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PI0004363 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004363
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr03:15257885..15258088
RNA-Seq ExpressionPI0004363
SyntenyPI0004363
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038053.1 uncharacterized protein E6C27_scaffold36G002560 [Cucumis melo var. makuwa]8.3e-1766.67Show/hide
Query:  KFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE
        +FP+D E+ +AIESL WDYCEE+V+ +LF+ EEFFEEED +YILKEVN+VSGER  E L++QTKG+
Subjt:  KFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE

KAA0040570.1 uncharacterized protein E6C27_scaffold262G001400 [Cucumis melo var. makuwa]1.4e-1667.69Show/hide
Query:  FPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE
        FP D ESCNAIE LGWDYCEE+ + +LFS +EF EE+ P YILKEVN VSG+ K E L++QTKGE
Subjt:  FPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE

KAA0047821.1 uncharacterized protein E6C27_scaffold133G00730 [Cucumis melo var. makuwa]1.1e-1669.23Show/hide
Query:  MKFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTK
        MKFPSD ++ N I+ LGWDYCEE+VF+KLFS EEFFE+E+P  IL+EVNVVS  RKL+PL++QTK
Subjt:  MKFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTK

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]3.1e-1664.62Show/hide
Query:  FPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE
        FP+D E+CN IE LGW+Y E++ + +LFS EEFFEE+DP+YILKEVNVVS E+K E L++Q KGE
Subjt:  FPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE

TYK25882.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]2.0e-1872.73Show/hide
Query:  MKFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKG
        MKFPS+ E+CNAI+SLGWDYCEE+V +KLF PEEFF+EED  YI KEVNVVSG RK E  + QTKG
Subjt:  MKFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKG

TrEMBL top hitse value%identityAlignment
A0A5A7T4Y2 Uncharacterized protein4.0e-1766.67Show/hide
Query:  KFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE
        +FP+D E+ +AIESL WDYCEE+V+ +LF+ EEFFEEED +YILKEVN+VSGER  E L++QTKG+
Subjt:  KFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE

A0A5A7U2P4 Integrase catalytic domain-containing protein5.2e-1769.23Show/hide
Query:  MKFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTK
        MKFPSD ++ N I+ LGWDYCEE+VF+KLFS EEFFE+E+P  IL+EVNVVS  RKL+PL++QTK
Subjt:  MKFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTK

A0A5A7UF79 Uncharacterized protein1.5e-1664.62Show/hide
Query:  FPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE
        FP+D E+CN IE LGW+Y E++ + +LFS EEFFEE+DP+YILKEVNVVS E+K E L++Q KGE
Subjt:  FPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein6.8e-1767.69Show/hide
Query:  FPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE
        FP D ESCNAIE LGWDYCEE+ + +LFS +EF EE+ P YILKEVN VSG+ K E L++QTKGE
Subjt:  FPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE

A0A5D3DQS7 Transposon Ty3-G Gag-Pol polyprotein9.5e-1972.73Show/hide
Query:  MKFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKG
        MKFPS+ E+CNAI+SLGWDYCEE+V +KLF PEEFF+EED  YI KEVNVVSG RK E  + QTKG
Subjt:  MKFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCCCCTCTGATGGTGAGAGCTGTAACGCAATAGAATCCCTTGGATGGGATTATTGCGAGGAAAAAGTGTTTTCTAAACTATTCAGCCCTGAAGAATTCTTTGA
AGAGGAAGACCCCAATTACATTCTGAAAGAAGTGAACGTCGTGTCTGGTGAAAGGAAATTAGAGCCTTTGAATATGCAAACCAAAGGCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTCCCCTCTGATGGTGAGAGCTGTAACGCAATAGAATCCCTTGGATGGGATTATTGCGAGGAAAAAGTGTTTTCTAAACTATTCAGCCCTGAAGAATTCTTTGA
AGAGGAAGACCCCAATTACATTCTGAAAGAAGTGAACGTCGTGTCTGGTGAAAGGAAATTAGAGCCTTTGAATATGCAAACCAAAGGCGAGTAG
Protein sequenceShow/hide protein sequence
MKFPSDGESCNAIESLGWDYCEEKVFSKLFSPEEFFEEEDPNYILKEVNVVSGERKLEPLNMQTKGE