetylase 65.8e-1842.2Show/hide
Query:  VQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAY
        V  L  C HL ++    A       PC  C    ENW+CL C  V+C R++N HMLQH+  S H L LSY DLS WC+ C AY+  Q + +   V  +A+
Subjt:  VQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAY

Query:  ILKFGEAPP
          KFGE  P
Subjt:  ILKFGEAPP

Q9Z2V5 Histone deacetylase 61.7e-1736.81Show/hide
Query:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC
        + E AG     S  L     D   +++ Y      V  L+ C HL ++    A       PC  C    ENW+CL C  V+CSR+VN HM+ H+E S H 
Subjt:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP
        L LS  DLS WC+ C AY+     ++L+ V   A+  KFGE  P
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP

Arabidopsis top hitse value%identityAlignment
AT2G14830.1 Regulator of Vps4 activity in the MVB pathway protein2.6e-1352.63Show/hide
Query:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLC
        MAE+A SSSS+S+P P  + DE ++ +L GAGSGWV+A  +CDHL +LS DL H+P P TPCS+ +  TE+    C
Subjt:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLC

AT2G14830.2 Regulator of Vps4 activity in the MVB pathway protein3.5e-5869.44Show/hide
Query:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC
        MAE+A SSSS+S+P P  + DE ++ +L GAGSGWV+A  +CDHL +LS DL H+P P TPCS+CQNP ENWLCLCCK+V CSRFVN+HML H++Q+ HC
Subjt:  MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP
        LALSYSDLSVWCF C+AYLDAQ+I +LRP+H+ AYILKFGEAPP
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP

AT2G26000.1 zinc finger (C3HC4-type RING finger) family protein1.1e-0631.75Show/hide
Query:  PPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL
        P ++ C  CQ     W+C+ C  V C R+   H  +H+E++ HC +L      VW ++ D Y+
Subjt:  PPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL

AT2G26000.2 zinc finger (C3HC4-type RING finger) family protein1.1e-0631.75Show/hide
Query:  PPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL
        P ++ C  CQ     W+C+ C  V C R+   H  +H+E++ HC +L      VW ++ D Y+
Subjt:  PPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAAGCCGGTTCATCCTCTTCCACTTCCAACCCACTGCCCCTCATAATCGAAGATGAAGTGGAGGAAGAACTCTTATACGGCGCCGGATCCGGATGGGTCCA
AGCTCTAACTTCTTGCGATCATCTCGCTTCCTTATCTTCCGACCTCGCTCACATTCCGCCCCCTCATACTCCCTGTAGCCAATGCCAGAATCCCACGGAGAACTGGCTGT
GTTTATGCTGTAAGGATGTCTTTTGTAGTCGTTTTGTGAATAAGCACATGCTTCAACATTATGAGCAATCAACTCATTGCCTTGCACTCAGCTACAGTGATTTGTCAGTT
TGGTGTTTCTCCTGCGACGCATATTTAGATGCACAAGTGATTCAGGAATTACGACCAGTACACGAAGTTGCCTACATACTGAAATTTGGCGAGGCCCCACCATTTCGATA
G
mRNA sequenceShow/hide mRNA sequence
GTTTCTTTTTCTCTTTGAAATTTACTTCTCAAATTAGACGCTGCAGAGTCGAAGGTAGTCGTGAAATTCTGTGTGCTCATCAATGGCGGAAGAAGCCGGTTCATCCTCTT
CCACTTCCAACCCACTGCCCCTCATAATCGAAGATGAAGTGGAGGAAGAACTCTTATACGGCGCCGGATCCGGATGGGTCCAAGCTCTAACTTCTTGCGATCATCTCGCT
TCCTTATCTTCCGACCTCGCTCACATTCCGCCCCCTCATACTCCCTGTAGCCAATGCCAGAATCCCACGGAGAACTGGCTGTGTTTATGCTGTAAGGATGTCTTTTGTAG
TCGTTTTGTGAATAAGCACATGCTTCAACATTATGAGCAATCAACTCATTGCCTTGCACTCAGCTACAGTGATTTGTCAGTTTGGTGTTTCTCCTGCGACGCATATTTAG
ATGCACAAGTGATTCAGGAATTACGACCAGTACACGAAGTTGCCTACATACTGAAATTTGGCGAGGCCCCACCATTTCGATAGTATTAATTCATCCTGCACTGGGGGAAC
TGAAATATCTGATTATTAGTGTTATAACTTTTCTAGTATCTACATGTTAGATGTTTTGATTTCTTGGTTTGTACATTTCAAGCAAATGGCTTATGATCTTCACATGAATT
GGGTTGGGTTGTCAAACGTTCATGGTAAGTTGGTTGTTCACTTTACAGAAGTGAGGGATAGATTAGAATCTCATATCTTGTTCAAGAAAATTATAAGAAGCTTTTACTTG
AAACTGACAAACTTCTTGTCAAACCTTGATGATAACATTTATGAAATTGGTTCCCCATCTTTGTCA
Protein sequenceShow/hide protein sequence
MAEEAGSSSSTSNPLPLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPHTPCSQCQNPTENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSV
WCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR