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PI0004300 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004300
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr05:8894334..8895899
RNA-Seq ExpressionPI0004300
SyntenyPI0004300
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR005135 - Endonuclease/exonuclease/phosphatase
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026071.1 uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]7.2e-3354.36Show/hide
Query:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCL---------------------------
        GVVM DFNA RVHSEA+ G+PI  +ME+F+LAIR+AD VE   QGNWFTWTSKV GS  LRRLDR+LVN+  L                           
Subjt:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCL---------------------------

Query:  -QQRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK
             +VSFRF NHWVED SF +VV+ +W+R  GVSPLV LM NLH LK
Subjt:  -QQRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK

KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]4.4e-3849.5Show/hide
Query:  LGVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ-------------------------
        LGVVMGDFNA RVHSEA+GG+PI  +MEEFDLAIR+AD VE   QGNWFTWTSKV GS  LRRLDR+LVN++ L                          
Subjt:  LGVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ-------------------------

Query:  ---QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATK
              +VSFRF NHWVE+ SF +VV+ +W+R  GVS LVSLM NLH LK                           A REVER+P S   SR A LAT+
Subjt:  ---QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATK

Query:  AF
         F
Subjt:  AF

KAA0059841.1 reverse transcriptase [Cucumis melo var. makuwa]2.8e-3748.76Show/hide
Query:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ--------------------------
        GVVMGDFNA RVHSEA+GG+PI  +ME+FDLAIR+AD VE   QGNWFTWTSKV GS  LRRLDR+LVN+  L                           
Subjt:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ--------------------------

Query:  --QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATKA
             +VSFRF NHWVED SF +VV+ +W+R  GVSPLVSLM NLH LK                           A R+VER+  S   SR A LAT+ 
Subjt:  --QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATKA

Query:  F
        F
Subjt:  F

TYK28099.1 uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]7.2e-3354.36Show/hide
Query:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCL---------------------------
        GVVM DFNA RVHSEA+ G+PI  +ME+F+LAIR+AD VE   QGNWFTWTSKV GS  LRRLDR+LVN+  L                           
Subjt:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCL---------------------------

Query:  -QQRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK
             +VSFRF NHWVED SF +VV+ +W+R  GVSPLV LM NLH LK
Subjt:  -QQRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK

XP_008466769.1 PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]2.8e-3748.76Show/hide
Query:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ--------------------------
        GVVMGDFNA RVHSEA+GG+PI  +ME+FDLAIR+AD VE   QGNWFTWTSKV GS  LRRLDR+LVN+  L                           
Subjt:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ--------------------------

Query:  --QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATKA
             +VSFRF NHWVED SF +VV+ +W+R  GVSPLVSLM NLH LK                           A R+VER+  S   SR A LAT+ 
Subjt:  --QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATKA

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A1S3CRZ6 uncharacterized protein LOC1035041001.4e-3748.76Show/hide
Query:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ--------------------------
        GVVMGDFNA RVHSEA+GG+PI  +ME+FDLAIR+AD VE   QGNWFTWTSKV GS  LRRLDR+LVN+  L                           
Subjt:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ--------------------------

Query:  --QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATKA
             +VSFRF NHWVED SF +VV+ +W+R  GVSPLVSLM NLH LK                           A R+VER+  S   SR A LAT+ 
Subjt:  --QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATKA

Query:  F
        F
Subjt:  F

A0A5A7SPE5 Reverse transcriptase domain-containing protein3.5e-3354.36Show/hide
Query:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCL---------------------------
        GVVM DFNA RVHSEA+ G+PI  +ME+F+LAIR+AD VE   QGNWFTWTSKV GS  LRRLDR+LVN+  L                           
Subjt:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCL---------------------------

Query:  -QQRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK
             +VSFRF NHWVED SF +VV+ +W+R  GVSPLV LM NLH LK
Subjt:  -QQRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK

A0A5A7TZS0 Reverse transcriptase domain-containing protein2.1e-3849.5Show/hide
Query:  LGVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ-------------------------
        LGVVMGDFNA RVHSEA+GG+PI  +MEEFDLAIR+AD VE   QGNWFTWTSKV GS  LRRLDR+LVN++ L                          
Subjt:  LGVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ-------------------------

Query:  ---QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATK
              +VSFRF NHWVE+ SF +VV+ +W+R  GVS LVSLM NLH LK                           A REVER+P S   SR A LAT+
Subjt:  ---QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATK

Query:  AF
         F
Subjt:  AF

A0A5A7V275 Reverse transcriptase1.4e-3748.76Show/hide
Query:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ--------------------------
        GVVMGDFNA RVHSEA+GG+PI  +ME+FDLAIR+AD VE   QGNWFTWTSKV GS  LRRLDR+LVN+  L                           
Subjt:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCLQ--------------------------

