; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004369 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004369
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr01:18029231..18030823
RNA-Seq ExpressionPI0004369
SyntenyPI0004369
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]1.1e-3444.67Show/hide
Query:  IRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFF
        IR  VV  FY A +N EE   ++  K V F  +AINALY L NN    G L  E+P  R  ++ALE I W G  W+  PT KYQL+P+ L TE SVWL F
Subjt:  IRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFF

Query:  IKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFLSAIQTISIPGGLCNQMALNRMITFHGHK
        IKK I PTRHDSTI++E  MLLY      + N  E+    ++AW++ P GA PF    + L +K  P L   Q + +  G+C    L+R IT H +K
Subjt:  IKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFLSAIQTISIPGGLCNQMALNRMITFHGHK

KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]1.6e-4339.04Show/hide
Query:  AVKAALKRNKEKKKMF-AELSEQVAELPAKARALEPERNLDAIIEEFEEKLEAMSPLDD---GPSPRKSREVTGPS----RGRKKLGRSGPEERLSGGDT
        A KA  K  K KK++   ++  Q  +  A+ +    E+  D   +EFE++LE +SPL+D      P+K R + G        + K  +   E + S  + 
Subjt:  AVKAALKRNKEKKKMF-AELSEQVAELPAKARALEPERNLDAIIEEFEEKLEAMSPLDD---GPSPRKSREVTGPS----RGRKKLGRSGPEERLSGGDT

Query:  ISKTPSINSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDL-PNNVETPGQLYV
        +     +     +EKG+FPF GQLP FL +PI+A  WK FF+G T IR  V+  FY   +N E     + GK V+F  + +N LY L    VE P     
Subjt:  ISKTPSINSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDL-PNNVETPGQLYV

Query:  ESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWM
        + P+    + ALE +AW G  W++TP  KYQL+PH L T ASVWL FIKK + PTRHD+TI+LE  MLLYCI+ +  +N+ E+I   I AW+
Subjt:  ESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWM

KAA0049609.1 transposase [Cucumis melo var. makuwa]2.0e-3350.31Show/hide
Query:  ISGKTVSFNVEAINALYDLPNNVET-PGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAML
        +  + V F  E IN LYDLPN++   PGQ  +    +  A++ +++I W  A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++
Subjt:  ISGKTVSFNVEAINALYDLPNNVET-PGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAML

Query:  LYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVV-PFLSAIQTISIPGGLCN
        LYCI AKK  NLG ++  + L+WMR PK A PFP+TV+ LCLK +      I  I + GG CN
Subjt:  LYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVV-PFLSAIQTISIPGGLCN

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]5.7e-3635.79Show/hide
Query:  EEF-EEKLEAMSPLDDGPSPRKSREVTGPSRGRKKLGRSGPEERLSGGDTISKTPSINSL-----IKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHT
        +EF EE    +SPL++    R+ R+      G+  + R   E+     ++      + S        VEKG F F  QL  FL  PI+A GW+ F +G  
Subjt:  EEF-EEKLEAMSPLDDGPSPRKSREVTGPSRGRKKLGRSGPEERLSGGDTISKTPSINSL-----IKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHT

Query:  KIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLF
         IR GVV+ FY  K++ E+    +  +                             P+    +EALE +AW+   W+VT   KY+L+ H LTTEASVWL 
Subjt:  KIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLF

Query:  FIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFL-SAIQTISIPGGLCN
        FIKKK+ PTRHD+TI+ E  MLLYCI+ +  V++ E+I   I AW++ P+GA PFP  +E LCL+    L  + Q   +  G+CN
Subjt:  FIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFL-SAIQTISIPGGLCN

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-4151.67Show/hide
Query:  KIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTG-KYQLYPHQLTTEASVWL
        KIR+ VV KFY  K N  +  + I  +   FNVE IN LY+ PN+ E  GQ  V   TK +A+EAL+V+AW G   EV P   +YQLYPH LTT+A+VW+
Subjt:  KIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTG-KYQLYPHQLTTEASVWL

