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PI0004522 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004522
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein SAMBA isoform X1
Genome locationchr04:32400664..32403349
RNA-Seq ExpressionPI0004522
SyntenyPI0004522
Gene Ontology termsGO:0046621 - negative regulation of organ growth (biological process)
GO:0010997 - anaphase-promoting complex binding (molecular function)
InterPro domainsIPR037547 - Protein SAMBA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136197.1 protein SAMBA isoform X1 [Cucumis sativus]1.7e-5499.12Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNTPSPANSSVSTTAVAGRCSTNAA+SLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKRKEGNGSD
        SKRQKRKEGNGSD
Subjt:  SKRQKRKEGNGSD

XP_008466002.1 PREDICTED: uncharacterized protein LOC103503566 isoform X1 [Cucumis melo]5.4e-5396.46Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNTPSPANSS STTAVAGRCSTNAA+SLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQV LS
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKRKEGNGSD
        SKR KRKEGNGSD
Subjt:  SKRQKRKEGNGSD

XP_022131247.1 protein SAMBA isoform X1 [Momordica charantia]1.2e-4990.27Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MN+ SPANSS+STTAVAGRCSTNAAMS+DDFRFP+NLIS+PERKDEAM+ALKSNIMAALNKEVKSLDDD+WMFEGPRSRINLMSRQGANC+AIPYQVVLS
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKRKEGNGSD
        SKRQKR+E NGSD
Subjt:  SKRQKRKEGNGSD

XP_023553751.1 protein SAMBA isoform X1 [Cucurbita pepo subsp. pepo]8.9e-4888.29Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNT SPANSS+STT VAGRC+TNAAMSLDDFRFP+NL+S+ ERKDEAM+ALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQV++S
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKRKEGNG
        SKRQKRK+ NG
Subjt:  SKRQKRKEGNG

XP_038888367.1 protein SAMBA isoform X1 [Benincasa hispida]6.0e-5294.69Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNT SPANSS+STTAVAGRCSTNAAMSLDDFRFP+NLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMS+QGANCHAIPYQVV+S
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKRKEGNGSD
        SKRQKRKE NGSD
Subjt:  SKRQKRKEGNGSD

TrEMBL top hitse value%identityAlignment
A0A0A0LK11 Uncharacterized protein6.3e-3998.85Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG
        MNTPSPANSSVSTTAVAGRCSTNAA+SLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG

A0A1S3CQ80 uncharacterized protein LOC103503566 isoform X12.6e-5396.46Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNTPSPANSS STTAVAGRCSTNAA+SLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQV LS
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKRKEGNGSD
        SKR KRKEGNGSD
Subjt:  SKRQKRKEGNGSD

A0A6J1BQF8 protein SAMBA isoform X16.0e-5090.27Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MN+ SPANSS+STTAVAGRCSTNAAMS+DDFRFP+NLIS+PERKDEAM+ALKSNIMAALNKEVKSLDDD+WMFEGPRSRINLMSRQGANC+AIPYQVVLS
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKRKEGNGSD
        SKRQKR+E NGSD
Subjt:  SKRQKRKEGNGSD

A0A6J1HIC3 protein SAMBA isoform X11.6e-4787.39Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNT SPANSS+STT VAGRC+TNAAMSLDDFRFP+NL+S+ ERKDEAM+ALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQV++S
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKRKEGNG
        SKRQKRK+ +G
Subjt:  SKRQKRKEGNG

A0A6J1HU80 protein SAMBA isoform X16.9e-4686.49Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        M T SPANSS+STT VAGRC+TNAAMSLDDFRFP+NL+S+ ERKDEAM+ALKSNIMAALNKEVKSLDDDNWMFEGPRSRINL SRQGANCHAIPYQVV+S
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKRKEGNG
        SKR KRK+ NG
Subjt:  SKRQKRKEGNG

SwissProt top hitse value%identityAlignment
Q9C613 Protein SAMBA6.7e-2263.64Show/hide
Query:  MNTPSPANSSVSTTAVA-GRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG
        MN  SPA+S VSTTAVA G  S+ AA  LDDF FP ++ S+ ERKDEAM  LK+++M  L+KEVKSL++D+WMFEGPRSRI+L+SR+G
Subjt:  MNTPSPANSSVSTTAVA-GRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG

Arabidopsis top hitse value%identityAlignment
AT1G32310.1 unknown protein4.8e-2363.64Show/hide
Query:  MNTPSPANSSVSTTAVA-GRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG
        MN  SPA+S VSTTAVA G  S+ AA  LDDF FP ++ S+ ERKDEAM  LK+++M  L+KEVKSL++D+WMFEGPRSRI+L+SR+G
Subjt:  MNTPSPANSSVSTTAVA-GRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACCCCGTCCCCAGCCAATTCTTCCGTTTCCACCACGGCGGTTGCCGGAAGGTGTAGCACTAACGCCGCAATGTCGCTTGACGATTTTCGCTTCCCCTCTAATTT
AATTTCCGTACCAGAGCGCAAGGACGAGGCGATGACCGCTCTTAAATCTAATATAATGGCTGCACTGAATAAGGAGGTCAAATCCCTAGATGATGATAACTGGATGTTTG
AAGGTCCTCGCTCCCGTATCAACCTTATGTCACGACAAGGTGCTAATTGCCATGCAATTCCCTATCAGGTGGTGCTTTCCTCAAAAAGACAGAAGAGAAAAGAAGGTAAT
GGATCAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATTTGAACTTTTTTCCAATTGAGAACAGAAAATTCAAAGCCCTAATCTTCTCCATTCCTGAATCCAATGAATACCCCGTCCCCAGCCAATTCTTCCGTTTCCACCACGGC
GGTTGCCGGAAGGTGTAGCACTAACGCCGCAATGTCGCTTGACGATTTTCGCTTCCCCTCTAATTTAATTTCCGTACCAGAGCGCAAGGACGAGGCGATGACCGCTCTTA
AATCTAATATAATGGCTGCACTGAATAAGGAGGTCAAATCCCTAGATGATGATAACTGGATGTTTGAAGGTCCTCGCTCCCGTATCAACCTTATGTCACGACAAGGTGCT
AATTGCCATGCAATTCCCTATCAGGTGGTGCTTTCCTCAAAAAGACAGAAGAGAAAAGAAGGTAATGGATCAGATTGATGAGAATGATCTTCATCTTGTAGAAATCTTGT
GATTGTGCTGCCTTTGGACAATACTGGGTTTCATTTATCCAATCAAGTAATCAATTCCTCTTTTTCAATCTATAATTTTTTTTTCTGTAGATGTAAAGGGTTTGCAAATA
CTTGTCCAAATGAAATCTTGCTTCTTACATAGGATTACGTGAAACACCACTTCTGACCTCTTATTAGGTCAATTTTGTCAAGTGCTTAAAAAAATGTTTTTAAGCACTTA
AAATGTCAATCAAATAGATTCTTAACATCGATGAAAGGATTTAATTCATCCATCAGACATACAGATCTAGTGCTGTTGGCATCCCATAATTGACGATTAATTCATAAAAC
ATCTCATCTTAGGCTCATGGAGATCTGTACCTTAATTGAAATTTAATGGAATTCTTGTGGTATTTTATAAAGTTGTCAATTTATA
Protein sequenceShow/hide protein sequence
MNTPSPANSSVSTTAVAGRCSTNAAMSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLSSKRQKRKEGN
GSD