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PI0004354 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004354
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr09:15545228..15545542
RNA-Seq ExpressionPI0004354
SyntenyPI0004354
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035629.1 retrotransposon protein [Cucumis melo var. makuwa]7.3e-2058.95Show/hide
Query:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR
        P+MYS GL+MSPDD+M  R+ R+SE R  SSG+KRKR G A ++  I+R+A+EY N+QL  IAEWP  QRQDAS TR E+VRQL+ I +L+ +DR
Subjt:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]5.4e-2365.31Show/hide
Query:  MENPTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR
        ME P MYSQG+DM  DDIM  R  R +E R GSSG+KRK+GGQA+E + IIR+ ME++ND+LKAI EW   QRQDAS   VEVVRQLQ I ELSR DR
Subjt:  MENPTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR

KAA0063726.1 retrotransposon protein [Cucumis melo var. makuwa]4.3e-2061.05Show/hide
Query:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR
        P MYSQGL+MSPDD+M  R+ R+SE R  SSG+KRKR G A ++  I+R+A+EY N+QL  IAEWP  QRQ+AS TR EVVRQL+ I EL  +DR
Subjt:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]8.6e-2158.59Show/hide
Query:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDRAVVC
        P MYS GL+MSPDD+M  R+ R+SE R  SSG+KRKR G A ++  I+R+A+EY N+QL  IAEWP  QRQDAS TR E+VRQL+ I EL+ +DR  +C
Subjt:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDRAVVC

TYK11924.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-2265.66Show/hide
Query:  MENPTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDRA
        ME PTMYS+GLDMS   I   R    +E R G S +K+K+GGQ++E V IIR+ MEYANDQLKAIAEWP  Q QDAS TR E VRQLQGI ELSRLD+A
Subjt:  MENPTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDRA

TrEMBL top hitse value%identityAlignment
A0A5A7V469 Retrotransposon protein2.6e-2365.31Show/hide
Query:  MENPTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR
        ME P MYSQG+DM  DDIM  R  R +E R GSSG+KRK+GGQA+E + IIR+ ME++ND+LKAI EW   QRQDAS   VEVVRQLQ I ELSR DR
Subjt:  MENPTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR

A0A5A7VBC5 Retrotransposon protein2.1e-2061.05Show/hide
Query:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR
        P MYSQGL+MSPDD+M  R+ R+SE R  SSG+KRKR G A ++  I+R+A+EY N+QL  IAEWP  QRQ+AS TR EVVRQL+ I EL  +DR
Subjt:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR

A0A5D3C1M0 Retrotransposon protein4.2e-2158.59Show/hide
Query:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDRAVVC
        P MYS GL+MSPDD+M  R+ R+SE R  SSG+KRKR G A ++  I+R+A+EY N+QL  IAEWP  QRQDAS TR E+VRQL+ I EL+ +DR  +C
Subjt:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDRAVVC

A0A5D3CL79 Retrotransposon protein7.6e-2365.66Show/hide
Query:  MENPTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDRA
        ME PTMYS+GLDMS   I   R    +E R G S +K+K+GGQ++E V IIR+ MEYANDQLKAIAEWP  Q QDAS TR E VRQLQGI ELSRLD+A
Subjt:  MENPTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDRA

A0A5D3E474 Retrotransposon protein3.5e-2058.95Show/hide
Query:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR
        P+MYS GL+MSPDD+M  R+ R+SE R  SSG+KRKR G A ++  I+R+A+EY N+QL  IAEWP  QRQDAS TR E+VRQL+ I +L+ +DR
Subjt:  PTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACCCGACGATGTACAGTCAGGGCCTGGACATGTCACCTGACGACATAATGACTCCACGATCGATTCGTATGTCTGAGGCTAGGCTTGGTTCGAGCGGGGCGAA
GAGGAAACGGGGAGGGCAGGCATTGGAGGCGGTAGCAATTATTCGCAGTGCCATGGAATATGCTAATGACCAACTTAAGGCCATTGCAGAATGGCCCAAAGAACAACGGC
AAGATGCAAGCGTGACACGTGTGGAAGTCGTTAGACAACTACAGGGAATCTCGGAGCTGAGTCGACTAGATAGGGCCGTTGTATGCACATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACCCGACGATGTACAGTCAGGGCCTGGACATGTCACCTGACGACATAATGACTCCACGATCGATTCGTATGTCTGAGGCTAGGCTTGGTTCGAGCGGGGCGAA
GAGGAAACGGGGAGGGCAGGCATTGGAGGCGGTAGCAATTATTCGCAGTGCCATGGAATATGCTAATGACCAACTTAAGGCCATTGCAGAATGGCCCAAAGAACAACGGC
AAGATGCAAGCGTGACACGTGTGGAAGTCGTTAGACAACTACAGGGAATCTCGGAGCTGAGTCGACTAGATAGGGCCGTTGTATGCACATATTGA
Protein sequenceShow/hide protein sequence
MENPTMYSQGLDMSPDDIMTPRSIRMSEARLGSSGAKRKRGGQALEAVAIIRSAMEYANDQLKAIAEWPKEQRQDASVTRVEVVRQLQGISELSRLDRAVVCTY