; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004253 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004253
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein THYLAKOID ASSEMBLY 8, chloroplastic
Genome locationchr01:27786782..27787690
RNA-Seq ExpressionPI0004253
SyntenyPI0004253
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059315.1 uncharacterized protein E6C27_scaffold242G00390 [Cucumis melo var. makuwa]1.5e-10692.58Show/hide
Query:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER
        MASSL STFLKSQISIPIP STA AAVAVSF VRCGPRDNRGPLVKGRTLSIEAIQAIQ+LKRAERSDPTKLQQVLSTTLSRLLKADLVA LKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMI
        CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG DGVIEW +DDKGL+KLIKAVISG+RRESTVRIYRMMRRNGWGS+IK DDYMI
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMI

Query:  RVLSKGLRRLGEIELADEINREFQDLVGS
        +V+SKGLRR+GE+ELADEINREFQDLVGS
Subjt:  RVLSKGLRRLGEIELADEINREFQDLVGS

XP_004141838.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucumis sativus]6.8e-10792.61Show/hide
Query:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER
        MASSLHSTFLKSQISIPIP STA + VAVSF VRCGPRDNRGPLVKGRTLSIEAIQAIQ+LKRAERSDPTKLQQVLSTTLSRLLKADLVA LKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMI
        CALALEVFAVI+SEYRAELGLYAEVAAALSRNGAAEEIDRLV DLDGGDGVIEW +DDKGL+KLIKAVISG+RRESTVRIYRMMRR GWGS+IKADDYMI
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMI

Query:  RVLSKGLRRLGEIELADEINREFQDLVGSF
        +VLSKGLRRLGEIELADEINREF+DLVGSF
Subjt:  RVLSKGLRRLGEIELADEINREFQDLVGSF

XP_008462172.1 PREDICTED: uncharacterized protein LOC103500597 [Cucumis melo]2.0e-11489.68Show/hide
Query:  FFPQISARVLQSLQKKKPNLHTAMASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLS
        F P +S       +KKKPNLHTAMASSLHSTFLKSQISIPIP STA AAVAVSF VRCGPRDNRGPLVKGRTLSIEAIQAIQ+LKRAERSDPTKLQQVLS
Subjt:  FFPQISARVLQSLQKKKPNLHTAMASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLS

Query:  TTLSRLLKADLVAALKELLRQERCALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRREST
        TTLSRLLKADLVA LKELLRQERCALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG DGVIEW +DDKGL+KLIKAVISG+RREST
Subjt:  TTLSRLLKADLVAALKELLRQERCALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRREST

Query:  VRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDLVGS
        VRIYRMMRRNGWGS+IK DDYMI+V+SKGLRR+GEIELADEINREFQDLVGS
Subjt:  VRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDLVGS

XP_022954347.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucurbita moschata]2.7e-9583.84Show/hide
Query:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER
        MA SLHSTFLKSQI IPIP+S AAA V VS PVRCGPRDNRGPLVKGRTLS EAIQAIQ+LKRAE+SDPTKL+QVLSTTLSRLLKADLVA LKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIR
        CALALEVFAV+RSEY A+LG+YAEVAAALSRNGA EEIDRLVCDL+  D VI+  DDKGL+KLIKAVI GDRRESTVRIYRMM+R+GWGS IKADDY +R
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIR

Query:  VLSKGLRRLGEIELADEINREFQDLVGSF
        VLSKGLRRLGE+E+ADE+N +FQDLVGSF
Subjt:  VLSKGLRRLGEIELADEINREFQDLVGSF

XP_038898717.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Benincasa hispida]2.4e-10491.23Show/hide
Query:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER
        MASS+HSTFLKSQISIPIPVS AAAAVAVS PVRCGPRDNRGPLVKGRTLSIEAIQAIQ+LKRAERSDPTKLQQVLSTTLSRLLKADLVA+LKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIR
        CALALEVFAVIRSEY A+LG+YAEVAAALSRNGAAEEIDRLVCDLDGGD +I+W DDKGL+KLIKAVISGDRRESTVRIYRMMRRNGWGS IKADDY++R
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIR

Query:  VLSKGLRRLGEIELADEINREFQDLVGS
        VLSKGLRR GE+ELADEINREFQDLVG+
Subjt:  VLSKGLRRLGEIELADEINREFQDLVGS

TrEMBL top hitse value%identityAlignment
A0A0A0K6N6 Uncharacterized protein3.3e-10792.61Show/hide
Query:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER
        MASSLHSTFLKSQISIPIP STA + VAVSF VRCGPRDNRGPLVKGRTLSIEAIQAIQ+LKRAERSDPTKLQQVLSTTLSRLLKADLVA LKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMI
        CALALEVFAVI+SEYRAELGLYAEVAAALSRNGAAEEIDRLV DLDGGDGVIEW +DDKGL+KLIKAVISG+RRESTVRIYRMMRR GWGS+IKADDYMI
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMI

