; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004326 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004326
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr03:4552488..4553311
RNA-Seq ExpressionPI0004326
SyntenyPI0004326
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064894.1 putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa]2.1e-14894.53Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV            GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVER+GVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_004138706.1 probable CCR4-associated factor 1 homolog 7 [Cucumis sativus]4.2e-14994.89Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV            GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVER+GVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_008445257.1 PREDICTED: LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7 [Cucumis melo]2.1e-14894.53Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV            GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVER+GVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_022951690.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]9.7e-13887.59Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESI+IREVWN N+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG+FKNIN+YNY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNI +DI+ASDSIELLR+CGIDFQK +EEGIDVN FGELLMSSGIV            GYDFGYLLKLLTCR+LP TQA FFDLI+MYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLM+FCNSFHGGLNKLAELLEVER+GVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_038886120.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]8.2e-14592.34Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWN NLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTL+ENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNIC+DIYASDSIELLRECGIDF+KT+EEGIDVNRF ELLMSSGIV            GYDFGYLLKLLTCRNLP+TQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVER+GVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

TrEMBL top hitse value%identityAlignment
A0A0A0LSM4 Poly(A)-specific ribonuclease2.0e-14994.89Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV            GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVER+GVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A1S3BD02 Poly(A)-specific ribonuclease1.0e-14894.53Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV            GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVER+GVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A5A7VC99 Poly(A)-specific ribonuclease1.0e-14894.53Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV            GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVER+GVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A6J1GJJ8 Poly(A)-specific ribonuclease4.7e-13887.59Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESI+IREVWN N+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG+FKNIN+YNY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNI +DI+ASDSIELLR+CGIDFQK +EEGIDVN FGELLMSSGIV            GYDFGYLLKLLTCR+LP TQA FFDLI+MYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLM+FCNSFHGGLNKLAELLEVER+GVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A6J1KLE0 Poly(A)-specific ribonuclease4.7e-13887.59Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESI+IREVWN N+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG+FKNIN+YNY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNI +DI+ASDSIELLR+CGIDFQK +EEGIDVN FGELLMSSGIV            GYDFGYLLKLLTCR+LP TQA FFDLI+MYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLM+FCNSFHGGLNKLAELLEVER+GVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

SwissProt top hitse value%identityAlignment
Q3ZC01 CCR4-NOT transcription complex subunit 73.3e-7251.49Show/hide
Query:  SINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI
        S  I EVW  NL+EE   IR+++ ++NY+AMDTEFPGVV RP+G F++  +Y Y+ LR NVD LK+IQLGLTF +E G  P  GT     WQFNF+ FN+
Subjt:  SINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI

Query:  CDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMRFCN
         +D+YA DSIELL   GI F+K  EEGI+   F ELLM+SG+V            GYDFGYL+K+LT  NLPE + +FF+++ ++FP++YD+K+LM+ C 
Subjt:  CDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMRFCN

Query:  SFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLGVETGQTTN
        +  GGL ++AE LE+ER+G  HQAGSDSLLT   F K+R+ FF       KY G LYGLG  +    N
Subjt:  SFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLGVETGQTTN

Q9LEU4 Probable CCR4-associated factor 1 homolog 104.3e-11273.13Show/hide
Query:  KGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVV++PV +FK  N+ NYRTL+ENVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMR
        FNI +DIYAS+SIELLR+CGIDF+K  E+GIDV RFGEL+MSSGIV            GYDFGYL+KLLTC+ LP  QA+FF L+++YFP VYDIKHLM 
Subjt:  FNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMR

Query:  FCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT
        FCN   GGLN+LAEL+ VERVG+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE G TT
Subjt:  FCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT

Q9S9P2 Probable CCR4-associated factor 1 homolog 28.9e-8659.09Show/hide
Query:  ESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNIN------EYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF
        ++I IREVWN NLE+E ALI + +D F Y+AMDTEFPG+V + V +  N N      EYNY TL+ NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQF
Subjt:  ESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNIN------EYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF

Query:  NFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIK
        NFREFN+  D++A DSIELLR+  ID +K +E G+D  RF ELLM SG+V            GYDFGYLLKLL+ + LPE  ++FFD +  +FP+VYDIK
Subjt:  NFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIK

Query:  HLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL
        +LM FC + +GGL K+AELL V+RVG+ HQAGSDSLLT  TF K+++ FF GS  KY+G L+GL
Subjt:  HLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.4e-11069.74Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWNDNL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREF++  DI+A DSIELL++ GID  K   +GID  RF ELLMSSGIV            GYDFGYLLKLLTC+NLP++Q +FF LI++YFP VYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLM+FCNS HGGLNKLAELLEVERVG+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

