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PI0004489 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004489
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr09:12388191..12388391
RNA-Seq ExpressionPI0004489
SyntenyPI0004489
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038969.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-1263.64Show/hide
Query:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN
        M+ DV  EAAM+E ERKINF+MK I+++DHEI+ L+DHMKARE  E S+TPA KA +KGKV+LQ++
Subjt:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN

KAA0045986.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.5e-1365.15Show/hide
Query:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN
        M++DV  EA M EMERKINF+MK ++E+DHEI+AL+D MKA E AELS+TP  KA +KGK VLQ+N
Subjt:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN

KAA0065384.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.5e-1365.15Show/hide
Query:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN
        M+ D+  EAAM EMERKINF+MKA++E+DHEI+ALR+ M+ RE AE SQTP  KA +KGK V+QKN
Subjt:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN

KAA0067627.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.1e-1368.18Show/hide
Query:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN
        M+  V  EA MVEMERKINF+MK ++EQDHEI+AL+D MKA E  ELS+TPA KA +KGKVVLQ+N
Subjt:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN

TYK11178.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-1263.64Show/hide
Query:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN
        M+ DV  EAAM+E ERKINF+MK I+++DHEI+ L+DHMKARE  E S+TPA KA +KGKV+LQ++
Subjt:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN

TrEMBL top hitse value%identityAlignment
A0A5A7TCF9 Ty3-gypsy retrotransposon protein5.9e-1363.64Show/hide
Query:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN
        M+ DV  EAAM+E ERKINF+MK I+++DHEI+ L+DHMKARE  E S+TPA KA +KGKV+LQ++
Subjt:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN

A0A5A7TV17 Ty3-gypsy retrotransposon protein2.6e-1365.15Show/hide
Query:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN
        M++DV  EA M EMERKINF+MK ++E+DHEI+AL+D MKA E AELS+TP  KA +KGK VLQ+N
Subjt:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN

A0A5A7VDN4 Ty3-gypsy retrotransposon protein2.6e-1365.15Show/hide
Query:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN
        M+ D+  EAAM EMERKINF+MKA++E+DHEI+ALR+ M+ RE AE SQTP  KA +KGK V+QKN
Subjt:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN

A0A5A7VKD9 Ty3-gypsy retrotransposon protein3.5e-1368.18Show/hide
Query:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN
        M+  V  EA MVEMERKINF+MK ++EQDHEI+AL+D MKA E  ELS+TPA KA +KGKVVLQ+N
Subjt:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN

A0A5D3CJ11 Ty3-gypsy retrotransposon protein5.9e-1363.64Show/hide
Query:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN
        M+ DV  EAAM+E ERKINF+MK I+++DHEI+ L+DHMKARE  E S+TPA KA +KGKV+LQ++
Subjt:  MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTAGATGTAGCAGATGAAGCAGCCATGGTAGAGATGGAGAGAAAAATAAATTTCGTAATGAAAGCTATCAAGGAGCAAGATCATGAAATCTCTGCCTTGAGAGA
TCATATGAAGGCTCGTGAAATTGCTGAGTTGAGCCAAACTCCTGCTGCCAAAGCTAAGAATAAAGGAAAAGTTGTGTTGCAGAAAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGTAGATGTAGCAGATGAAGCAGCCATGGTAGAGATGGAGAGAAAAATAAATTTCGTAATGAAAGCTATCAAGGAGCAAGATCATGAAATCTCTGCCTTGAGAGA
TCATATGAAGGCTCGTGAAATTGCTGAGTTGAGCCAAACTCCTGCTGCCAAAGCTAAGAATAAAGGAAAAGTTGTGTTGCAGAAAAACTAG
Protein sequenceShow/hide protein sequence
MIVDVADEAAMVEMERKINFVMKAIKEQDHEISALRDHMKAREIAELSQTPAAKAKNKGKVVLQKN