Query:  RVLSKGLRRLGEIELADEINREFQDLVGSF
        +VLSKGLRRLGEIELADEINREF+DLVGSF
Subjt:  RVLSKGLRRLGEIELADEINREFQDLVGSF

A0A1S3CGD3 uncharacterized protein LOC1035005979.6e-11589.68Show/hide
Query:  FFPQISARVLQSLQKKKPNLHTAMASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLS
        F P +S       +KKKPNLHTAMASSLHSTFLKSQISIPIP STA AAVAVSF VRCGPRDNRGPLVKGRTLSIEAIQAIQ+LKRAERSDPTKLQQVLS
Subjt:  FFPQISARVLQSLQKKKPNLHTAMASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLS

Query:  TTLSRLLKADLVAALKELLRQERCALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRREST
        TTLSRLLKADLVA LKELLRQERCALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG DGVIEW +DDKGL+KLIKAVISG+RREST
Subjt:  TTLSRLLKADLVAALKELLRQERCALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRREST

Query:  VRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDLVGS
        VRIYRMMRRNGWGS+IK DDYMI+V+SKGLRR+GEIELADEINREFQDLVGS
Subjt:  VRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDLVGS

A0A5A7V0E2 Uncharacterized protein7.3e-10792.58Show/hide
Query:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER
        MASSL STFLKSQISIPIP STA AAVAVSF VRCGPRDNRGPLVKGRTLSIEAIQAIQ+LKRAERSDPTKLQQVLSTTLSRLLKADLVA LKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMI
        CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG DGVIEW +DDKGL+KLIKAVISG+RRESTVRIYRMMRRNGWGS+IK DDYMI
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEW-EDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMI

Query:  RVLSKGLRRLGEIELADEINREFQDLVGS
        +V+SKGLRR+GE+ELADEINREFQDLVGS
Subjt:  RVLSKGLRRLGEIELADEINREFQDLVGS

A0A6J1GQS0 protein THYLAKOID ASSEMBLY 8, chloroplastic1.3e-9583.84Show/hide
Query:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER
        MA SLHSTFLKSQI IPIP+S AAA V VS PVRCGPRDNRGPLVKGRTLS EAIQAIQ+LKRAE+SDPTKL+QVLSTTLSRLLKADLVA LKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIR
        CALALEVFAV+RSEY A+LG+YAEVAAALSRNGA EEIDRLVCDL+  D VI+  DDKGL+KLIKAVI GDRRESTVRIYRMM+R+GWGS IKADDY +R
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIR

Query:  VLSKGLRRLGEIELADEINREFQDLVGSF
        VLSKGLRRLGE+E+ADE+N +FQDLVGSF
Subjt:  VLSKGLRRLGEIELADEINREFQDLVGSF

A0A6J1JTE8 protein THYLAKOID ASSEMBLY 8, chloroplastic1.7e-9583.84Show/hide
Query:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER
        MA SLHSTFLKSQI IPIP+S A A V VS PVRCGPRDNRGPLVKGRTLS EAIQAIQ+LKRAE+SDPTKL+QVLSTTLSRLLKADLVA LKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIR
        CALALEVFAV+RSEY  +LG+YAEVAAALSRNGA EEIDRLVCDL+  D VI+  DDKGL+KLIKAVI GDRRESTVRIYRMM+R+GWGS IKADDYM+R
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIR

Query:  VLSKGLRRLGEIELADEINREFQDLVGSF
        VLSKGLRRLGE+E+ADEIN +FQDLVGSF
Subjt:  VLSKGLRRLGEIELADEINREFQDLVGSF

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623501.2e-0526.97Show/hide
Query:  LSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG
        +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ +  L ++++ V+R E  YR ++  Y ++   L+RN   +E  ++  DL  
Subjt:  LSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG

Query:  GDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDL
         + +    D      L++  +  +     +R+Y  MR     S  +      RV+ KGL  +   EL +++  +F +L
Subjt:  GDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDL

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic5.0e-4453.12Show/hide
Query:  VRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTT---LSRLLKADLVAALKELLRQERCALALEVFAVIRSEY-RAELGLYAEVAAA
        +RCGPRDNRGPL+KGR LS EAIQ+IQ+LKRA R+  +     LS T   L RL+K+DL++ L+ELLRQ+ C LA+ V + +R+EY   +L LYA++  A
Subjt:  VRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTT---LSRLLKADLVAALKELLRQERCALALEVFAVIRSEY-RAELGLYAEVAAA

