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PI0004322 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004322
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr03:12842625..12843239
RNA-Seq ExpressionPI0004322
SyntenyPI0004322
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]7.3e-0837.5Show/hide
Query:  RESEDATLA-PESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQT------ENQENNVAKENDDED--FYKYINEAIAKPMMDGLEDVFQNQANL
        +ESE+ TL          L++ IDDP  K  Q   E+A + R  SPPKQ+      + ++    +++DD+D  ++K+INE +++P+  G EDVFQ QANL
Subjt:  RESEDATLA-PESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQT------ENQENNVAKENDDED--FYKYINEAIAKPMMDGLEDVFQNQANL

Query:  QERAAKHEKQIVDLGTKIDN
        QE   +++K + DL  K D+
Subjt:  QERAAKHEKQIVDLGTKIDN

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]5.4e-1153.09Show/hide
Query:  GEMRASSPPKQTENQENNVAKENDDED-FYKYINEAIAKPMMDGLEDVFQNQANLQERAAKHEKQIVDLGTKIDNYHQSQQ
        GE  A  P KQ  NQ+ N A E+D+ED ++K+I +   KP+MDG +DVFQNQ +LQE   +HEKQI DL  KIDN +Q  Q
Subjt:  GEMRASSPPKQTENQENNVAKENDDED-FYKYINEAIAKPMMDGLEDVFQNQANLQERAAKHEKQIVDLGTKIDNYHQSQQ

TYK23898.1 gag-pol [Cucumis melo var. makuwa]1.5e-0845.05Show/hide
Query:  EDATLAPESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQTENQENNVAKENDDED-FYKYINEAIAKPMMDGLEDVFQNQANLQE
        E+ATL          +EP+DD   K  Q   E+ GE    SP KQT  Q++N  +E+DDED ++K+I++   KPMMD LED+FQ Q++LQE
Subjt:  EDATLAPESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQTENQENNVAKENDDED-FYKYINEAIAKPMMDGLEDVFQNQANLQE

TYK26456.1 hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa]8.1e-0743.82Show/hide
Query:  DEDFYKYINEAIAKPMMDGLEDVFQNQANLQERAAKHEKQIVDLGTKIDN---YHQSQQDQLAFEITSHKEQNKAMVSLIKKASLRSDK
        D++++K+I     KPM DG ED+FQ QANLQE   + +KQ+ +L  +IDN    HQ+Q D +  +I S K QN+A+ +LIK+AS ++++
Subjt:  DEDFYKYINEAIAKPMMDGLEDVFQNQANLQERAAKHEKQIVDLGTKIDN---YHQSQQDQLAFEITSHKEQNKAMVSLIKKASLRSDK

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]7.3e-0837.5Show/hide
Query:  RESEDATLA-PESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQT------ENQENNVAKENDDED--FYKYINEAIAKPMMDGLEDVFQNQANL
        +ESE+ TL          L++ IDDP  K  Q   E+A + R  SPPKQ+      + ++    +++DD+D  ++K+INE +++P+  G EDVFQ QANL
Subjt:  RESEDATLA-PESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQT------ENQENNVAKENDDED--FYKYINEAIAKPMMDGLEDVFQNQANL

Query:  QERAAKHEKQIVDLGTKIDN
        QE   +++K + DL  K D+
Subjt:  QERAAKHEKQIVDLGTKIDN

TrEMBL top hitse value%identityAlignment
A0A5A7TJU0 Uncharacterized protein3.6e-0837.5Show/hide
Query:  RESEDATLA-PESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQT------ENQENNVAKENDDED--FYKYINEAIAKPMMDGLEDVFQNQANL
        +ESE+ TL          L++ IDDP  K  Q   E+A + R  SPPKQ+      + ++    +++DD+D  ++K+INE +++P+  G EDVFQ QANL
Subjt:  RESEDATLA-PESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQT------ENQENNVAKENDDED--FYKYINEAIAKPMMDGLEDVFQNQANL

Query:  QERAAKHEKQIVDLGTKIDN
        QE   +++K + DL  K D+
Subjt:  QERAAKHEKQIVDLGTKIDN

A0A5A7U0L9 Uncharacterized protein2.6e-1153.09Show/hide
Query:  GEMRASSPPKQTENQENNVAKENDDED-FYKYINEAIAKPMMDGLEDVFQNQANLQERAAKHEKQIVDLGTKIDNYHQSQQ
        GE  A  P KQ  NQ+ N A E+D+ED ++K+I +   KP+MDG +DVFQNQ +LQE   +HEKQI DL  KIDN +Q  Q
Subjt:  GEMRASSPPKQTENQENNVAKENDDED-FYKYINEAIAKPMMDGLEDVFQNQANLQERAAKHEKQIVDLGTKIDNYHQSQQ

