; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004443 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004443
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr01:11895399..11896057
RNA-Seq ExpressionPI0004443
SyntenyPI0004443
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025424.1 uncharacterized protein E6C27_scaffold417G00080 [Cucumis melo var. makuwa]2.7e-3538.54Show/hide
Query:  IVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELTEALV--------------------
        IVS++GPFY QL+REL+VN+   FN  ++ EY+KVH+  +CFN++  ++N YLG+ALP +++V+ P+   LA ELT+  V                    
Subjt:  IVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELTEALV--------------------

Query:  -----------------------NLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTISLSYRVFQGSH
                               + ++L+ TG +V+VG+F+FN +LRHV+TFG+ IPICF  +L   +L Q  ++LT  N  G AP+ I L+ R+FQG+H
Subjt:  -----------------------NLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTISLSYRVFQGSH

Query:  VPNIA
        +PN+A
Subjt:  VPNIA

TYJ98311.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]2.1e-3538.14Show/hide
Query:  ELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT--------------
        ELI    L + VS+VGPFY +LIREL+VN+   FN P++ EY+KVH+  +CFN++  ++N YLG+ LP +++V+ P+P  LA ELT              
Subjt:  ELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT--------------

Query:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS
                                      +L + ++L+ TG +V+VG+F+FN +LRHV+TF + I ICF  +L   +L Q  ++LT  +  G AP+ IS
Subjt:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS

Query:  LSYRVFQGSHVPNIA
        LS R+FQG+H P++A
Subjt:  LSYRVFQGSHVPNIA

TYK03159.1 uncharacterized protein E5676_scaffold11G00350 [Cucumis melo var. makuwa]7.9e-3539.91Show/hide
Query:  MELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT-------------
        M LI + GL+K +S VGPFY QLIRE +VN+L  FN  +SL+Y+ VH+ D  F ++ T+IN +LG  +  NFS + PS + LAS L+             
Subjt:  MELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT-------------

Query:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS
                                      AL   ++ I    +VD G F++N++LRHV +FG+K+PI      Y ++L  + +VLT  NAPGP PKT+S
Subjt:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS

Query:  LSYRVFQGSHVPNIAHSM
        LSYR+FQGSHVP+I H +
Subjt:  LSYRVFQGSHVPNIAHSM

XP_008441663.1 PREDICTED: uncharacterized protein LOC103485747 [Cucumis melo]1.0e-3439.91Show/hide
Query:  MELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT-------------
        M LI + GL+K +S VGPFY QLIRE +VN+L  FN  +SL+Y+ VH+ D  F ++ T+IN +LG  +  NFS + PS + LAS L+             
Subjt:  MELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT-------------

Query:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS
                                      AL   ++ I    +VD G F++N++LRHV +FG+K+PI      Y ++L  + +VLT  NAPGP PKT+S
Subjt:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS

Query:  LSYRVFQGSHVPNIAHSM
        LSYR+FQGSHVP+I H +
Subjt:  LSYRVFQGSHVPNIAHSM

XP_016901851.1 PREDICTED: uncharacterized protein LOC107991438 [Cucumis melo]2.1e-3538.14Show/hide
Query:  ELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT--------------
        ELI    L + VS+VGPFY +LIREL+VN+   FN P++ EY+KVH+  +CFN++  ++N YLG+ LP +++V+ P+P  LA ELT              
Subjt:  ELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT--------------

Query:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS
                                      +L + ++L+ TG +V+VG+F+FN +LRHV+TF + I ICF  +L   +L Q  ++LT  +  G AP+ IS
Subjt:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS

Query:  LSYRVFQGSHVPNIA
        LS R+FQG+H P++A
Subjt:  LSYRVFQGSHVPNIA

TrEMBL top hitse value%identityAlignment
A0A1S4E0U5 uncharacterized protein LOC1079914381.0e-3538.14Show/hide
Query:  ELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT--------------
        ELI    L + VS+VGPFY +LIREL+VN+   FN P++ EY+KVH+  +CFN++  ++N YLG+ LP +++V+ P+P  LA ELT              
Subjt:  ELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT--------------

Query:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS
                                      +L + ++L+ TG +V+VG+F+FN +LRHV+TF + I ICF  +L   +L Q  ++LT  +  G AP+ IS
Subjt:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS

Query:  LSYRVFQGSHVPNIA
        LS R+FQG+H P++A
Subjt:  LSYRVFQGSHVPNIA

A0A5A7SIG0 Uncharacterized protein1.3e-3538.54Show/hide
Query:  IVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELTEALV--------------------
        IVS++GPFY QL+REL+VN+   FN  ++ EY+KVH+  +CFN++  ++N YLG+ALP +++V+ P+   LA ELT+  V                    
Subjt:  IVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELTEALV--------------------

Query:  -----------------------NLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTISLSYRVFQGSH
                               + ++L+ TG +V+VG+F+FN +LRHV+TFG+ IPICF  +L   +L Q  ++LT  N  G AP+ I L+ R+FQG+H
Subjt:  -----------------------NLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTISLSYRVFQGSH

Query:  VPNIA
        +PN+A
Subjt:  VPNIA

A0A5A7UAG4 Uncharacterized protein5.0e-3539.91Show/hide
Query:  MELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT-------------
        M LI + GL+K +S VGPFY QLIRE +VN+L  FN  +SL+Y+ VH+ D  F ++ T+IN +LG  +  NFS + PS + LAS L+             
Subjt:  MELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT-------------

Query:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS
                                      AL   ++ I    +VD G F++N++LRHV +FG+K+PI      Y ++L  + +VLT  NAPGP PKT+S
Subjt:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS

Query:  LSYRVFQGSHVPNIAHSM
        LSYR+FQGSHVP+I H +
Subjt:  LSYRVFQGSHVPNIAHSM

A0A5D3BI15 Flocculation protein FLO11-like1.0e-3538.14Show/hide
Query:  ELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT--------------
        ELI    L + VS+VGPFY +LIREL+VN+   FN P++ EY+KVH+  +CFN++  ++N YLG+ LP +++V+ P+P  LA ELT              
Subjt:  ELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT--------------

Query:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS
                                      +L + ++L+ TG +V+VG+F+FN +LRHV+TF + I ICF  +L   +L Q  ++LT  +  G AP+ IS
Subjt:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS

Query:  LSYRVFQGSHVPNIA
        LS R+FQG+H P++A
Subjt:  LSYRVFQGSHVPNIA

A0A5D3BYK9 Uncharacterized protein3.8e-3539.91Show/hide
Query:  MELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT-------------
        M LI + GL+K +S VGPFY QLIRE +VN+L  FN  +SL+Y+ VH+ D  F ++ T+IN +LG  +  NFS + PS + LAS L+             
Subjt:  MELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELT-------------

Query:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS
                                      AL   ++ I    +VD G F++N++LRHV +FG+K+PI      Y ++L  + +VLT  NAPGP PKT+S
Subjt:  -----------------------------EALVNLIFLISTGSQVDVGQFVFNEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTIS

Query:  LSYRVFQGSHVPNIAHSM
        LSYR+FQGSHVP+I H +
Subjt:  LSYRVFQGSHVPNIAHSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTATCCACCGTGTTGGGCTTACTAAGATCGTGTCTAAGGTTGGGCCTTTCTACCATCAGCTGATTCGTGAGCTTGTTGTTAATATTCTAGTTAAGTTTAATGG
TCCCAATAGCCTTGAGTACCGTAAGGTTCATGTCCATGACTTATGTTTCAATTTGACTTCTACTATCATCAATGACTATCTTGGCGTTGCTCTGCCGCCTAATTTCTCTG
TGAACCAGCCATCTCCCAATACATTGGCATCTGAGTTGACTGAGGCTCTGGTCAACCTCATTTTTCTCATTAGCACTGGATCCCAAGTTGATGTGGGTCAGTTTGTCTTC
AACGAAATTCTACGCCATGTTGAGACTTTTGGTTTGAAGATTCCCATCTGTTTTTCTTGCCTTCTCTACAGTATTATGCTCACTCAGCATCCGTCTGTGTTAACTGACCA
AAATGCACCTGGCCCTGCTCCGAAGACAATCAGTCTAAGCTATCGAGTGTTTCAGGGATCGCATGTTCCTAATATTGCTCACTCTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTTATCCACCGTGTTGGGCTTACTAAGATCGTGTCTAAGGTTGGGCCTTTCTACCATCAGCTGATTCGTGAGCTTGTTGTTAATATTCTAGTTAAGTTTAATGG
TCCCAATAGCCTTGAGTACCGTAAGGTTCATGTCCATGACTTATGTTTCAATTTGACTTCTACTATCATCAATGACTATCTTGGCGTTGCTCTGCCGCCTAATTTCTCTG
TGAACCAGCCATCTCCCAATACATTGGCATCTGAGTTGACTGAGGCTCTGGTCAACCTCATTTTTCTCATTAGCACTGGATCCCAAGTTGATGTGGGTCAGTTTGTCTTC
AACGAAATTCTACGCCATGTTGAGACTTTTGGTTTGAAGATTCCCATCTGTTTTTCTTGCCTTCTCTACAGTATTATGCTCACTCAGCATCCGTCTGTGTTAACTGACCA
AAATGCACCTGGCCCTGCTCCGAAGACAATCAGTCTAAGCTATCGAGTGTTTCAGGGATCGCATGTTCCTAATATTGCTCACTCTATGTGA
Protein sequenceShow/hide protein sequence
MELIHRVGLTKIVSKVGPFYHQLIRELVVNILVKFNGPNSLEYRKVHVHDLCFNLTSTIINDYLGVALPPNFSVNQPSPNTLASELTEALVNLIFLISTGSQVDVGQFVF
NEILRHVETFGLKIPICFSCLLYSIMLTQHPSVLTDQNAPGPAPKTISLSYRVFQGSHVPNIAHSM