; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004455 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004455
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionADP-ribosylation factor GTPase-activating protein AGD4-like isoform X2
Genome locationchr12:9497709..9502511
RNA-Seq ExpressionPI0004455
SyntenyPI0004455
Gene Ontology termsGO:0050790 - regulation of catalytic activity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005096 - GTPase activator activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454717.1 PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X1 [Cucumis melo]3.3e-2887.95Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL
        QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNL+ASNSL+PSVVSDGIHGSGISSYR+VET PQSIVNGKV   K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL

XP_008454718.1 PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X2 [Cucumis melo]3.3e-2887.95Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL
        QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNL+ASNSL+PSVVSDGIHGSGISSYR+VET PQSIVNGKV   K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL

XP_008454719.1 PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X4 [Cucumis melo]3.3e-2887.95Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL
        QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNL+ASNSL+PSVVSDGIHGSGISSYR+VET PQSIVNGKV   K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL

XP_016901635.1 PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X3 [Cucumis melo]3.3e-2887.95Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL
        QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNL+ASNSL+PSVVSDGIHGSGISSYR+VET PQSIVNGKV   K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL

XP_022150048.1 ADP-ribosylation factor GTPase-activating protein AGD2-like isoform X7 [Momordica charantia]3.3e-2863.2Show/hide
Query:  DSRQRFDKAIHEYD------------------------------------QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDG
        DSRQRFDKA+H YD                                    QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNL+ASNS++PSVVSDG
Subjt:  DSRQRFDKAIHEYD------------------------------------QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDG

Query:  IHGSGISSYRNVETGPQSIVNGKVK
        IHGSGISSYRNVE  P+SI N KVK
Subjt:  IHGSGISSYRNVETGPQSIVNGKVK

TrEMBL top hitse value%identityAlignment
A0A1S3BYT7 ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X41.6e-2887.95Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL
        QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNL+ASNSL+PSVVSDGIHGSGISSYR+VET PQSIVNGKV   K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL

A0A1S3C009 ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X11.6e-2887.95Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL
        QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNL+ASNSL+PSVVSDGIHGSGISSYR+VET PQSIVNGKV   K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL

A0A1S3C0G9 ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X21.6e-2887.95Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL
        QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNL+ASNSL+PSVVSDGIHGSGISSYR+VET PQSIVNGKV   K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL

A0A1S4E0Y6 ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X31.6e-2887.95Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL
        QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNL+ASNSL+PSVVSDGIHGSGISSYR+VET PQSIVNGKV   K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV---KNGFFL

A0A6J1D8E8 ADP-ribosylation factor GTPase-activating protein AGD2-like isoform X71.6e-2863.2Show/hide
Query:  DSRQRFDKAIHEYD------------------------------------QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDG
        DSRQRFDKA+H YD                                    QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNL+ASNS++PSVVSDG
Subjt:  DSRQRFDKAIHEYD------------------------------------QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDG

Query:  IHGSGISSYRNVETGPQSIVNGKVK
        IHGSGISSYRNVE  P+SI N KVK
Subjt:  IHGSGISSYRNVETGPQSIVNGKVK

SwissProt top hitse value%identityAlignment
Q5W7F2 ADP-ribosylation factor GTPase-activating protein AGD31.5e-0742.11Show/hide
Query:  DQVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKVK
        +QVLTYAQQS+E +N EQ  L +++QE++ Q   ++   SN  N S   DGI   G SS++ ++   QS   GKV+
Subjt:  DQVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKVK

Q9C6C3 ADP-ribosylation factor GTPase-activating protein AGD21.2e-0950.62Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV-KNGFFL
        QVLTYAQQSKE + IEQD+ A+RIQEFRTQ++LD+ +AS   +PS V  G H       +NVE    S  + +V K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV-KNGFFL

