; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004403 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004403
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr06:26116034..26116971
RNA-Seq ExpressionPI0004403
SyntenyPI0004403
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.2e-8964.89Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF
        MFDLLQP QI+WEPYK V+DSLP+F                                     VP DCNT+PLLHNIDLRT DWSDR+AHLVMRW NRRRF
Subjt:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF

Query:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV
         ATG    QFD+DVT EYI+WY+NI +LYIT+P A + HLRSNNIRLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV
Subjt:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV

Query:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ
        +QH +EV P+ QTQS    VSP+MMM  FG  YYD  +GQSSDFG GYYNSKAG SS++FGQ
Subjt:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.3e-9065.65Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF
        MFDLLQP QI+WEPYK V+DSLP+F                                     VP DCNT+PLLHNIDLRT DWSDR+AHLVMRW NRRRF
Subjt:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF

Query:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV
         ATG    QFD+DVT EYINWY+NI +LYIT+P AV+ HLRSNNIRLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV
Subjt:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV

Query:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ
        +QH +EV P+ QTQS    VSP+MMM  FG  YYD E+GQSSDFG GYYNS+AG SS++FGQ
Subjt:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.2e-8964.89Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF
        MFDLLQP QI+WEPYK V+DSLP+F                                     VP DCNT+PLLHNIDLRT DWSDR+AHLVMRW NRRRF
Subjt:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF

Query:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV
         ATG    QFD+DVT EYI+WY+NI +LYIT+P A + HLRSNNIRLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV
Subjt:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV

Query:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ
        +QH +EV P+ QTQS    VSP+MMM  FG  YYD  +GQSSDFG GYYNSKAG SS++FGQ
Subjt:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.3e-7766.67Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLPNFYVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRFIATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAV
        MFDLLQP Q        +  +     VP DCNT+PLLHNIDLRT DWSDR+AHLVMRW NRRRF ATG    QFD+DVT EYI+WY+NI +LYIT+P A 
Subjt:  MFDLLQPDQIIWEPYKAVMDSLPNFYVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRFIATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAV

Query:  VGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVSPVRQTQSGTGN--VSPMMMMSAFGMRYY
        + HLRSNNIRLR+VADD QQVL+ICN+NE+YMENIHYMYDVPIV APVQ+RR  VQEPD+LEEV+QH +EV P+ QTQ+ + +  V P+MMM  FG  YY
Subjt:  VGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVSPVRQTQSGTGN--VSPMMMMSAFGMRYY

Query:  DLELGQSSDFGTGYYNSKAGPSSSNFGQ
        D ++GQSSDF  GYYNS+AG SS+NFGQ
Subjt:  DLELGQSSDFGTGYYNSKAGPSSSNFGQ

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-7965.55Show/hide
Query:  MFDLLQPDQII----------WEPYKAVMDSLPNFYVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRFIATGSSFGQFDVDVTPEYINWYRNII
        MFDLLQP Q I          W     V+       VP DCNT+PLLHNIDLRT DW DR+AHLVMRW NRRRF ATG    QFD+DVT EYI+WY+NI 
Subjt:  MFDLLQPDQII----------WEPYKAVMDSLPNFYVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRFIATGSSFGQFDVDVTPEYINWYRNII

Query:  RLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVSPVRQTQSGTGN--VSPMM
        +LYIT+P A + HLRSNN RLR++ADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQE D+LEEV+QH +EV P+ QTQ+ + +  VSP+M
Subjt:  RLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVSPVRQTQSGTGN--VSPMM

Query:  MMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ
        MM  FGM YYD  +GQSSDFG GYYNS+AG SS++FGQ
Subjt:  MMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein2.0e-8964.89Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF
        MFDLLQP QI+WEPYK V+DSLP+F                                     VP DCNT+PLLHNIDLRT DWSDR+AHLVMRW NRRRF
Subjt:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF

Query:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV
         ATG    QFD+DVT EYI+WY+NI +LYIT+P A + HLRSNNIRLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV
Subjt:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV

Query:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ
        +QH +EV P+ QTQS    VSP+MMM  FG  YYD  +GQSSDFG GYYNSKAG SS++FGQ
Subjt:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ

A0A5A7U558 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.1e-7865.11Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLPNFYVPVDCNTKPLLHNIDLRTVDWS---------DRIAHLVMRWLNRRRFIATGSSFGQFDVDVTPEYINWYRNIIR
        MFDLLQP QIIW+ YK V+DSLP+F        + +   I     +W          D++AHLVMRWLNRRRF ATG    QFD+DVT EYI+WY+NI R
Subjt:  MFDLLQPDQIIWEPYKAVMDSLPNFYVPVDCNTKPLLHNIDLRTVDWS---------DRIAHLVMRWLNRRRFIATGSSFGQFDVDVTPEYINWYRNIIR

Query:  LYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVSPVRQTQSGTGNVSPMMMMS
        LYIT+P AVVGHLRSNN RLR+VA++PQQ+L+ICN+NE+YMENIHYMYDVPI  APVQRR A VQ+PD+LEEV+QHV+E+  + QTQS    VSP+MMMS
Subjt:  LYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVSPVRQTQSGTGNVSPMMMMS

Query:  AFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ
        AFG  YYDL +GQSSDFGTGYYNS+A PSSSNFGQ
Subjt:  AFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.3e-9165.65Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF
        MFDLLQP QI+WEPYK V+DSLP+F                                     VP DCNT+PLLHNIDLRT DWSDR+AHLVMRW NRRRF
Subjt:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF

Query:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV
         ATG    QFD+DVT EYINWY+NI +LYIT+P AV+ HLRSNNIRLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV
Subjt:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV

Query:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ
        +QH +EV P+ QTQS    VSP+MMM  FG  YYD E+GQSSDFG GYYNS+AG SS++FGQ
Subjt:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein2.0e-8964.89Show/hide
Query:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF
        MFDLLQP QI+WEPYK V+DSLP+F                                     VP DCNT+PLLHNIDLRT DWSDR+AHLVMRW NRRRF
Subjt:  MFDLLQPDQIIWEPYKAVMDSLPNF------------------------------------YVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRF

Query:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV
         ATG    QFD+DVT EYI+WY+NI +LYIT+P A + HLRSNNIRLR+VADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEPD+LEEV
Subjt:  IATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEV

Query:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ
        +QH +EV P+ QTQS    VSP+MMM  FG  YYD  +GQSSDFG GYYNSKAG SS++FGQ
Subjt:  EQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.6e-8065.55Show/hide
Query:  MFDLLQPDQII----------WEPYKAVMDSLPNFYVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRFIATGSSFGQFDVDVTPEYINWYRNII
        MFDLLQP Q I          W     V+       VP DCNT+PLLHNIDLRT DW DR+AHLVMRW NRRRF ATG    QFD+DVT EYI+WY+NI 
Subjt:  MFDLLQPDQII----------WEPYKAVMDSLPNFYVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRFIATGSSFGQFDVDVTPEYINWYRNII

Query:  RLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVSPVRQTQSGTGN--VSPMM
        +LYIT+P A + HLRSNN RLR++ADDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQE D+LEEV+QH +EV P+ QTQ+ + +  VSP+M
Subjt:  RLYITRPRAVVGHLRSNNIRLRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVSPVRQTQSGTGN--VSPMM

Query:  MMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ
        MM  FGM YYD  +GQSSDFG GYYNS+AG SS++FGQ
Subjt:  MMSAFGMRYYDLELGQSSDFGTGYYNSKAGPSSSNFGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGATCTTCTTCAACCTGATCAGATTATCTGGGAGCCGTACAAAGCTGTCATGGATAGTTTGCCGAATTTCTATGTTCCAGTTGACTGTAATACTAAACCACTCTT
GCACAACATTGATCTGAGAACGGTTGATTGGTCCGATAGAATTGCTCATTTGGTGATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATCTTCGTTTGGGCAAT
TTGATGTTGATGTAACTCCAGAATACATTAATTGGTACAGAAATATTATCAGGCTCTATATCACTCGACCGAGAGCTGTTGTAGGTCATCTGAGGTCAAACAATATTAGA
CTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACGAGCGATACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACC
AGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACACGTGCAAGAAGTGTCTCCTGTGAGACAAACACAAAGCGGGACTGGTAACG
TTAGTCCAATGATGATGATGTCGGCATTTGGAATGAGATATTATGATTTAGAACTCGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAAAGGCAGGTCCATCA
TCGTCAAACTTTGGACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGATCTTCTTCAACCTGATCAGATTATCTGGGAGCCGTACAAAGCTGTCATGGATAGTTTGCCGAATTTCTATGTTCCAGTTGACTGTAATACTAAACCACTCTT
GCACAACATTGATCTGAGAACGGTTGATTGGTCCGATAGAATTGCTCATTTGGTGATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATCTTCGTTTGGGCAAT
TTGATGTTGATGTAACTCCAGAATACATTAATTGGTACAGAAATATTATCAGGCTCTATATCACTCGACCGAGAGCTGTTGTAGGTCATCTGAGGTCAAACAATATTAGA
CTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACGAGCGATACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACC
AGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACACGTGCAAGAAGTGTCTCCTGTGAGACAAACACAAAGCGGGACTGGTAACG
TTAGTCCAATGATGATGATGTCGGCATTTGGAATGAGATATTATGATTTAGAACTCGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAAAGGCAGGTCCATCA
TCGTCAAACTTTGGACAATGA
Protein sequenceShow/hide protein sequence
MFDLLQPDQIIWEPYKAVMDSLPNFYVPVDCNTKPLLHNIDLRTVDWSDRIAHLVMRWLNRRRFIATGSSFGQFDVDVTPEYINWYRNIIRLYITRPRAVVGHLRSNNIR
LRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVSPVRQTQSGTGNVSPMMMMSAFGMRYYDLELGQSSDFGTGYYNSKAGPS
SSNFGQ