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PI0004433 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004433
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr02:16807474..16808238
RNA-Seq ExpressionPI0004433
SyntenyPI0004433
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025499.1 uncharacterized protein E6C27_scaffold417G001060 [Cucumis melo var. makuwa]1.3e-1431.8Show/hide
Query:  MVNTRWSTYKSKSDLSYVFRAKHVGPFIVHSRVNKHGVRMRG----STVSRVSTRLNPPSPASTSTEPSPPQVLPVNP--DLFPSSVTPDIPVFYGSAIL
        MVNTR  TY  KS    V  A          +   HG+R+RG    ST+ R   +L  PS  S +  P+    L   P   L      PD P+      +
Subjt:  MVNTRWSTYKSKSDLSYVFRAKHVGPFIVHSRVNKHGVRMRG----STVSRVSTRLNPPSPASTSTEPSPPQVLPVNP--DLFPSSVTPDIPVFYGSAIL

Query:  SSVANDCILNILNPISTETFPVDPNVFTQTTDNPVPNSPLSSNSSEDNMPLVDLVQRVKKPAHNLVSKLGSVPT-PQPTNSHAPSIPNPKPKMKNKRVST
        +S      LN++ P+  E                    P++++   D +P+ D    V +  H    +  SVPT P+P+          K +   + ++T
Subjt:  SSVANDCILNILNPISTETFPVDPNVFTQTTDNPVPNSPLSSNSSEDNMPLVDLVQRVKKPAHNLVSKLGSVPT-PQPTNSHAPSIPNPKPKMKNKRVST

Query:  KSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA
        K+  +KVP ++PSVPIDG+SFH EE+V +WKFV+ R I DE  +SD HH C++I++LI +A
Subjt:  KSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA

KAA0065524.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-1551.14Show/hide
Query:  QPTNSHAPSIPNPKPK--MKNKR-VSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA
        QP    +P +  PK K   +N+R ++TK+R +K+P ++PSVPIDG+SFH EE+V +WK+VV R IADE  +SD HHSC++I+ LI +A
Subjt:  QPTNSHAPSIPNPKPK--MKNKR-VSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA

TYK05279.1 uncharacterized protein E5676_scaffold108G00960 [Cucumis melo var. makuwa]1.7e-1444.44Show/hide
Query:  DNMPLVDLVQRVKKPAHNLVSK------LGSVPTPQPTNSHAPSIPNPKPKMKNKRVSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADE
        D++PL  LV++V  P  ++VSK      L  + TP  +    PS    K +   + ++TK   +K+P ++PSVPIDG+SFH EENV +WKFV+ R IADE
Subjt:  DNMPLVDLVQRVKKPAHNLVSK------LGSVPTPQPTNSHAPSIPNPKPKMKNKRVSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADE

Query:  YEVSDDHHSCITIIDLI
          +SD HHSC++I+ LI
Subjt:  YEVSDDHHSCITIIDLI

TYK29294.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-1551.14Show/hide
Query:  QPTNSHAPSIPNPKPK--MKNKR-VSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA
        QP    +P +  PK K   +N+R ++TK+R +K+P ++PSVPIDG+SFH EE+V +WK+VV R IADE  +SD HHSC++I+ LI +A
Subjt:  QPTNSHAPSIPNPKPK--MKNKR-VSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA

XP_008464590.1 PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo]1.0e-1438.64Show/hide
Query:  VPNSPLSSNSSEDNMPLVDLVQRVKKPAHNLVSKLGSVPTPQPTNSHAPSIPNPKPKMKNK------RVSTKSRCRKVPPHVPSVPIDGVSFHNEENVHK
        +P   + + S E  +  VD V+ V    HN    +     P       PS+P  +   + K       ++TK+  +K+P ++PSVPI G+SFH+EENV +
Subjt:  VPNSPLSSNSSEDNMPLVDLVQRVKKPAHNLVSKLGSVPTPQPTNSHAPSIPNPKPKMKNK------RVSTKSRCRKVPPHVPSVPIDGVSFHNEENVHK