Query:  LSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGS-IIKADDYMIRVLSKGLRRLGEIELADEIN
        L+RN   +EIDRL+ ++DG D   +  DDK L KLI+AV+  +RRES VR+Y +MR +GWGS   +AD+Y+  VLSKGL RLGE +LA +++
Subjt:  LSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGS-IIKADDYMIRVLSKGLRRLGEIELADEIN

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.4e-0626.59Show/hide
Query:  RFFPQISARVLQSLQKKKPNLHTAMASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTL-SIEAIQAIQTLKRAERSDPTKLQQV
        R FP  ++   Q++  + P++H    S+L    L      PIP       V+     R      RGPL +G+ L   EA+  I  LKR  + D  KL + 
Subjt:  RFFPQISARVLQSLQKKKPNLHTAMASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTL-SIEAIQAIQTLKRAERSDPTKLQQV

Query:  LSTTLSRLLKADLVAALKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRR
        + T + RLLK D++A + EL RQE  ALA+++F VI+ +  Y+ ++ +Y ++  +L+++   +E   L   +   +    + D +   ++I+  +     
Subjt:  LSTTLSRLLKADLVAALKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRR

Query:  ESTVRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDL
           + +Y  M +    S    ++   RVL KGL  L    L +++ ++F++L
Subjt:  ESTVRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDL

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein8.5e-0726.97Show/hide
Query:  LSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG
        +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ +  L ++++ V+R E  YR ++  Y ++   L+RN   +E  ++  DL  
Subjt:  LSIEAIQAIQTLKRAERSDPTKLQQVLSTTLSRLLKADLVAALKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG

Query:  GDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDL
         + +    D      L++  +  +     +R+Y  MR     S  +      RV+ KGL  +   EL +++  +F +L
Subjt:  GDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDL

AT3G27750.1 FUNCTIONS IN: molecular_function unknown3.5e-4553.12Show/hide
Query:  VRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTT---LSRLLKADLVAALKELLRQERCALALEVFAVIRSEY-RAELGLYAEVAAA
        +RCGPRDNRGPL+KGR LS EAIQ+IQ+LKRA R+  +     LS T   L RL+K+DL++ L+ELLRQ+ C LA+ V + +R+EY   +L LYA++  A
Subjt:  VRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVLSTT---LSRLLKADLVAALKELLRQERCALALEVFAVIRSEY-RAELGLYAEVAAA

Query:  LSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGS-IIKADDYMIRVLSKGLRRLGEIELADEIN
        L+RN   +EIDRL+ ++DG D   +  DDK L KLI+AV+  +RRES VR+Y +MR +GWGS   +AD+Y+  VLSKGL RLGE +LA +++
Subjt:  LSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGS-IIKADDYMIRVLSKGLRRLGEIELADEIN

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein1.0e-0726.59Show/hide
Query:  RFFPQISARVLQSLQKKKPNLHTAMASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTL-SIEAIQAIQTLKRAERSDPTKLQQV
        R FP  ++   Q++  + P++H    S+L    L      PIP       V+     R      RGPL +G+ L   EA+  I  LKR  + D  KL + 
Subjt:  RFFPQISARVLQSLQKKKPNLHTAMASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTL-SIEAIQAIQTLKRAERSDPTKLQQV

Query:  LSTTLSRLLKADLVAALKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRR
        + T + RLLK D++A + EL RQE  ALA+++F VI+ +  Y+ ++ +Y ++  +L+++   +E   L   +   +    + D +   ++I+  +     
Subjt:  LSTTLSRLLKADLVAALKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRR

Query:  ESTVRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDL
           + +Y  M +    S    ++   RVL KGL  L    L +++ ++F++L
Subjt:  ESTVRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDL

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain3.1e-1732.85Show/hide
Query:  NRGPLVKGRTLSIEAIQAIQTLKRAE--------------RSDPTKLQQVLSTTLSRLLKADLVAALKELLRQERCALALEVFAVIRSE--YRAELGLYA
        NR PL +GR LSIEAIQA+Q LKRA                S    L +V+ +   RLLK D+VA L+ELLRQ  C+LAL+VF  IR E  Y+ ++ +Y 
Subjt:  NRGPLVKGRTLSIEAIQAIQTLKRAE--------------RSDPTKLQQVLSTTLSRLLKADLVAALKELLRQERCALALEVFAVIRSE--YRAELGLYA