Query:  FFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFLSAIQTISIP
        FF K KIFPT +DSTI+++  ++LYCI+ KK +NL E+I  +IL WM  PK AMPFPS +E LCLK +P L      +IP
Subjt:  FFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFLSAIQTISIP

TrEMBL top hitse value%identityAlignment
A0A5A7TZE0 Protein MNN4-like8.0e-4439.04Show/hide
Query:  AVKAALKRNKEKKKMF-AELSEQVAELPAKARALEPERNLDAIIEEFEEKLEAMSPLDD---GPSPRKSREVTGPS----RGRKKLGRSGPEERLSGGDT
        A KA  K  K KK++   ++  Q  +  A+ +    E+  D   +EFE++LE +SPL+D      P+K R + G        + K  +   E + S  + 
Subjt:  AVKAALKRNKEKKKMF-AELSEQVAELPAKARALEPERNLDAIIEEFEEKLEAMSPLDD---GPSPRKSREVTGPS----RGRKKLGRSGPEERLSGGDT

Query:  ISKTPSINSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDL-PNNVETPGQLYV
        +     +     +EKG+FPF GQLP FL +PI+A  WK FF+G T IR  V+  FY   +N E     + GK V+F  + +N LY L    VE P     
Subjt:  ISKTPSINSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDL-PNNVETPGQLYV

Query:  ESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWM
        + P+    + ALE +AW G  W++TP  KYQL+PH L T ASVWL FIKK + PTRHD+TI+LE  MLLYCI+ +  +N+ E+I   I AW+
Subjt:  ESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWM

A0A5A7U806 Transposase9.8e-3450.31Show/hide
Query:  ISGKTVSFNVEAINALYDLPNNVET-PGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAML
        +  + V F  E IN LYDLPN++   PGQ  +    +  A++ +++I W  A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++
Subjt:  ISGKTVSFNVEAINALYDLPNNVET-PGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAML

Query:  LYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVV-PFLSAIQTISIPGGLCN
        LYCI AKK  NLG ++  + L+WMR PK A PFP+TV+ LCLK +      I  I + GG CN
Subjt:  LYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVV-PFLSAIQTISIPGGLCN

A0A5A7V6M5 Gag/pol protein9.8e-4251.67Show/hide
Query:  KIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTG-KYQLYPHQLTTEASVWL
        KIR+ VV KFY  K N  +  + I  +   FNVE IN LY+ PN+ E  GQ  V   TK +A+EAL+V+AW G   EV P   +YQLYPH LTT+A+VW+
Subjt:  KIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTG-KYQLYPHQLTTEASVWL

Query:  FFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFLSAIQTISIP
        FF K KIFPT +DSTI+++  ++LYCI+ KK +NL E+I  +IL WM  PK AMPFPS +E LCLK +P L      +IP
Subjt:  FFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFLSAIQTISIP

A0A5D3CW17 Uncharacterized protein5.2e-3544.67Show/hide
Query:  IRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFF
        IR  VV  FY A +N EE   ++  K V F  +AINALY L NN    G L  E+P  R  ++ALE I W G  W+  PT KYQL+P+ L TE SVWL F
Subjt:  IRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFF

Query:  IKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFLSAIQTISIPGGLCNQMALNRMITFHGHK
        IKK I PTRHDSTI++E  MLLY      + N  E+    ++AW++ P GA PF    + L +K  P L   Q + +  G+C    L+R IT H +K
Subjt:  IKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFLSAIQTISIPGGLCNQMALNRMITFHGHK

A0A5D3DVQ6 Uncharacterized protein2.8e-3635.79Show/hide
Query:  EEF-EEKLEAMSPLDDGPSPRKSREVTGPSRGRKKLGRSGPEERLSGGDTISKTPSINSL-----IKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHT
        +EF EE    +SPL++    R+ R+      G+  + R   E+     ++      + S        VEKG F F  QL  FL  PI+A GW+ F +G  
Subjt:  EEF-EEKLEAMSPLDDGPSPRKSREVTGPSRGRKKLGRSGPEERLSGGDTISKTPSINSL-----IKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHT

Query:  KIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLF
         IR GVV+ FY  K++ E+    +  +                             P+    +EALE +AW+   W+VT   KY+L+ H LTTEASVWL 
Subjt:  KIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLF

Query:  FIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFL-SAIQTISIPGGLCN
        FIKKK+ PTRHD+TI+ E  MLLYCI+ +  V++ E+I   I AW++ P+GA PFP  +E LCL+    L  + Q   +  G+CN
Subjt:  FIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKVVPFL-SAIQTISIPGGLCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGATCTTCAAATCAAGATCAGATTAGAGTACGTTCTGATGGACCTGAATCAGAACGACCCACATCGCGGGCAAGTGGCGAACACAAAACGCCACAATACATCCA
CTTGAAGCACGGCAAGGGGAAGGTTCTACTGAAACCTCCGCCGAAAGCAGCTGACAATTTTTTGGAAGTTGAAGTTGATAATCAGGATACAGAGGCGGTGCTCGAATTCC
TTAATGAACGAGCAAAGAAGAGGAAGGAAGCCCACATTAAAAGAACTAAGGAAGCTCGTCGCCGAAAGGACGAGCGTGAGCGAACGAGAGTTGACACAATTCGAAAGGCG
AAGAGCACCTTAGAAATACGCTCATCGCCTAACGAGATTACAGAGCTTCACAAGAAAATCTCTGACAAGCTCGCACAAGTCTCGTTCGCTAAAACGAGGAAAACTATCGA
GGCAGTTAAGGCTGCCTTAAAAAGGAATAAAGAAAAGAAAAAGATGTTCGCAGAGTTGAGCGAACAAGTGGCGGAGCTCCCCGCGAAAGCAAGAGCATTGGAGCCGGAAA
GAAACCTCGACGCAATCATTGAAGAATTCGAGGAAAAGCTGGAGGCCATGAGCCCACTTGATGACGGGCCATCGCCAAGAAAATCAAGGGAGGTCACAGGACCATCAAGA
GGAAGAAAGAAACTTGGACGTTCTGGACCTGAAGAACGCCTATCAGGCGGCGACACCATAAGCAAGACACCCTCTATCAACTCTCTCATCAAAGTTGAAAAGGGGTTGTT
TCCGTTCAATGGTCAACTCCCTGACTTCCTCTACGCGCCAATTCAGGCGTTCGGATGGAAGTCATTTTTCAAGGGGCACACCAAGATACGATTAGGAGTGGTAGAAAAAT
TCTACGCGGCTAAACTCAACGCTGAAGAATTTAGCGTACAAATCAGTGGAAAGACAGTGAGTTTCAACGTGGAGGCCATCAATGCGTTGTATGATTTGCCCAACAACGTT
GAAACCCCAGGGCAATTATACGTAGAAAGTCCTACGAAGAGGATGGCCCGTGAAGCGTTGGAAGTCATCGCATGGTCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAA
GTATCAGTTGTATCCACACCAACTAACCACTGAAGCAAGTGTGTGGCTATTCTTTATCAAGAAGAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAGTCAG
CGATGCTACTCTATTGCATCCTAGCAAAGAAGCGTGTTAACCTTGGCGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCT
TCAACCGTTGAGGCCCTTTGCCTTAAAGTTGTGCCATTCTTATCCGCCATCCAAACCATCTCAATACCTGGCGGACTGTGTAATCAAATGGCCTTAAACCGCATGATTAC
TTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATTAGGCGACACACCTGAAGGAATGGCCCTAGCAGAAAGAAAAAGAAAGGCCCCACTTGTCGCATCAACCC
CCCCACCTAAAGCCAAAAAACAAAGGTTATTGCGACGAAGCAACTTCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGATCTTCAAATCAAGATCAGATTAGAGTACGTTCTGATGGACCTGAATCAGAACGACCCACATCGCGGGCAAGTGGCGAACACAAAACGCCACAATACATCCA
CTTGAAGCACGGCAAGGGGAAGGTTCTACTGAAACCTCCGCCGAAAGCAGCTGACAATTTTTTGGAAGTTGAAGTTGATAATCAGGATACAGAGGCGGTGCTCGAATTCC
TTAATGAACGAGCAAAGAAGAGGAAGGAAGCCCACATTAAAAGAACTAAGGAAGCTCGTCGCCGAAAGGACGAGCGTGAGCGAACGAGAGTTGACACAATTCGAAAGGCG
AAGAGCACCTTAGAAATACGCTCATCGCCTAACGAGATTACAGAGCTTCACAAGAAAATCTCTGACAAGCTCGCACAAGTCTCGTTCGCTAAAACGAGGAAAACTATCGA
GGCAGTTAAGGCTGCCTTAAAAAGGAATAAAGAAAAGAAAAAGATGTTCGCAGAGTTGAGCGAACAAGTGGCGGAGCTCCCCGCGAAAGCAAGAGCATTGGAGCCGGAAA
GAAACCTCGACGCAATCATTGAAGAATTCGAGGAAAAGCTGGAGGCCATGAGCCCACTTGATGACGGGCCATCGCCAAGAAAATCAAGGGAGGTCACAGGACCATCAAGA
GGAAGAAAGAAACTTGGACGTTCTGGACCTGAAGAACGCCTATCAGGCGGCGACACCATAAGCAAGACACCCTCTATCAACTCTCTCATCAAAGTTGAAAAGGGGTTGTT
TCCGTTCAATGGTCAACTCCCTGACTTCCTCTACGCGCCAATTCAGGCGTTCGGATGGAAGTCATTTTTCAAGGGGCACACCAAGATACGATTAGGAGTGGTAGAAAAAT
TCTACGCGGCTAAACTCAACGCTGAAGAATTTAGCGTACAAATCAGTGGAAAGACAGTGAGTTTCAACGTGGAGGCCATCAATGCGTTGTATGATTTGCCCAACAACGTT
GAAACCCCAGGGCAATTATACGTAGAAAGTCCTACGAAGAGGATGGCCCGTGAAGCGTTGGAAGTCATCGCATGGTCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAA
GTATCAGTTGTATCCACACCAACTAACCACTGAAGCAAGTGTGTGGCTATTCTTTATCAAGAAGAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAGTCAG
CGATGCTACTCTATTGCATCCTAGCAAAGAAGCGTGTTAACCTTGGCGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCT
TCAACCGTTGAGGCCCTTTGCCTTAAAGTTGTGCCATTCTTATCCGCCATCCAAACCATCTCAATACCTGGCGGACTGTGTAATCAAATGGCCTTAAACCGCATGATTAC
TTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATTAGGCGACACACCTGAAGGAATGGCCCTAGCAGAAAGAAAAAGAAAGGCCCCACTTGTCGCATCAACCC
CCCCACCTAAAGCCAAAAAACAAAGGTTATTGCGACGAAGCAACTTCCACTAA
Protein sequenceShow/hide protein sequence
MAGSSNQDQIRVRSDGPESERPTSRASGEHKTPQYIHLKHGKGKVLLKPPPKAADNFLEVEVDNQDTEAVLEFLNERAKKRKEAHIKRTKEARRRKDERERTRVDTIRKA
KSTLEIRSSPNEITELHKKISDKLAQVSFAKTRKTIEAVKAALKRNKEKKKMFAELSEQVAELPAKARALEPERNLDAIIEEFEEKLEAMSPLDDGPSPRKSREVTGPSR
GRKKLGRSGPEERLSGGDTISKTPSINSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEFSVQISGKTVSFNVEAINALYDLPNNV
ETPGQLYVESPTKRMAREALEVIAWSGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFP
STVEALCLKVVPFLSAIQTISIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTPEGMALAERKRKAPLVASTPPPKAKKQRLLRRSNFH