Q9SKZ2 Probable CCR4-associated factor 1 homolog 76.6e-11372.06Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVWNDNLE E ALIRE+VD F ++AMDTEFPG+V RPVG+FK   EY+Y TL+ NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYD
        QFNFREF++  DIYA+DSIELLR+ GIDF K +E GID  RF ELLMSSGIV            GYDFGYLLKLLTC+NLPETQ  FF++I +YFP VYD
Subjt:  QFNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYD

Query:  IKHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        IKHLM+FCNS HGGLNKLAELL+VERVG+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Subjt:  IKHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.7e-11269.74Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWNDNL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREF++  DI+A DSIELL++ GID  K   +GID  RF ELLMSSGIV            GYDFGYLLKLLTC+NLP++Q +FF LI++YFP VYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLM+FCNS HGGLNKLAELLEVERVG+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.7e-11269.74Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWNDNL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREF++  DI+A DSIELL++ GID  K   +GID  RF ELLMSSGIV            GYDFGYLLKLLTC+NLP++Q +FF LI++YFP VYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLM+FCNS HGGLNKLAELLEVERVG+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-11069.78Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWNDNL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREF++  DI+A DSIELL++ GID  K   +GID  RF ELLMSSGIV            GYDFGYLLKLLTC+NLP++Q +FF LI++YFP VYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE
        KHLM+FCNS HGGLNKLAELLEVERVG+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.7e-11472.06Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVWNDNLE E ALIRE+VD F ++AMDTEFPG+V RPVG+FK   EY+Y TL+ NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYD
        QFNFREF++  DIYA+DSIELLR+ GIDF K +E GID  RF ELLMSSGIV            GYDFGYLLKLLTC+NLPETQ  FF++I +YFP VYD
Subjt:  QFNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYD

Query:  IKHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        IKHLM+FCNS HGGLNKLAELL+VERVG+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Subjt:  IKHLMRFCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-11373.13Show/hide
Query:  KGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVV++PV +FK  N+ NYRTL+ENVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMR
        FNI +DIYAS+SIELLR+CGIDF+K  E+GIDV RFGEL+MSSGIV            GYDFGYL+KLLTC+ LP  QA+FF L+++YFP VYDIKHLM 
Subjt:  FNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIV------------GYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMR

Query:  FCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT
        FCN   GGLN+LAEL+ VERVG+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE G TT
Subjt:  FCNSFHGGLNKLAELLEVERVGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTGCCGAAAGGTGAATCGATTAATATCCGTGAGGTGTGGAACGATAATTTGGAGGAAGAATTTGCTCTTATACGTGAAATTGTCGACCAGTTTAACTACAT
AGCGATGGATACCGAGTTCCCTGGCGTGGTTGTTCGTCCTGTGGGTTCTTTTAAGAATATTAATGAGTATAACTACCGAACCCTCAGAGAGAATGTCGATACCTTAAAGT
TGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTTGTGAT
GATATTTATGCAAGTGATTCCATTGAGCTTTTGCGCGAGTGTGGTATTGATTTTCAGAAGACCCATGAGGAGGGAATTGATGTCAATCGCTTTGGTGAGCTTCTCATGTC
ATCTGGGATTGTCGGGTATGATTTTGGGTACTTGTTGAAATTGTTGACTTGCCGAAACTTACCAGAGACCCAGGCCGAATTTTTTGATTTGATCCATATGTACTTCCCAA
TGGTTTATGATATCAAGCATTTGATGAGGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGAAGTGGAGAGGGTTGGAGTTTGCCATCAAGCA
GGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGTTCTACACAGAAATATGCAGGTGTTTTATATGGTCTCGGTGTTGAAAC
TGGACAGACTACCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTGCCGAAAGGTGAATCGATTAATATCCGTGAGGTGTGGAACGATAATTTGGAGGAAGAATTTGCTCTTATACGTGAAATTGTCGACCAGTTTAACTACAT
AGCGATGGATACCGAGTTCCCTGGCGTGGTTGTTCGTCCTGTGGGTTCTTTTAAGAATATTAATGAGTATAACTACCGAACCCTCAGAGAGAATGTCGATACCTTAAAGT
TGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTTGTGAT
GATATTTATGCAAGTGATTCCATTGAGCTTTTGCGCGAGTGTGGTATTGATTTTCAGAAGACCCATGAGGAGGGAATTGATGTCAATCGCTTTGGTGAGCTTCTCATGTC
ATCTGGGATTGTCGGGTATGATTTTGGGTACTTGTTGAAATTGTTGACTTGCCGAAACTTACCAGAGACCCAGGCCGAATTTTTTGATTTGATCCATATGTACTTCCCAA
TGGTTTATGATATCAAGCATTTGATGAGGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGAAGTGGAGAGGGTTGGAGTTTGCCATCAAGCA
GGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGTTCTACACAGAAATATGCAGGTGTTTTATATGGTCTCGGTGTTGAAAC
TGGACAGACTACCAATTGA
Protein sequenceShow/hide protein sequence
MSILPKGESINIREVWNDNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICD
DIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERVGVCHQA
GSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN