; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004413 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004413
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCiliary neurotrophic factor
Genome locationchr11:1848955..1850755
RNA-Seq ExpressionPI0004413
SyntenyPI0004413
Gene Ontology termsGO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025378.1 hypothetical protein SDJN02_11873 [Cucurbita argyrosperma subsp. argyrosperma]7.0e-5870.9Show/hide
Query:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLK
        ME+EQRLELI LAI RLL++NKNK+SSDR+ +   DENG+ +LL DLLSQIESLKEGTESEE  SALD LK+K ++S  ++  DDE SREDIVKELKK+K
Subjt:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLK

Query:  RQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ
        RQN+LT CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  KRPKTIV+N+     KQEHDE S+LP L+IPELP +GLQ
Subjt:  RQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ

XP_004140639.1 uncharacterized protein LOC101222559 [Cucumis sativus]1.3e-8090.96Show/hide
Query:  EEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR
        EEEQRLELIS AIRRLL DNKNKKSSDR+SV   DENGNPSLLRDLLSQIESLKEGTESEE  SALDTLKTKVESSIKEEIVDDECSRED+VKELKKLKR
Subjt:  EEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR

Query:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ
        QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMF+RPKTIVDNTDK  SKQ+HDEVS+LPPLKI +LP VGLQ
Subjt:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ

XP_008459843.1 PREDICTED: uncharacterized protein LOC103498843 [Cucumis melo]6.3e-8391.53Show/hide
Query:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLK
        MEEEQRLELIS AI+RLLEDNKNKKSSDR+SV   DENGNPSLLRDLLSQIESLKEGTES+EFTSALDTLKTKVES IKEEIVDDECSREDIVKELKKLK
Subjt:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLK

Query:  RQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ
        RQNLLTHCLLSVMIVLT+VWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKN S+Q++DEVS+LPPLKIPELP +GLQ
Subjt:  RQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ

XP_022155422.1 uncharacterized protein LOC111022569 [Momordica charantia]3.4e-6073.22Show/hide
Query:  MEEEQRLELISLAIRRLL-EDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDEC-SREDIVKELKK
        MEEEQRLELI+LAIRRL+ E+N NKKSSDR+SV   DE  + +LLR+LLSQIESLKE  ESEE  SA+DT KTK ++S++EEIVDDEC SRE+IV+ELKK
Subjt:  MEEEQRLELISLAIRRLL-EDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDEC-SREDIVKELKK

Query:  LKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIP
        +KRQNL+THCLLSVMIV+TVVWQLSEVSIILN+KDKI+HPFRSLG+F+SG+ KRPKTIV++T+KN SKQ+HDE +VLP +++P
Subjt:  LKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIP

XP_038874574.1 uncharacterized protein LOC120067172 [Benincasa hispida]4.4e-7686.32Show/hide
Query:  EEEQRLELISLAIRRLLED--NKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKL
        EEEQRLELISLAIRRLLE+  NKNKKSSDR+S+   DEN N +LLRDLLSQIESLKEGTESEEF S LDTLKTKVESS+KEEIVDDECSREDIVKELKKL
Subjt:  EEEQRLELISLAIRRLLED--NKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKL

Query:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ
        KRQNLLTHCLLSVMI++TVVWQLSEVSIILNVKDKISHPF+SLGN ISG+ KRPKTIVDNT+KN SKQ+HDE SVLPPLKIPELP V LQ
Subjt:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ

TrEMBL top hitse value%identityAlignment
A0A0A0K9P4 Uncharacterized protein6.4e-8190.96Show/hide
Query:  EEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR
        EEEQRLELIS AIRRLL DNKNKKSSDR+SV   DENGNPSLLRDLLSQIESLKEGTESEE  SALDTLKTKVESSIKEEIVDDECSRED+VKELKKLKR
Subjt:  EEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR

Query:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ
        QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMF+RPKTIVDNTDK  SKQ+HDEVS+LPPLKI +LP VGLQ
Subjt:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ

A0A1S3CAM6 uncharacterized protein LOC1034988433.1e-8391.53Show/hide
Query:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLK
        MEEEQRLELIS AI+RLLEDNKNKKSSDR+SV   DENGNPSLLRDLLSQIESLKEGTES+EFTSALDTLKTKVES IKEEIVDDECSREDIVKELKKLK
Subjt:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLK

Query:  RQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ
        RQNLLTHCLLSVMIVLT+VWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKN S+Q++DEVS+LPPLKIPELP +GLQ
Subjt:  RQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ

A0A5A7T973 Uncharacterized protein3.1e-8391.53Show/hide
Query:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLK
        MEEEQRLELIS AI+RLLEDNKNKKSSDR+SV   DENGNPSLLRDLLSQIESLKEGTES+EFTSALDTLKTKVES IKEEIVDDECSREDIVKELKKLK
Subjt:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLK

Query:  RQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ
        RQNLLTHCLLSVMIVLT+VWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKN S+Q++DEVS+LPPLKIPELP +GLQ
Subjt:  RQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ

A0A6J1DPA5 uncharacterized protein LOC1110225691.6e-6073.22Show/hide
Query:  MEEEQRLELISLAIRRLL-EDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDEC-SREDIVKELKK
        MEEEQRLELI+LAIRRL+ E+N NKKSSDR+SV   DE  + +LLR+LLSQIESLKE  ESEE  SA+DT KTK ++S++EEIVDDEC SRE+IV+ELKK
Subjt:  MEEEQRLELISLAIRRLL-EDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDEC-SREDIVKELKK

Query:  LKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIP
        +KRQNL+THCLLSVMIV+TVVWQLSEVSIILN+KDKI+HPFRSLG+F+SG+ KRPKTIV++T+KN SKQ+HDE +VLP +++P
Subjt:  LKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIP

A0A6J1KTZ8 uncharacterized protein LOC1114976202.2e-5766.5Show/hide
Query:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESL------------KEGTESEEFTSALDTLKTKVESSIKEEIVDD---
        ME+EQRLELI LAI RLL++NKNK+SSDR+ +   DENG+ +LL DLLSQIESL            KEGTESEE  SALD LK K ++S+KEEI DD   
Subjt:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSV---DENGNPSLLRDLLSQIESL------------KEGTESEEFTSALDTLKTKVESSIKEEIVDD---

Query:  --ECSREDIVKELKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPEL
          E S+EDIVKELKK+KRQN+LT CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  KRPKTI++N+     KQEHDE S+LPPL+IPEL
Subjt:  --ECSREDIVKELKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPEL

Query:  PLVGLQ
        P VGL+
Subjt:  PLVGLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27300.1 unknown protein4.3e-2136.79Show/hide
Query:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSVDENGNPSLLRDLLSQIES--------LKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKE
        ME  + +E +S AI +LL + + +++S    +++  +   L  L+SQ+ES        +  G E E+   + D+  +K +S  + ++   E S E+I K+
Subjt:  MEEEQRLELISLAIRRLLEDNKNKKSSDRNSVDENGNPSLLRDLLSQIES--------LKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKE

Query:  LKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFK---RP-KTIVDNTDKNLSKQEHDEVS-VLPPLKIPEL
        +KK+K+QN +TH LLS  I+LT+VWQLSE S+I  +KD+ISHP RS+G  ++GMFK   RP K  +  T  +  +  H   S   P L++PEL
Subjt:  LKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFK---RP-KTIVDNTDKNLSKQEHDEVS-VLPPLKIPEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAGCAACGCCTAGAGTTGATTAGCCTCGCCATTAGGAGGCTACTTGAAGATAACAAGAACAAGAAATCCTCTGATCGGAACTCCGTCGATGAAAACGGAAA
CCCTTCTCTCCTCCGCGACTTGCTTTCTCAGATTGAGTCACTGAAAGAAGGAACAGAATCGGAAGAGTTCACTTCTGCATTAGACACTTTGAAAACAAAAGTTGAGAGTT
CTATTAAAGAGGAAATTGTTGATGATGAGTGTAGTAGAGAAGACATTGTCAAAGAGTTGAAGAAGCTGAAGAGGCAAAACCTTTTAACTCATTGTCTTCTCTCAGTGATG
ATTGTATTGACTGTTGTTTGGCAGCTCTCTGAGGTCTCCATTATCTTGAATGTAAAAGATAAAATCAGCCATCCCTTTAGATCTTTGGGTAATTTTATATCAGGAATGTT
CAAACGCCCTAAAACTATTGTTGATAATACAGACAAGAATTTATCTAAACAAGAACATGATGAAGTTTCAGTGCTTCCCCCTCTCAAAATTCCAGAACTTCCTCTTGTGG
GTTTGCAATGA
mRNA sequenceShow/hide mRNA sequence
CAACTTGTGAGTGTGTGTATCTTTAAATGTAACTTTAGCTCTAGGTAAGAAGCTATGCATGTGTGATATTCAATTTTGTGCAACCATGCAAAATGGAAGACTGTAGAAGA
CAGACTACTCACAACACGCCACGTGGATGTTACTGCTACCTGTCACCCTCACAGCTGCGGTCACCCCATGGCGGAACCCGATACTGGAAGAGCGCTATTGAAAATCCATC
ACCTCTTCCATAGAAAATTTCAAGTGAAACAAATCCATGGAAGAAGAGCAACGCCTAGAGTTGATTAGCCTCGCCATTAGGAGGCTACTTGAAGATAACAAGAACAAGAA
ATCCTCTGATCGGAACTCCGTCGATGAAAACGGAAACCCTTCTCTCCTCCGCGACTTGCTTTCTCAGATTGAGTCACTGAAAGAAGGAACAGAATCGGAAGAGTTCACTT
CTGCATTAGACACTTTGAAAACAAAAGTTGAGAGTTCTATTAAAGAGGAAATTGTTGATGATGAGTGTAGTAGAGAAGACATTGTCAAAGAGTTGAAGAAGCTGAAGAGG
CAAAACCTTTTAACTCATTGTCTTCTCTCAGTGATGATTGTATTGACTGTTGTTTGGCAGCTCTCTGAGGTCTCCATTATCTTGAATGTAAAAGATAAAATCAGCCATCC
CTTTAGATCTTTGGGTAATTTTATATCAGGAATGTTCAAACGCCCTAAAACTATTGTTGATAATACAGACAAGAATTTATCTAAACAAGAACATGATGAAGTTTCAGTGC
TTCCCCCTCTCAAAATTCCAGAACTTCCTCTTGTGGGTTTGCAATGATTTTGGATTTTAATGGCTAGAAACATTGCTTTTCCACTTGTTCTTGAACCAACAAAGGGGAGA
TGGGGTACAGAGAGTGGAGTTTCCGAATGGTGATAAGAAGATGGTTTGGCTAGCAATTTTGCGTCCTTTCTTCTGGATTCATATGGTGGAGCGTAATAAGCGTCTCTTCA
AACATTACTCTTTTCTTTTGATAGTTTTATGAATTTGGTTCTATCTACTAGTAGATTGTATATTGTAATTATGGCAAAACTATGCACCTCTTTACGAATTTTGATCTCAA
ATCTTCTTTTTGTAATGTCTTCCCTTATTTCATTTATTTTCTTCTCTAAAAAGGTTTCCAAACGGCAATGATGAACAGGGAGATATTTGGTTGAAGGAATTCCCCAATCC
TGTAATTATTATATTTGCCTGGTTAAAAAACGGAAATTGTTGTAAATGGCAAAACTGCTGAAAATATTTATAAATATAGCAAAATTACAATGGCGTGGACATCTATCATC
ATCTATCAATATTTATGAGTGATGAATGATAGTAGCCTATCAATGTCCATGAACATCTATAAGTGATATTTTGTTATAATGATAGAGACTAATAGACACTATGAACATCT
CTAAGTGATATTAGTAAAGTTTTTTCTCCTTTTTC
Protein sequenceShow/hide protein sequence
MEEEQRLELISLAIRRLLEDNKNKKSSDRNSVDENGNPSLLRDLLSQIESLKEGTESEEFTSALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKRQNLLTHCLLSVM
IVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFKRPKTIVDNTDKNLSKQEHDEVSVLPPLKIPELPLVGLQ