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PI0004477 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004477
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr04:23294172..23294621
RNA-Seq ExpressionPI0004477
SyntenyPI0004477
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.5e-2955.22Show/hide
Query:  ESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAE
        ESD  SS PHV  E N+EE   +  AQR+   I       +K++ IERLKALGATTF GTTNP DAE+WLTLIEKCF V  C  + KV+LA FLLQ  AE
Subjt:  ESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAE

Query:  DCWKFHAARAGRPSFIIWKEFRKAFWDKFYLCSF
        D W    +R      +IW EF+KAF+DKFY  SF
Subjt:  DCWKFHAARAGRPSFIIWKEFRKAFWDKFYLCSF

KAA0035024.1 hypothetical protein E6C27_scaffold57G00740 [Cucumis melo var. makuwa]8.5e-3067.62Show/hide
Query:  ISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAEDCWK
        +SSNPH    QN EES F  F+QR+  H TP+  AV+KRF IERLKALGATTFEGTTNP + EKWL+LIEK FGVM+C  E  VKLAT LLQGS ED W 
Subjt:  ISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAEDCWK

Query:  FHAAR
        FH AR
Subjt:  FHAAR

KAA0054080.1 hypothetical protein E6C27_scaffold1371G00020 [Cucumis melo var. makuwa]1.0e-2765.31Show/hide
Query:  ANRALESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATF
        ANRA   D++SSNPH T  QN+EES FN FAQRVADH+ P    V+KR  IER+KALGAT FEGT  PT+ +KWL+L EKCF VM+CP E KVKLA F
Subjt:  ANRALESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATF

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]1.8e-2752.24Show/hide
Query:  ESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAE
        ESD  SS P V  E+N+EE   +  AQR+   I       +K++  ERLKALGATTF GTTNPTD E WLTLIEKCF V     + KV+LA FLLQ  AE
Subjt:  ESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAE

Query:  DCWKFHAARAGRPSFIIWKEFRKAFWDKFYLCSF
        D W+   +R      + W EF+KAF+DKFY  SF
Subjt:  DCWKFHAARAGRPSFIIWKEFRKAFWDKFYLCSF

TYK27664.1 uncharacterized protein E5676_scaffold93G00280 [Cucumis melo var. makuwa]6.1e-2865.31Show/hide
Query:  ANRALESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATF
        ANRA   D++SSNPH T  QN+EES FN FA+RVADH+ P    V+KR  IER+KALGATTFEGT  PT+ +KWL+L EKCF VM+CP E KVKLA F
Subjt:  ANRALESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATF

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein1.2e-2955.22Show/hide
Query:  ESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAE
        ESD  SS PHV  E N+EE   +  AQR+   I       +K++ IERLKALGATTF GTTNP DAE+WLTLIEKCF V  C  + KV+LA FLLQ  AE
Subjt:  ESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAE

Query:  DCWKFHAARAGRPSFIIWKEFRKAFWDKFYLCSF
        D W    +R      +IW EF+KAF+DKFY  SF
Subjt:  DCWKFHAARAGRPSFIIWKEFRKAFWDKFYLCSF

A0A5A7UFQ1 Uncharacterized protein5.0e-2865.31Show/hide
Query:  ANRALESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATF
        ANRA   D++SSNPH T  QN+EES FN FAQRVADH+ P    V+KR  IER+KALGAT FEGT  PT+ +KWL+L EKCF VM+CP E KVKLA F
Subjt:  ANRALESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATF

A0A5D3BB91 Reverse transcriptase8.6e-2852.24Show/hide
Query:  ESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAE
        ESD  SS P V  E+N+EE   +  AQR+   I       +K++  ERLKALGATTF GTTNPTD E WLTLIEKCF V     + KV+LA FLLQ  AE
Subjt:  ESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAE

Query:  DCWKFHAARAGRPSFIIWKEFRKAFWDKFYLCSF
        D W+   +R      + W EF+KAF+DKFY  SF
Subjt:  DCWKFHAARAGRPSFIIWKEFRKAFWDKFYLCSF

A0A5D3BTQ7 Uncharacterized protein4.1e-3067.62Show/hide
Query:  ISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAEDCWK
        +SSNPH    QN EES F  F+QR+  H TP+  AV+KRF IERLKALGATTFEGTTNP + EKWL+LIEK FGVM+C  E  VKLAT LLQGS ED W 
Subjt:  ISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAEDCWK

Query:  FHAAR
        FH AR
Subjt:  FHAAR

A0A5D3DVY7 Uncharacterized protein2.9e-2865.31Show/hide
Query:  ANRALESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATF
        ANRA   D++SSNPH T  QN+EES FN FA+RVADH+ P    V+KR  IER+KALGATTFEGT  PT+ +KWL+L EKCF VM+CP E KVKLA F
Subjt:  ANRALESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCTAATAGAGCATTAGAATCGGATAAAATATCGAGTAATCCTCATGTTACAACTGAGCAAAACATAGAAGAAAGTAGGTTTAATTGTTTTGCTCAGAGAGTGGC
GGACCACATTACGCCATGGAACCTTGCAGTAGACAAGAGGTTCGTCATCGAAAGGTTGAAGGCGTTGGGAGCAACGACCTTCGAAGGGACCACTAATCCGACCGACGCGG
AGAAGTGGTTGACCTTGATTGAGAAGTGTTTTGGGGTGATGGAGTGCCCCAATGAAAATAAGGTGAAATTAGCAACATTTCTGTTGCAAGGAAGTGCTGAAGATTGTTGG
AAATTCCATGCGGCGAGAGCGGGTAGACCAAGTTTCATTATTTGGAAAGAGTTTAGAAAGGCGTTTTGGGACAAGTTTTACCTGTGTTCTTTTGTGACGCGAAGAGAAAT
TAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCTAATAGAGCATTAGAATCGGATAAAATATCGAGTAATCCTCATGTTACAACTGAGCAAAACATAGAAGAAAGTAGGTTTAATTGTTTTGCTCAGAGAGTGGC
GGACCACATTACGCCATGGAACCTTGCAGTAGACAAGAGGTTCGTCATCGAAAGGTTGAAGGCGTTGGGAGCAACGACCTTCGAAGGGACCACTAATCCGACCGACGCGG
AGAAGTGGTTGACCTTGATTGAGAAGTGTTTTGGGGTGATGGAGTGCCCCAATGAAAATAAGGTGAAATTAGCAACATTTCTGTTGCAAGGAAGTGCTGAAGATTGTTGG
AAATTCCATGCGGCGAGAGCGGGTAGACCAAGTTTCATTATTTGGAAAGAGTTTAGAAAGGCGTTTTGGGACAAGTTTTACCTGTGTTCTTTTGTGACGCGAAGAGAAAT
TAATTCTTGA
Protein sequenceShow/hide protein sequence
MGANRALESDKISSNPHVTTEQNIEESRFNCFAQRVADHITPWNLAVDKRFVIERLKALGATTFEGTTNPTDAEKWLTLIEKCFGVMECPNENKVKLATFLLQGSAEDCW
KFHAARAGRPSFIIWKEFRKAFWDKFYLCSFVTRREINS