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PI0004475 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004475
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBeta-galactosidase
Genome locationchr07:17450698..17454713
RNA-Seq ExpressionPI0004475
SyntenyPI0004475
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045693.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.7e-3560.13Show/hide
Query:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ
        MDLCR  VWDT NDS Q+A+LEEADRVYDFL GL+PKFD VCGRILGQRPL SLMEVC+EV LEEDR NAM VLTTP  DSAA SARSS  D  K     
Subjt:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ

Query:  FPPVSTSSEH-------AYMSES--TGASQLFGPTINQNGPNSPSMLGALTQS
         P     S +       AY+SE+  T  SQ   PT +Q    +P+ LGA+ QS
Subjt:  FPPVSTSSEH-------AYMSES--TGASQLFGPTINQNGPNSPSMLGALTQS

KAA0048797.1 reverse transcriptase [Cucumis melo var. makuwa]5.1e-3657.62Show/hide
Query:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ
        MDLCR+ VW T ND + +A+LEEADR YDFL GL+PKFD VCG ILGQRPL SLMEVCYEV LEEDR NAMS+LTTPA DS AF+ RSS  D  K   + 
Subjt:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ

Query:  FPPVSTSSEHAYMSESTGASQLFGPTINQNGPNSPSML--GALTQSEVQFQ
              +S  AY+SE TG SQ  GPT +QN P +  ++    LT ++V ++
Subjt:  FPPVSTSSEHAYMSESTGASQLFGPTINQNGPNSPSML--GALTQSEVQFQ

KAA0063166.1 Beta-galactosidase [Cucumis melo var. makuwa]5.7e-3554.55Show/hide
Query:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ
        MDLCR+ VWDT NDS Q+A+LEEADRVYDFL GL+PKFD VCGRILGQRPL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSARSSN D  K     
Subjt:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ

Query:  FPPV------------------------------STSSEHAYMSESTGA--SQLFGPTINQNGPNSPSMLGALTQS
         P                                  +SE AY+SE+T A  SQ   PT +Q    +P+ LGA+ QS
Subjt:  FPPV------------------------------STSSEHAYMSESTGA--SQLFGPTINQNGPNSPSMLGALTQS

TYJ99589.1 Beta-galactosidase [Cucumis melo var. makuwa]9.7e-3560.13Show/hide
Query:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ
        MDLCR  VWDT NDS Q+A+LEEADRVYDFL GL+PKFD VCGRILGQRPL SLMEVC+EV LEEDR NAM VLTTP  DSAA SARSS  D  K     
Subjt:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ

Query:  FPPVSTSSEH-------AYMSES--TGASQLFGPTINQNGPNSPSMLGALTQS
         P     S +       AY+SE+  T  SQ   PT +Q    +P+ LGA+ QS
Subjt:  FPPVSTSSEH-------AYMSES--TGASQLFGPTINQNGPNSPSMLGALTQS

TYK31446.1 TRAF-like family protein [Cucumis melo var. makuwa]4.3e-3560.13Show/hide
Query:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ
        M LCR+IVWDT ND  Q+A+LEEADRVYDFL GL+PKFD VCGRILGQRPL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSAR SN D  K     
Subjt:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ

Query:  FPPVSTSSEH-------AYMSESTGA--SQLFGPTINQNGPNSPSMLGALTQS
         P     S +       AY+SE++ A  SQ   PT +Q    +P+ LGA+ QS
Subjt:  FPPVSTSSEH-------AYMSESTGA--SQLFGPTINQNGPNSPSMLGALTQS

TrEMBL top hitse value%identityAlignment
A0A5A7TQ67 Retrovirus-related Pol polyprotein from transposon TNT 1-944.7e-3560.13Show/hide
Query:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ
        MDLCR  VWDT NDS Q+A+LEEADRVYDFL GL+PKFD VCGRILGQRPL SLMEVC+EV LEEDR NAM VLTTP  DSAA SARSS  D  K     
Subjt:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ

Query:  FPPVSTSSEH-------AYMSES--TGASQLFGPTINQNGPNSPSMLGALTQS
         P     S +       AY+SE+  T  SQ   PT +Q    +P+ LGA+ QS
Subjt:  FPPVSTSSEH-------AYMSES--TGASQLFGPTINQNGPNSPSMLGALTQS

A0A5A7V9P8 Beta-galactosidase2.7e-3554.55Show/hide
Query:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ
        MDLCR+ VWDT NDS Q+A+LEEADRVYDFL GL+PKFD VCGRILGQRPL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSARSSN D  K     
Subjt:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ

Query:  FPPV------------------------------STSSEHAYMSESTGA--SQLFGPTINQNGPNSPSMLGALTQS
         P                                  +SE AY+SE+T A  SQ   PT +Q    +P+ LGA+ QS
Subjt:  FPPV------------------------------STSSEHAYMSESTGA--SQLFGPTINQNGPNSPSMLGALTQS

A0A5D3BKV4 Beta-galactosidase4.7e-3560.13Show/hide
Query:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ
        MDLCR  VWDT NDS Q+A+LEEADRVYDFL GL+PKFD VCGRILGQRPL SLMEVC+EV LEEDR NAM VLTTP  DSAA SARSS  D  K     
Subjt:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ

Query:  FPPVSTSSEH-------AYMSES--TGASQLFGPTINQNGPNSPSMLGALTQS
         P     S +       AY+SE+  T  SQ   PT +Q    +P+ LGA+ QS
Subjt:  FPPVSTSSEH-------AYMSES--TGASQLFGPTINQNGPNSPSMLGALTQS