Query:  EVAAALSRNGAAEEIDRLVCDLDGGDGV---IEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINR
        ++   ++ N   EE++ L   +    G+   IEW +      L+  +++    +  +  Y  M+  G+    + D    RVL  GL   GE+ L+  + +
Subjt:  EVAAALSRNGAAEEIDRLVCDLDGGDGV---IEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRNGWGSIIKADDYMIRVLSKGLRRLGEIELADEINR

Query:  EFQDLVG
        +  +  G
Subjt:  EFQDLVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCAAGCCCAAAGTTCCGATAATATTCGATTTTTCCCCCAAATCTCAGCAAGGGTATTACAGTCATTGCAAAAAAAAAAACCCAATCTCCACACCGCCATGGCCTC
TTCTCTTCACTCCACATTTCTCAAATCCCAAATCTCAATTCCGATCCCCGTCTCCACCGCTGCTGCCGCGGTCGCCGTTTCCTTTCCGGTACGGTGCGGCCCACGGGACA
ACCGAGGACCGCTAGTGAAAGGCAGAACCCTAAGCATCGAAGCAATCCAAGCAATTCAAACCCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAACAAGTCCTC
TCCACTACGCTCTCCCGATTGCTCAAAGCCGACCTCGTCGCCGCCTTAAAGGAGCTCCTCCGGCAGGAACGGTGCGCCCTAGCCTTGGAGGTTTTCGCCGTAATCAGATC
GGAGTACCGCGCCGAATTGGGGCTATACGCGGAGGTGGCGGCGGCGCTGTCAAGGAACGGTGCGGCGGAGGAAATCGACCGGCTGGTTTGCGATTTAGACGGTGGAGATG
GGGTGATTGAGTGGGAGGATGATAAGGGTTTGGTTAAGTTGATTAAGGCGGTGATTAGTGGGGATAGAAGGGAATCGACGGTCAGGATTTATCGAATGATGAGGAGAAAC
GGGTGGGGATCGATCATTAAAGCTGATGATTATATGATTAGGGTTTTGAGTAAGGGTTTAAGGAGGCTTGGGGAAATAGAGTTGGCTGATGAGATAAATAGGGAATTTCA
AGATTTAGTTGGCAGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
CATGAATGGGCCAAGCCCAAAGTTCCGATAATATTCGATTTTTCCCCCAAATCTCAGCAAGGGTATTACAGTCATTGCAAAAAAAAAAACCCAATCTCCACACCGCCATG
GCCTCTTCTCTTCACTCCACATTTCTCAAATCCCAAATCTCAATTCCGATCCCCGTCTCCACCGCTGCTGCCGCGGTCGCCGTTTCCTTTCCGGTACGGTGCGGCCCACG
GGACAACCGAGGACCGCTAGTGAAAGGCAGAACCCTAAGCATCGAAGCAATCCAAGCAATTCAAACCCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAACAAG
TCCTCTCCACTACGCTCTCCCGATTGCTCAAAGCCGACCTCGTCGCCGCCTTAAAGGAGCTCCTCCGGCAGGAACGGTGCGCCCTAGCCTTGGAGGTTTTCGCCGTAATC
AGATCGGAGTACCGCGCCGAATTGGGGCTATACGCGGAGGTGGCGGCGGCGCTGTCAAGGAACGGTGCGGCGGAGGAAATCGACCGGCTGGTTTGCGATTTAGACGGTGG
AGATGGGGTGATTGAGTGGGAGGATGATAAGGGTTTGGTTAAGTTGATTAAGGCGGTGATTAGTGGGGATAGAAGGGAATCGACGGTCAGGATTTATCGAATGATGAGGA
GAAACGGGTGGGGATCGATCATTAAAGCTGATGATTATATGATTAGGGTTTTGAGTAAGGGTTTAAGGAGGCTTGGGGAAATAGAGTTGGCTGATGAGATAAATAGGGAA
TTTCAAGATTTAGTTGGCAGTTTTTGAAATTTTTGTAAAATGTTTAATTATAATGTATTATTACATTTATATTTCTATTTAGTTAATCTAATTTGCTAAAGTTTGATATA
TAACATAAAGTTTTTTTTTTGTGATGTGA
Protein sequenceShow/hide protein sequence
MGQAQSSDNIRFFPQISARVLQSLQKKKPNLHTAMASSLHSTFLKSQISIPIPVSTAAAAVAVSFPVRCGPRDNRGPLVKGRTLSIEAIQAIQTLKRAERSDPTKLQQVL
STTLSRLLKADLVAALKELLRQERCALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGGDGVIEWEDDKGLVKLIKAVISGDRRESTVRIYRMMRRN
GWGSIIKADDYMIRVLSKGLRRLGEIELADEINREFQDLVGSF