Query:  --QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATKA
             +VSFRF NHWVED SF +VV+ +W+R  GVSPLVSLM NLH LK                           A R+VER+  S   SR A LAT+ 
Subjt:  --QRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK---------------------------AHREVERDPGSVERSRLARLATKA

Query:  F
        F
Subjt:  F

A0A5D3DXE4 Reverse transcriptase domain-containing protein3.5e-3354.36Show/hide
Query:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCL---------------------------
        GVVM DFNA RVHSEA+ G+PI  +ME+F+LAIR+AD VE   QGNWFTWTSKV GS  LRRLDR+LVN+  L                           
Subjt:  GVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFTWTSKVCGSWWLRRLDRILVNEQCL---------------------------

Query:  -QQRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK
             +VSFRF NHWVED SF +VV+ +W+R  GVSPLV LM NLH LK
Subjt:  -QQRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCACAAACAGTAGACCGGATACACTAATTAAGAATATCGGGCTCACGATTCGCACCACCATGGAGACGACGATTTCGCTCATTCTAGATAAAGATTTAGGATTTAC
ACCTATTATGAGTCCAGATGATGGTCCGTTGGGGATTTGTGTTGATTTAAGATCACTTATGGATGGTCGATTGGGTGTTGTCATGGGTGACTTTAATGCTACTCGTGTGC
ACTCTGAAGCTTATGGTGGGAATCCAATTCCTGATGATATGGAGGAGTTTGATCTTGCTATTCGTGAGGCTGACTCGGTGGAGTCGTTTTTTCAAGGTAACTGGTTCACT
TGGACGAGTAAGGTGTGTGGTTCTTGGTGGTTGCGTCGGCTTGATCGTATTTTGGTGAATGAGCAGTGTTTGCAGCAGAGGCATATTGTGTCGTTTCGGTTCCTTAACCA
TTGGGTGGAGGATACTTCATTCAATGATGTGGTGTCTTCGGTTTGGGCGAGAATGTTGGGTGTTTCTCCATTAGTGAGTCTTATGTGGAATTTGCATGACCTTAAGGCCC
ATCGGGAGGTTGAAAGGGATCCTGGGTCTGTTGAGAGGAGTCGTCTTGCTAGGCTAGCGACTAAGGCTTTTGGTCGGCCATCCGTCTGGAAGAAGCCTCTCTTCATCAGA
AATCTCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCACAAACAGTAGACCGGATACACTAATTAAGAATATCGGGCTCACGATTCGCACCACCATGGAGACGACGATTTCGCTCATTCTAGATAAAGATTTAGGATTTAC
ACCTATTATGAGTCCAGATGATGGTCCGTTGGGGATTTGTGTTGATTTAAGATCACTTATGGATGGTCGATTGGGTGTTGTCATGGGTGACTTTAATGCTACTCGTGTGC
ACTCTGAAGCTTATGGTGGGAATCCAATTCCTGATGATATGGAGGAGTTTGATCTTGCTATTCGTGAGGCTGACTCGGTGGAGTCGTTTTTTCAAGGTAACTGGTTCACT
TGGACGAGTAAGGTGTGTGGTTCTTGGTGGTTGCGTCGGCTTGATCGTATTTTGGTGAATGAGCAGTGTTTGCAGCAGAGGCATATTGTGTCGTTTCGGTTCCTTAACCA
TTGGGTGGAGGATACTTCATTCAATGATGTGGTGTCTTCGGTTTGGGCGAGAATGTTGGGTGTTTCTCCATTAGTGAGTCTTATGTGGAATTTGCATGACCTTAAGGCCC
ATCGGGAGGTTGAAAGGGATCCTGGGTCTGTTGAGAGGAGTCGTCTTGCTAGGCTAGCGACTAAGGCTTTTGGTCGGCCATCCGTCTGGAAGAAGCCTCTCTTCATCAGA
AATCTCTATTAA
Protein sequenceShow/hide protein sequence
MSTNSRPDTLIKNIGLTIRTTMETTISLILDKDLGFTPIMSPDDGPLGICVDLRSLMDGRLGVVMGDFNATRVHSEAYGGNPIPDDMEEFDLAIREADSVESFFQGNWFT
WTSKVCGSWWLRRLDRILVNEQCLQQRHIVSFRFLNHWVEDTSFNDVVSSVWARMLGVSPLVSLMWNLHDLKAHREVERDPGSVERSRLARLATKAFGRPSVWKKPLFIR
NLY