Q9SMX5 ADP-ribosylation factor GTPase-activating protein AGD41.4e-0847.06Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISS---YRNVETGPQSIVNGK--VKNGFFL
        Q+LTYAQQSKE + IEQD+LA+RIQEFRTQ++LD    S  L  +  S G +G+ +     Y+N ET   S+   K  +K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISS---YRNVETGPQSIVNGK--VKNGFFL

Arabidopsis top hitse value%identityAlignment
AT1G10870.1 ARF-GAP domain 49.7e-1047.06Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISS---YRNVETGPQSIVNGK--VKNGFFL
        Q+LTYAQQSKE + IEQD+LA+RIQEFRTQ++LD    S  L  +  S G +G+ +     Y+N ET   S+   K  +K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISS---YRNVETGPQSIVNGK--VKNGFFL

AT1G60860.1 ARF-GAP domain 28.8e-1150.62Show/hide
Query:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV-KNGFFL
        QVLTYAQQSKE + IEQD+ A+RIQEFRTQ++LD+ +AS   +PS V  G H       +NVE    S  + +V K G+ L
Subjt:  QVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKV-KNGFFL

AT5G13300.1 ARF GTPase-activating protein1.1e-0842.11Show/hide
Query:  DQVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKVK
        +QVLTYAQQS+E +N EQ  L +++QE++ Q   ++   SN  N S   DGI   G SS++ ++   QS   GKV+
Subjt:  DQVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKVK

AT5G61980.1 ARF-GAP domain 12.1e-0436.84Show/hide
Query:  DQVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKVK
        +QVL YA QS+E AN E   L +R+QE+  Q Q+D    ++ ++P+   DG+  +  +S + +E   QS   GKV+
Subjt:  DQVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVETGPQSIVNGKVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGACATTTTAGATGTAGGGATAGATCTGAACGGAAGCAAAGGGAGGTTATTAGGTTTTCCTAAATCATCGATTGACCCAAAAGTTTATGTTGAGGACTCTCGTCA
ACGCTTTGATAAAGCTATTCATGAGTATGACCAGGTTCTAACATATGCACAACAATCTAAAGAACTGGCCAACATTGAACAAGATAAACTTGCAAAAAGGATTCAGGAAT
TCAGGACACAGGCACAGCTGGACAATTTGAAAGCTTCCAATAGCCTAAATCCTTCTGTGGTTTCTGATGGCATTCATGGTAGTGGTATTAGCTCCTACAGAAATGTTGAA
ACAGGTCCTCAATCCATTGTCAATGGGAAGGTGAAGAACGGTTTTTTTCTTTTCAGTTTCTTCACAATAACCATCTACTCAACTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTAGACATTTTAGATGTAGGGATAGATCTGAACGGAAGCAAAGGGAGGTTATTAGGTTTTCCTAAATCATCGATTGACCCAAAAGTTTATGTTGAGGACTCTCGTCA
ACGCTTTGATAAAGCTATTCATGAGTATGACCAGGTTCTAACATATGCACAACAATCTAAAGAACTGGCCAACATTGAACAAGATAAACTTGCAAAAAGGATTCAGGAAT
TCAGGACACAGGCACAGCTGGACAATTTGAAAGCTTCCAATAGCCTAAATCCTTCTGTGGTTTCTGATGGCATTCATGGTAGTGGTATTAGCTCCTACAGAAATGTTGAA
ACAGGTCCTCAATCCATTGTCAATGGGAAGGTGAAGAACGGTTTTTTTCTTTTCAGTTTCTTCACAATAACCATCTACTCAACTCCTTAA
Protein sequenceShow/hide protein sequence
MLDILDVGIDLNGSKGRLLGFPKSSIDPKVYVEDSRQRFDKAIHEYDQVLTYAQQSKELANIEQDKLAKRIQEFRTQAQLDNLKASNSLNPSVVSDGIHGSGISSYRNVE
TGPQSIVNGKVKNGFFLFSFFTITIYSTP