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PI0004359 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004359
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPectinesterase
Genome locationchr12:3038086..3039003
RNA-Seq ExpressionPI0004359
SyntenyPI0004359
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143502.1 pectinesterase-like [Momordica charantia]3.2e-2350.77Show/hide
Query:  IIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIV
        I+FN  VSLDG  +  +++   I++AP NS+ SRFYI IK   Y EH++++ QKTF  LIGD AATTV+VD+RS+ T F TS  A F V+ ++FMA+SI 
Subjt:  IIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIV

Query:  MENSAGSENAQAVAFFIDYAKFTVYYKNVY
         ENSAG  N QAVA   D A +  +Y+ V+
Subjt:  MENSAGSENAQAVAFFIDYAKFTVYYKNVY

XP_022150325.1 probable pectinesterase/pectinesterase inhibitor 44 [Momordica charantia]1.4e-2350Show/hide
Query:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF
        + F +S  FN  VSLDG+       V    +A  N S SRFYIH+KP  Y EHV++  QKTF ALIGD A+TT++VD+RS+ T F T+  A   V   +F
Subjt:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF

Query:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY
        MAQS+  +NSAG +  QAVA  +D AK TVYYK V+
Subjt:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY

XP_022151324.1 pectinesterase 2-like [Momordica charantia]1.4e-2350.74Show/hide
Query:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF
        + F +S  FN VVSLDG    +   V    +A  N   +RFYIHIKP IYKEHV++  QKTF ALIGD A+TT++VD+RS+ + F TS  A   VK  +F
Subjt:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF

Query:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY
        MAQS+  +NSAG    QA+A  +D AK T YYK V+
Subjt:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY

XP_023511662.1 probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita pepo subsp. pepo]5.4e-2353.23Show/hide
Query:  FNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVME
        FN VVSLDG  +  +++   IA+AP NS+ +RFYI + P  Y+ H++I   K F ALIGD A TT++VD+RSH T F T+  A  VV+ H+FMAQ +  E
Subjt:  FNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVME

Query:  NSAGSENAQAVAFFIDYAKFTVYY
        NSAG +N QAVA  +DYAK+TVYY
Subjt:  NSAGSENAQAVAFFIDYAKFTVYY

XP_038895889.1 putative pectinesterase/pectinesterase inhibitor 22 [Benincasa hispida]2.9e-3262.5Show/hide
Query:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF
        M+FV S  FN VVSLDG T    ++   IA+APSN  KSRFYIH+KP IYKEHV+I+K+KTF ALIGD AA T++VDSRSH T F T   A FVVK  +F
Subjt:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF

Query:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY
        MAQSI  ENSAG EN QAVA   + A  TVYYK V+
Subjt:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY

TrEMBL top hitse value%identityAlignment
A0A6J1CR03 Pectinesterase1.5e-2350.77Show/hide
Query:  IIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIV
        I+FN  VSLDG  +  +++   I++AP NS+ SRFYI IK   Y EH++++ QKTF  LIGD AATTV+VD+RS+ T F TS  A F V+ ++FMA+SI 
Subjt:  IIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIV

Query:  MENSAGSENAQAVAFFIDYAKFTVYYKNVY
         ENSAG  N QAVA   D A +  +Y+ V+
Subjt:  MENSAGSENAQAVAFFIDYAKFTVYYKNVY

A0A6J1D381 Pectinesterase3.4e-2350.36Show/hide
Query:  MSFVHSII-FNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHH
        + F H +I FN  VSLDG  + +  +   IA+AP+N S  RFYIH+KP IYKEH+++ + KTF +LIGD A+TTV+VD RS+   F T+  A F VK  H
Subjt:  MSFVHSII-FNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHH

Query:  FMAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY
        F+AQ +  +NSAG EN QAVA  +  A +T YYK V+
Subjt:  FMAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY

A0A6J1D863 Pectinesterase6.9e-2450Show/hide
Query:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF
        + F +S  FN  VSLDG+       V    +A  N S SRFYIH+KP  Y EHV++  QKTF ALIGD A+TT++VD+RS+ T F T+  A   V   +F
Subjt:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF

Query:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY
        MAQS+  +NSAG +  QAVA  +D AK TVYYK V+
Subjt:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY

A0A6J1DCN7 Pectinesterase6.9e-2450.74Show/hide
Query:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF
        + F +S  FN VVSLDG    +   V    +A  N   +RFYIHIKP IYKEHV++  QKTF ALIGD A+TT++VD+RS+ + F TS  A   VK  +F
Subjt:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF

Query:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY
        MAQS+  +NSAG    QA+A  +D AK T YYK V+
Subjt:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYYKNVY

A0A6J1HZD2 Pectinesterase3.4e-2352.27Show/hide
Query:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF
        ++ V  I FN VVSLDG  +  +++   IA+AP NS+ +RFYIH+ P IY+ H++I   K F ALIGD A TT++VD+RSH T F+TS  A  VV   +F
Subjt:  MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHF

Query:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYY
        MAQ +  ENSA  +N QAVA  +DYAK TVYY
Subjt:  MAQSIVMENSAGSENAQAVAFFIDYAKFTVYY

SwissProt top hitse value%identityAlignment
O49006 Pectinesterase/pectinesterase inhibitor 32.1e-0932.5Show/hide
Query:  VSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAG
        V+ DG +   + +   +A+AP NS+K R+ IHIK  +Y+E+V++ K+K     +GDG   T++  SR+      T + A        F+A+ I  +N+AG
Subjt:  VSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAG

Query:  SENAQAVAFFIDYAKFTVYY
            QAVA  +  + F+ +Y
Subjt:  SENAQAVAFFIDYAKFTVYY

Q42534 Pectinesterase 25.5e-1035.24Show/hide
Query:  IASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAGSENAQAVAFFIDYAKF
        +A+AP  S+K RF IHIK  +Y+E+V++ K+KT    +GDG   T++  SR+      T + A        F+A+ I  +N+AG    QAVA  +  + F
Subjt:  IASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAGSENAQAVAFFIDYAKF

Query:  TVYYK
        + +Y+
Subjt:  TVYYK

Q7Y201 Probable pectinesterase/pectinesterase inhibitor 132.9e-1138.6Show/hide
Query:  NNVVSLDG---LTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIV
        N  V+ DG    T I +AL      A     + R+ I++K  IY E+V +DK+K    ++GDG+  T+V  ++SH    RT   A FV +   FMAQS+ 
Subjt:  NNVVSLDG---LTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIV

Query:  MENSAGSENAQAVA
          N+AG E  QAVA
Subjt:  MENSAGSENAQAVA

Q9M9W7 Putative pectinesterase/pectinesterase inhibitor 226.5e-1133.61Show/hide
Query:  NNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMEN
        N VV++DG  +    +   I  AP++S+K R+ I++K  +YKE++ + K+KT   L+GDG   T++   R+      T   A   V    F+A+ I   N
Subjt:  NNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMEN

Query:  SAGSENAQAVAFFIDYAKFTVY
        +AG +N QAVA  +D  +   Y
Subjt:  SAGSENAQAVAFFIDYAKFTVY

Q9SMY6 Putative pectinesterase/pectinesterase inhibitor 451.9e-1044.58Show/hide
Query:  KSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAGSENAQAVA
        + R+ I+IK  IY E V IDK+K    ++GDG+  T+V  ++SH    RT   A FV +   FMAQS+   N+AG E  QAVA
Subjt:  KSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAGSENAQAVA

Arabidopsis top hitse value%identityAlignment
AT1G53830.1 pectin methylesterase 23.9e-1135.24Show/hide
Query:  IASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAGSENAQAVAFFIDYAKF
        +A+AP  S+K RF IHIK  +Y+E+V++ K+KT    +GDG   T++  SR+      T + A        F+A+ I  +N+AG    QAVA  +  + F
Subjt:  IASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAGSENAQAVAFFIDYAKF

Query:  TVYYK
        + +Y+
Subjt:  TVYYK

AT2G26450.1 Plant invertase/pectin methylesterase inhibitor superfamily2.1e-1238.6Show/hide
Query:  NNVVSLDG---LTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIV
        N  V+ DG    T I +AL      A     + R+ I++K  IY E+V +DK+K    ++GDG+  T+V  ++SH    RT   A FV +   FMAQS+ 
Subjt:  NNVVSLDG---LTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIV

Query:  MENSAGSENAQAVA
          N+AG E  QAVA
Subjt:  MENSAGSENAQAVA

AT3G05620.1 Plant invertase/pectin methylesterase inhibitor superfamily4.6e-1233.61Show/hide
Query:  NNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMEN
        N VV++DG  +    +   I  AP++S+K R+ I++K  +YKE++ + K+KT   L+GDG   T++   R+      T   A   V    F+A+ I   N
Subjt:  NNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMEN

Query:  SAGSENAQAVAFFIDYAKFTVY
        +AG +N QAVA  +D  +   Y
Subjt:  SAGSENAQAVAFFIDYAKFTVY

AT3G14310.1 pectin methylesterase 31.5e-1032.5Show/hide
Query:  VSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAG
        V+ DG +   + +   +A+AP NS+K R+ IHIK  +Y+E+V++ K+K     +GDG   T++  SR+      T + A        F+A+ I  +N+AG
Subjt:  VSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAG

Query:  SENAQAVAFFIDYAKFTVYY
            QAVA  +  + F+ +Y
Subjt:  SENAQAVAFFIDYAKFTVYY

AT4G33230.1 Plant invertase/pectin methylesterase inhibitor superfamily1.3e-1144.58Show/hide
Query:  KSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAGSENAQAVA
        + R+ I+IK  IY E V IDK+K    ++GDG+  T+V  ++SH    RT   A FV +   FMAQS+   N+AG E  QAVA
Subjt:  KSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENSAGSENAQAVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTTGTTCATAGCATTATTTTCAACAATGTTGTTTCTTTGGATGGACTAACCGAAATTTTAGAAGCATTAGTGAGGCCTATAGCATCTGCACCAAGTAACAGTAG
CAAATCTCGATTTTACATTCATATAAAACCTGAGATTTACAAAGAACACGTCAAAATCGATAAACAAAAGACTTTCGATGCGTTAATTGGCGACGGCGCTGCGACCACTG
TGGTTGTTGATAGTAGAAGCCATACTACTTGTTTTCGCACCTCTTATTGTGCAATATTCGTTGTGAAGGACCATCACTTTATGGCGCAGTCCATTGTAATGGAAAATTCT
GCGGGATCAGAAAACGCTCAAGCCGTAGCCTTTTTCATCGACTATGCCAAATTTACAGTATACTACAAAAATGTGTATTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTTGTTCATAGCATTATTTTCAACAATGTTGTTTCTTTGGATGGACTAACCGAAATTTTAGAAGCATTAGTGAGGCCTATAGCATCTGCACCAAGTAACAGTAG
CAAATCTCGATTTTACATTCATATAAAACCTGAGATTTACAAAGAACACGTCAAAATCGATAAACAAAAGACTTTCGATGCGTTAATTGGCGACGGCGCTGCGACCACTG
TGGTTGTTGATAGTAGAAGCCATACTACTTGTTTTCGCACCTCTTATTGTGCAATATTCGTTGTGAAGGACCATCACTTTATGGCGCAGTCCATTGTAATGGAAAATTCT
GCGGGATCAGAAAACGCTCAAGCCGTAGCCTTTTTCATCGACTATGCCAAATTTACAGTATACTACAAAAATGTGTATTTCTGA
Protein sequenceShow/hide protein sequence
MSFVHSIIFNNVVSLDGLTEILEALVRPIASAPSNSSKSRFYIHIKPEIYKEHVKIDKQKTFDALIGDGAATTVVVDSRSHTTCFRTSYCAIFVVKDHHFMAQSIVMENS
AGSENAQAVAFFIDYAKFTVYYKNVYF