A0A5D3DBU1 Reverse transcriptase2.5e-3657.62Show/hide
Query:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ
        MDLCR+ VW T ND + +A+LEEADR YDFL GL+PKFD VCG ILGQRPL SLMEVCYEV LEEDR NAMS+LTTPA DS AF+ RSS  D  K   + 
Subjt:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ

Query:  FPPVSTSSEHAYMSESTGASQLFGPTINQNGPNSPSML--GALTQSEVQFQ
              +S  AY+SE TG SQ  GPT +QN P +  ++    LT ++V ++
Subjt:  FPPVSTSSEHAYMSESTGASQLFGPTINQNGPNSPSML--GALTQSEVQFQ

A0A5D3E711 TRAF-like family protein2.1e-3560.13Show/hide
Query:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ
        M LCR+IVWDT ND  Q+A+LEEADRVYDFL GL+PKFD VCGRILGQRPL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSAR SN D  K     
Subjt:  MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQ

Query:  FPPVSTSSEH-------AYMSESTGA--SQLFGPTINQNGPNSPSMLGALTQS
         P     S +       AY+SE++ A  SQ   PT +Q    +P+ LGA+ QS
Subjt:  FPPVSTSSEH-------AYMSESTGA--SQLFGPTINQNGPNSPSMLGALTQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGTGTAGAGACATTGTTTGGGATACTTTTAATGATAGTTTACAGTTCGCTAGGCTAGAAGAAGCGGATCGTGTTTATGATTTTCTTACCGGTCTCCATCCTAA
GTTTGATACTGTTTGTGGTCGTATCCTTGGCCAGAGGCCTCTTTCGTCCTTGATGGAGGTCTGCTATGAAGTCCATCTTGAAGAAGATCGCATGAATGCCATGAGTGTCC
TAACTACTCCTGCCACTGACTCTGCCGCCTTTAGTGCTCGTTCCTCCAACCTCGATATGAGAAAAGCAATGATAAACCAGTTTCCACCTGTGAGCACTAGTTCAGAACAT
GCCTACATGAGTGAGTCTACGGGAGCATCTCAACTGTTTGGTCCTACTATTAACCAGAACGGTCCCAATTCACCCTCCATGTTAGGAGCCCTTACTCAGTCAGAAGTTCA
ATTTCAATTGAATCGTGCGTTCAAACCCGAAGATCGTGTGACCAAGTTTATGAGTGACGGTGAACAACCAGAATTCGAGCTTGACCCTAAGATTGAGCGAATCTTTCGAC
GTAACCGACAAAGAATGAGGCAGAGAAACGCACAAAGAATGGAGAATAATAACAATCGAAATGTACCTCCGCCTCAAGCTGCCCAAGAACAAAATGCCGCCTACATGGCG
CATGACTTGGATAGGCCAATTAGGTCATATGCTGCACCCAACCTTTACAACTTCAACCCAGGAATCACTTACCCTGTGTTCCGTGATTTGATATTTTTATGTATCTATCT
CTTGTCGTTATATTTTTATATTAAGCTCTCTAACTCTTATTATATGGTATATGGATGGATGAAAGTTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGTGTAGAGACATTGTTTGGGATACTTTTAATGATAGTTTACAGTTCGCTAGGCTAGAAGAAGCGGATCGTGTTTATGATTTTCTTACCGGTCTCCATCCTAA
GTTTGATACTGTTTGTGGTCGTATCCTTGGCCAGAGGCCTCTTTCGTCCTTGATGGAGGTCTGCTATGAAGTCCATCTTGAAGAAGATCGCATGAATGCCATGAGTGTCC
TAACTACTCCTGCCACTGACTCTGCCGCCTTTAGTGCTCGTTCCTCCAACCTCGATATGAGAAAAGCAATGATAAACCAGTTTCCACCTGTGAGCACTAGTTCAGAACAT
GCCTACATGAGTGAGTCTACGGGAGCATCTCAACTGTTTGGTCCTACTATTAACCAGAACGGTCCCAATTCACCCTCCATGTTAGGAGCCCTTACTCAGTCAGAAGTTCA
ATTTCAATTGAATCGTGCGTTCAAACCCGAAGATCGTGTGACCAAGTTTATGAGTGACGGTGAACAACCAGAATTCGAGCTTGACCCTAAGATTGAGCGAATCTTTCGAC
GTAACCGACAAAGAATGAGGCAGAGAAACGCACAAAGAATGGAGAATAATAACAATCGAAATGTACCTCCGCCTCAAGCTGCCCAAGAACAAAATGCCGCCTACATGGCG
CATGACTTGGATAGGCCAATTAGGTCATATGCTGCACCCAACCTTTACAACTTCAACCCAGGAATCACTTACCCTGTGTTCCGTGATTTGATATTTTTATGTATCTATCT
CTTGTCGTTATATTTTTATATTAAGCTCTCTAACTCTTATTATATGGTATATGGATGGATGAAAGTTGGATGA
Protein sequenceShow/hide protein sequence
MDLCRDIVWDTFNDSLQFARLEEADRVYDFLTGLHPKFDTVCGRILGQRPLSSLMEVCYEVHLEEDRMNAMSVLTTPATDSAAFSARSSNLDMRKAMINQFPPVSTSSEH
AYMSESTGASQLFGPTINQNGPNSPSMLGALTQSEVQFQLNRAFKPEDRVTKFMSDGEQPEFELDPKIERIFRRNRQRMRQRNAQRMENNNNRNVPPPQAAQEQNAAYMA
HDLDRPIRSYAAPNLYNFNPGITYPVFRDLIFLCIYLLSLYFYIKLSNSYYMVYGWMKVG