Query:  WKFVVHRHIADEYEVSDDHHSCITIIDLINQA
        WKFVV R IADE  +S+ HHSC++II+LI +A
Subjt:  WKFVVHRHIADEYEVSDDHHSCITIIDLINQA

TrEMBL top hitse value%identityAlignment
A0A1S3CND8 uncharacterized protein LOC1035024364.9e-1538.64Show/hide
Query:  VPNSPLSSNSSEDNMPLVDLVQRVKKPAHNLVSKLGSVPTPQPTNSHAPSIPNPKPKMKNK------RVSTKSRCRKVPPHVPSVPIDGVSFHNEENVHK
        +P   + + S E  +  VD V+ V    HN    +     P       PS+P  +   + K       ++TK+  +K+P ++PSVPI G+SFH+EENV +
Subjt:  VPNSPLSSNSSEDNMPLVDLVQRVKKPAHNLVSKLGSVPTPQPTNSHAPSIPNPKPKMKNK------RVSTKSRCRKVPPHVPSVPIDGVSFHNEENVHK

Query:  WKFVVHRHIADEYEVSDDHHSCITIIDLINQA
        WKFVV R IADE  +S+ HHSC++II+LI +A
Subjt:  WKFVVHRHIADEYEVSDDHHSCITIIDLINQA

A0A5A7SJK4 Uncharacterized protein6.4e-1531.8Show/hide
Query:  MVNTRWSTYKSKSDLSYVFRAKHVGPFIVHSRVNKHGVRMRG----STVSRVSTRLNPPSPASTSTEPSPPQVLPVNP--DLFPSSVTPDIPVFYGSAIL
        MVNTR  TY  KS    V  A          +   HG+R+RG    ST+ R   +L  PS  S +  P+    L   P   L      PD P+      +
Subjt:  MVNTRWSTYKSKSDLSYVFRAKHVGPFIVHSRVNKHGVRMRG----STVSRVSTRLNPPSPASTSTEPSPPQVLPVNP--DLFPSSVTPDIPVFYGSAIL

Query:  SSVANDCILNILNPISTETFPVDPNVFTQTTDNPVPNSPLSSNSSEDNMPLVDLVQRVKKPAHNLVSKLGSVPT-PQPTNSHAPSIPNPKPKMKNKRVST
        +S      LN++ P+  E                    P++++   D +P+ D    V +  H    +  SVPT P+P+          K +   + ++T
Subjt:  SSVANDCILNILNPISTETFPVDPNVFTQTTDNPVPNSPLSSNSSEDNMPLVDLVQRVKKPAHNLVSKLGSVPT-PQPTNSHAPSIPNPKPKMKNKRVST

Query:  KSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA
        K+  +KVP ++PSVPIDG+SFH EE+V +WKFV+ R I DE  +SD HH C++I++LI +A
Subjt:  KSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA

A0A5A7SUK2 Flocculation protein FLO11-like8.3e-1552.81Show/hide
Query:  VPTPQPTNSHAPSIPNPKPKMKNKRVSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA
        +P  QP N    S     P    + VSTK+R RKVPP+VPSVPIDGVSFH EE  HKWK+VV R IADE  ++D ++SC  +++LI  A
Subjt:  VPTPQPTNSHAPSIPNPKPKMKNKRVSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA

A0A5A7VE22 Gag/pol protein9.8e-1651.14Show/hide
Query:  QPTNSHAPSIPNPKPK--MKNKR-VSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA
        QP    +P +  PK K   +N+R ++TK+R +K+P ++PSVPIDG+SFH EE+V +WK+VV R IADE  +SD HHSC++I+ LI +A
Subjt:  QPTNSHAPSIPNPKPK--MKNKR-VSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA

A0A5D3E0G7 Gag/pol protein9.8e-1651.14Show/hide
Query:  QPTNSHAPSIPNPKPK--MKNKR-VSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA
        QP    +P +  PK K   +N+R ++TK+R +K+P ++PSVPIDG+SFH EE+V +WK+VV R IADE  +SD HHSC++I+ LI +A
Subjt:  QPTNSHAPSIPNPKPK--MKNKR-VSTKSRCRKVPPHVPSVPIDGVSFHNEENVHKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAATACTCGCTGGAGTACTTACAAATCCAAGTCTGATTTGTCATATGTTTTTAGGGCCAAGCATGTTGGTCCCTTTATTGTCCACTCCAGGGTTAACAAGCATGG
TGTTCGCATGCGTGGCTCAACTGTTTCGAGGGTTTCTACTCGTTTGAACCCTCCTTCCCCTGCATCTACTTCAACTGAACCCTCTCCTCCGCAAGTGCTTCCGGTAAACC
CTGATCTCTTTCCTTCGTCTGTTACTCCTGATATTCCTGTTTTTTATGGGTCTGCTATTTTATCTTCTGTTGCTAATGATTGTATTTTGAATATTTTGAATCCTATATCT
ACTGAAACTTTTCCTGTTGATCCTAATGTTTTCACCCAAACTACTGACAATCCTGTCCCAAATTCTCCATTGTCTTCAAATTCTTCTGAGGATAATATGCCTCTTGTTGA
TCTTGTTCAGCGTGTCAAAAAGCCTGCCCACAACTTAGTTTCTAAACTTGGTTCTGTTCCAACTCCTCAACCAACTAATTCTCATGCTCCGTCCATTCCAAATCCTAAAC
CAAAAATGAAAAACAAACGCGTCTCCACCAAGTCTAGATGTCGAAAAGTCCCTCCTCATGTGCCATCTGTTCCGATTGATGGTGTATCCTTTCATAATGAGGAAAACGTA
CACAAATGGAAATTTGTGGTCCATCGTCATATTGCTGATGAGTACGAAGTGTCCGATGATCACCATTCTTGTATTACTATCATAGATCTCATTAACCAAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAATACTCGCTGGAGTACTTACAAATCCAAGTCTGATTTGTCATATGTTTTTAGGGCCAAGCATGTTGGTCCCTTTATTGTCCACTCCAGGGTTAACAAGCATGG
TGTTCGCATGCGTGGCTCAACTGTTTCGAGGGTTTCTACTCGTTTGAACCCTCCTTCCCCTGCATCTACTTCAACTGAACCCTCTCCTCCGCAAGTGCTTCCGGTAAACC
CTGATCTCTTTCCTTCGTCTGTTACTCCTGATATTCCTGTTTTTTATGGGTCTGCTATTTTATCTTCTGTTGCTAATGATTGTATTTTGAATATTTTGAATCCTATATCT
ACTGAAACTTTTCCTGTTGATCCTAATGTTTTCACCCAAACTACTGACAATCCTGTCCCAAATTCTCCATTGTCTTCAAATTCTTCTGAGGATAATATGCCTCTTGTTGA
TCTTGTTCAGCGTGTCAAAAAGCCTGCCCACAACTTAGTTTCTAAACTTGGTTCTGTTCCAACTCCTCAACCAACTAATTCTCATGCTCCGTCCATTCCAAATCCTAAAC
CAAAAATGAAAAACAAACGCGTCTCCACCAAGTCTAGATGTCGAAAAGTCCCTCCTCATGTGCCATCTGTTCCGATTGATGGTGTATCCTTTCATAATGAGGAAAACGTA
CACAAATGGAAATTTGTGGTCCATCGTCATATTGCTGATGAGTACGAAGTGTCCGATGATCACCATTCTTGTATTACTATCATAGATCTCATTAACCAAGCCTAG
Protein sequenceShow/hide protein sequence
MVNTRWSTYKSKSDLSYVFRAKHVGPFIVHSRVNKHGVRMRGSTVSRVSTRLNPPSPASTSTEPSPPQVLPVNPDLFPSSVTPDIPVFYGSAILSSVANDCILNILNPIS
TETFPVDPNVFTQTTDNPVPNSPLSSNSSEDNMPLVDLVQRVKKPAHNLVSKLGSVPTPQPTNSHAPSIPNPKPKMKNKRVSTKSRCRKVPPHVPSVPIDGVSFHNEENV
HKWKFVVHRHIADEYEVSDDHHSCITIIDLINQA