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PI0004378 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004378
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBHLH domain-containing protein
Genome locationchr05:252298..253188
RNA-Seq ExpressionPI0004378
SyntenyPI0004378
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044658 - Transcription factor bHLH92/bHLH041-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459381.1 PREDICTED: putative transcription factor bHLH041 isoform X1 [Cucumis melo]6.0e-5485.82Show/hide
Query:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN--LVPGHAFKNKISF
        MEIVFS NQDARAS LHSIMQS  S+Y+CLWSYLPHPSNCLMNL GL+REDEDDDQKKQPSSSLGS QRRLFNDYTQ+IFNLENN  LVPGHAFKN ISF
Subjt:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN--LVPGHAFKNKISF

Query:  LEVQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS
        LEVQESVLL HSSSQIQTQFYAAAGIK  V   S
Subjt:  LEVQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS

XP_008459388.1 PREDICTED: putative transcription factor bHLH041 isoform X2 [Cucumis melo]3.6e-5187.8Show/hide
Query:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN--LVPGHAFKNKISF
        MEIVFS NQDARAS LHSIMQS  S+Y+CLWSYLPHPSNCLMNL GL+REDEDDDQKKQPSSSLGS QRRLFNDYTQ+IFNLENN  LVPGHAFKN ISF
Subjt:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN--LVPGHAFKNKISF

Query:  LEVQESVLLNHSSSQIQTQFYAA
        LEVQESVLL HSSSQIQTQFYA+
Subjt:  LEVQESVLLNHSSSQIQTQFYAA

XP_038890718.1 putative transcription factor bHLH041 isoform X1 [Benincasa hispida]1.5e-4980.3Show/hide
Query:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLE
        MEIVFSL Q ARA+FL SIMQSFHSTYI LWSYLPHPSNCL+NLDG Y   EDDD+KKQPSSSLGS++RRLFN+YTQ+IFNLEN+LVPG+AFKN ISFLE
Subjt:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLE

Query:  VQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS
        VQESVL  HSSSQIQ QFYAAAGIK  V   S
Subjt:  VQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS

XP_038890720.1 putative transcription factor bHLH041 isoform X3 [Benincasa hispida]1.5e-4980.3Show/hide
Query:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLE
        MEIVFSL Q ARA+FL SIMQSFHSTYI LWSYLPHPSNCL+NLDG Y   EDDD+KKQPSSSLGS++RRLFN+YTQ+IFNLEN+LVPG+AFKN ISFLE
Subjt:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLE

Query:  VQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS
        VQESVL  HSSSQIQ QFYAAAGIK  V   S
Subjt:  VQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS

XP_038890721.1 putative transcription factor bHLH041 isoform X4 [Benincasa hispida]1.5e-4980.3Show/hide
Query:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLE
        MEIVFSL Q ARA+FL SIMQSFHSTYI LWSYLPHPSNCL+NLDG Y   EDDD+KKQPSSSLGS++RRLFN+YTQ+IFNLEN+LVPG+AFKN ISFLE
Subjt:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLE

Query:  VQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS
        VQESVL  HSSSQIQ QFYAAAGIK  V   S
Subjt:  VQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS

TrEMBL top hitse value%identityAlignment
A0A1S3C9K1 putative transcription factor bHLH041 isoform X21.8e-5187.8Show/hide
Query:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN--LVPGHAFKNKISF
        MEIVFS NQDARAS LHSIMQS  S+Y+CLWSYLPHPSNCLMNL GL+REDEDDDQKKQPSSSLGS QRRLFNDYTQ+IFNLENN  LVPGHAFKN ISF
Subjt:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN--LVPGHAFKNKISF

Query:  LEVQESVLLNHSSSQIQTQFYAA
        LEVQESVLL HSSSQIQTQFYA+
Subjt:  LEVQESVLLNHSSSQIQTQFYAA

A0A1S3CAK0 putative transcription factor bHLH041 isoform X12.9e-5485.82Show/hide
Query:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN--LVPGHAFKNKISF
        MEIVFS NQDARAS LHSIMQS  S+Y+CLWSYLPHPSNCLMNL GL+REDEDDDQKKQPSSSLGS QRRLFNDYTQ+IFNLENN  LVPGHAFKN ISF
Subjt:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN--LVPGHAFKNKISF

Query:  LEVQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS
        LEVQESVLL HSSSQIQTQFYAAAGIK  V   S
Subjt:  LEVQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS

A0A6J1DKX4 putative transcription factor bHLH0415.7e-4265.15Show/hide
Query:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLE
        +++VFSL++ +RA+FL  +M SFH  YIC+WS+ P  SNCL+NLD LYRED+DDD K+Q SSSLGS+ RRLFNDYTQ++FN++NNLVPGHAF N ISFLE
Subjt:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLE

Query:  VQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS
        ++ES+L  H+S QIQ QFYAAAGIK +V   S
Subjt:  VQESVLLNHSSSQIQTQFYAAAGIKRNVAYNS

A0A6J1FCH4 uncharacterized protein LOC1114441431.5e-3966.14Show/hide
Query:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN--LVPGHAFKNKISF
        M+ VFSL++  RA+FL +IMQSFH TYICLWSYLPHPS+CL+NLD L+RED+      QPSSSLGS++RRLF++Y Q++FN+ENN  LVPGHAF N I F
Subjt:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN--LVPGHAFKNKISF

Query:  LEVQESVLLNHSSSQIQTQFYAAAGIK
        LE+ +S+L  HSSSQIQ+ FYAAAGI+
Subjt:  LEVQESVLLNHSSSQIQTQFYAAAGIK

A0A6J1HKA4 uncharacterized protein LOC1114653355.0e-3864.12Show/hide
Query:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN------LVPGHAFKN
        M+ VFSL++  RA+FL +IMQSFH TYICLWSYLPHPS+CL+NLD L+RED+      QPSSSLGS++RRLF++Y  +IF +ENN      LVPGHAF N
Subjt:  MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENN------LVPGHAFKN

Query:  KISFLEVQESVLLNHSSSQIQTQFYAAAGIK
         I FLE+ +S+L  HSSSQIQ+ FYAAAGIK
Subjt:  KISFLEVQESVLLNHSSSQIQTQFYAAAGIK

SwissProt top hitse value%identityAlignment
Q9LTS4 Putative transcription factor bHLH0412.0e-0437.33Show/hide
Query:  LMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLEV--QESVLLNHSSSQ
        L+++DG Y E  ++      SSS GS  R LF++Y Q +  L+N  VP  AF N + ++E+  QES  L  + +Q
Subjt:  LMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLEV--QESVLLNHSSSQ

Arabidopsis top hitse value%identityAlignment
AT5G56960.1 basic helix-loop-helix (bHLH) DNA-binding family protein1.4e-0537.33Show/hide
Query:  LMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLEV--QESVLLNHSSSQ
        L+++DG Y E  ++      SSS GS  R LF++Y Q +  L+N  VP  AF N + ++E+  QES  L  + +Q
Subjt:  LMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLEV--QESVLLNHSSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTGTATTTTCCCTCAATCAGGATGCTCGAGCTTCCTTCTTGCATTCCATTATGCAATCTTTTCATTCCACTTACATTTGCCTTTGGTCTTATTTACCCCATCC
TTCCAATTGTTTAATGAATCTTGATGGGTTGTATCGGGAGGATGAAGATGATGATCAGAAGAAACAACCCAGCAGTTCTTTAGGAAGTTATCAACGAAGGCTGTTCAATG
ACTATACACAAATCATATTTAATCTTGAAAATAATCTTGTCCCTGGTCATGCTTTCAAGAACAAAATTTCATTTTTAGAGGTTCAGGAATCTGTGCTTCTAAACCACTCT
TCCTCTCAAATCCAAACCCAATTTTATGCTGCAGCTGGGATTAAGAGAAATGTGGCCTACAACTCTCTGATCTTTTTGGTTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTGTATTTTCCCTCAATCAGGATGCTCGAGCTTCCTTCTTGCATTCCATTATGCAATCTTTTCATTCCACTTACATTTGCCTTTGGTCTTATTTACCCCATCC
TTCCAATTGTTTAATGAATCTTGATGGGTTGTATCGGGAGGATGAAGATGATGATCAGAAGAAACAACCCAGCAGTTCTTTAGGAAGTTATCAACGAAGGCTGTTCAATG
ACTATACACAAATCATATTTAATCTTGAAAATAATCTTGTCCCTGGTCATGCTTTCAAGAACAAAATTTCATTTTTAGAGGTTCAGGAATCTGTGCTTCTAAACCACTCT
TCCTCTCAAATCCAAACCCAATTTTATGCTGCAGCTGGGATTAAGAGAAATGTGGCCTACAACTCTCTGATCTTTTTGGTTGATTAA
Protein sequenceShow/hide protein sequence
MEIVFSLNQDARASFLHSIMQSFHSTYICLWSYLPHPSNCLMNLDGLYREDEDDDQKKQPSSSLGSYQRRLFNDYTQIIFNLENNLVPGHAFKNKISFLEVQESVLLNHS
SSQIQTQFYAAAGIKRNVAYNSLIFLVD