A0A5D3DK59 Gag-pol7.2e-0945.05Show/hide
Query:  EDATLAPESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQTENQENNVAKENDDED-FYKYINEAIAKPMMDGLEDVFQNQANLQE
        E+ATL          +EP+DD   K  Q   E+ GE    SP KQT  Q++N  +E+DDED ++K+I++   KPMMD LED+FQ Q++LQE
Subjt:  EDATLAPESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQTENQENNVAKENDDED-FYKYINEAIAKPMMDGLEDVFQNQANLQE

A0A5D3DS12 Uncharacterized protein3.9e-0743.82Show/hide
Query:  DEDFYKYINEAIAKPMMDGLEDVFQNQANLQERAAKHEKQIVDLGTKIDN---YHQSQQDQLAFEITSHKEQNKAMVSLIKKASLRSDK
        D++++K+I     KPM DG ED+FQ QANLQE   + +KQ+ +L  +IDN    HQ+Q D +  +I S K QN+A+ +LIK+AS ++++
Subjt:  DEDFYKYINEAIAKPMMDGLEDVFQNQANLQERAAKHEKQIVDLGTKIDN---YHQSQQDQLAFEITSHKEQNKAMVSLIKKASLRSDK

A0A5D3E1H0 Uncharacterized protein3.6e-0837.5Show/hide
Query:  RESEDATLA-PESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQT------ENQENNVAKENDDED--FYKYINEAIAKPMMDGLEDVFQNQANL
        +ESE+ TL          L++ IDDP  K  Q   E+A + R  SPPKQ+      + ++    +++DD+D  ++K+INE +++P+  G EDVFQ QANL
Subjt:  RESEDATLA-PESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQT------ENQENNVAKENDDED--FYKYINEAIAKPMMDGLEDVFQNQANL

Query:  QERAAKHEKQIVDLGTKIDN
        QE   +++K + DL  K D+
Subjt:  QERAAKHEKQIVDLGTKIDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACCTCAATGACACTGAGTTTGAAGATTATAGAGAATCAGAGGATGCGACGTTGGCCCCTGAGTCGCAGCAAATCATCTTTCTTGACGAGCCGATTGATGACCC
ACCTCCCAAGGAAAACCAAACAACCCTTGAGGAAGCTGGTGAGATGCGAGCTTCTTCGCCGCCAAAGCAAACTGAAAATCAAGAAAACAACGTGGCGAAAGAGAATGACG
ATGAAGATTTCTACAAGTACATCAATGAGGCAATCGCCAAGCCAATGATGGATGGACTTGAAGATGTTTTTCAAAACCAAGCCAATCTGCAAGAACGCGCGGCGAAACAT
GAGAAGCAGATTGTGGACTTGGGAACAAAAATAGACAACTACCATCAATCTCAACAAGATCAGCTCGCATTTGAAATCACGAGCCATAAAGAGCAAAACAAGGCGATGGT
GAGTTTGATCAAGAAGGCTTCCTTGCGGTCTGACAAACAATACAAGTCAATGATGAACTACATCCACACGGCCATCACAAGCCTCGTGCCTAAGCCTACCATTCCGCCTG
AATTCGAAGATCCCCTTTCTGACACTGAATTGGACGCGACAGGACCTTCCAAAACGCGGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACCTCAATGACACTGAGTTTGAAGATTATAGAGAATCAGAGGATGCGACGTTGGCCCCTGAGTCGCAGCAAATCATCTTTCTTGACGAGCCGATTGATGACCC
ACCTCCCAAGGAAAACCAAACAACCCTTGAGGAAGCTGGTGAGATGCGAGCTTCTTCGCCGCCAAAGCAAACTGAAAATCAAGAAAACAACGTGGCGAAAGAGAATGACG
ATGAAGATTTCTACAAGTACATCAATGAGGCAATCGCCAAGCCAATGATGGATGGACTTGAAGATGTTTTTCAAAACCAAGCCAATCTGCAAGAACGCGCGGCGAAACAT
GAGAAGCAGATTGTGGACTTGGGAACAAAAATAGACAACTACCATCAATCTCAACAAGATCAGCTCGCATTTGAAATCACGAGCCATAAAGAGCAAAACAAGGCGATGGT
GAGTTTGATCAAGAAGGCTTCCTTGCGGTCTGACAAACAATACAAGTCAATGATGAACTACATCCACACGGCCATCACAAGCCTCGTGCCTAAGCCTACCATTCCGCCTG
AATTCGAAGATCCCCTTTCTGACACTGAATTGGACGCGACAGGACCTTCCAAAACGCGGCTATAA
Protein sequenceShow/hide protein sequence
MQDLNDTEFEDYRESEDATLAPESQQIIFLDEPIDDPPPKENQTTLEEAGEMRASSPPKQTENQENNVAKENDDEDFYKYINEAIAKPMMDGLEDVFQNQANLQERAAKH
EKQIVDLGTKIDNYHQSQQDQLAFEITSHKEQNKAMVSLIKKASLRSDKQYKSMMNYIHTAITSLVPKPTIPPEFEDPLSDTELDATGPSKTRL