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PI0004220 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004220
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionF-box domain-containing protein
Genome locationchr08:4281007..4281282
RNA-Seq ExpressionPI0004220
SyntenyPI0004220
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily
IPR045118 - F-box only protein FBXO9/FBXO48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649458.1 hypothetical protein Csa_018875 [Cucumis sativus]5.4e-3581.32Show/hide
Query:  MASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYPPLFMSSSRSFETHLFPLRPCLRHRYDLLP
        MASCVCKSW IALASDHLWEPILAHNFP L N  VS TT SP  SFCRLFGLGH +ATHCYPPLFM+SSRS ET  F LR CLRHRYDLLP
Subjt:  MASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYPPLFMSSSRSFETHLFPLRPCLRHRYDLLP

XP_008449214.1 PREDICTED: probable F-box protein At5g04010 [Cucumis melo]1.5e-1368.85Show/hide
Query:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP
        ASCVCKSWS+++ASDHLWEPI   NFP LFN A S  T SPP+SF RLFGLG+IAA    P
Subjt:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP

XP_022925168.1 probable F-box protein At5g04010 [Cucurbita moschata]1.7e-1263.93Show/hide
Query:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP
        ASCVCKSWSI++AS++LWEPI +  FP L N A S  T SPP+SF RLFGLGH AA    P
Subjt:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP

XP_022966422.1 probable F-box protein At5g04010 [Cucurbita maxima]4.7e-1568.85Show/hide
Query:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP
        ASCVCKSWSI++AS+HLWEPI +  FP L N A S  T SPPLSFCRLFGLGH AA    P
Subjt:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP

XP_023518459.1 probable F-box protein At5g04010 [Cucurbita pepo subsp. pepo]1.7e-1263.93Show/hide
Query:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP
        ASCVCKSWSI++AS++LWEPI +  FP L N A S  T SPP+SF RLFGLGH AA    P
Subjt:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP

TrEMBL top hitse value%identityAlignment
A0A0A0LDE5 F-box domain-containing protein1.8e-1265.57Show/hide
Query:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP
        ASCVCKSWS+++ASDHLWEPI   NFP LFN A +  T SP +SF RLFGLG+IAA    P
Subjt:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP

A0A1S3BLJ1 probable F-box protein At5g040107.3e-1468.85Show/hide
Query:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP
        ASCVCKSWS+++ASDHLWEPI   NFP LFN A S  T SPP+SF RLFGLG+IAA    P
Subjt:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP

A0A5D3DEJ6 Putative F-box protein7.3e-1468.85Show/hide
Query:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP
        ASCVCKSWS+++ASDHLWEPI   NFP LFN A S  T SPP+SF RLFGLG+IAA    P
Subjt:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP

A0A6J1EEG3 probable F-box protein At5g040108.1e-1363.93Show/hide
Query:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP
        ASCVCKSWSI++AS++LWEPI +  FP L N A S  T SPP+SF RLFGLGH AA    P
Subjt:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP

A0A6J1HMX9 probable F-box protein At5g040102.3e-1568.85Show/hide
Query:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP
        ASCVCKSWSI++AS+HLWEPI +  FP L N A S  T SPPLSFCRLFGLGH AA    P
Subjt:  ASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTTGTGTGTGCAAGTCTTGGTCCATTGCCTTGGCCTCCGACCACCTTTGGGAGCCCATTTTAGCCCATAATTTTCCTTATCTCTTTAATAGCGCCGTCTCTTG
TACCACCATATCACCACCTCTCTCCTTTTGTCGCCTCTTCGGCCTTGGCCACATTGCCGCCACCCATTGTTATCCCCCATTATTTATGTCATCGTCTCGCTCCTTTGAAA
CTCACCTTTTTCCTCTTCGACCTTGTCTTCGCCATCGATACGATCTCCTCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCTTGTGTGTGCAAGTCTTGGTCCATTGCCTTGGCCTCCGACCACCTTTGGGAGCCCATTTTAGCCCATAATTTTCCTTATCTCTTTAATAGCGCCGTCTCTTG
TACCACCATATCACCACCTCTCTCCTTTTGTCGCCTCTTCGGCCTTGGCCACATTGCCGCCACCCATTGTTATCCCCCATTATTTATGTCATCGTCTCGCTCCTTTGAAA
CTCACCTTTTTCCTCTTCGACCTTGTCTTCGCCATCGATACGATCTCCTCCCTTGA
Protein sequenceShow/hide protein sequence
MASCVCKSWSIALASDHLWEPILAHNFPYLFNSAVSCTTISPPLSFCRLFGLGHIAATHCYPPLFMSSSRSFETHLFPLRPCLRHRYDLLP