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PI0004524 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004524
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr08:1594544..1594708
RNA-Seq ExpressionPI0004524
SyntenyPI0004524
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.0e-1370.37Show/hide
Query:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
        MTN DI +++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE MF+DWELRNQ
Subjt:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
KAA0067286.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.4e-1370.37Show/hide
Query:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
        MTN DI +D+DE DST+ATT  ++IHYIETS+ WS+WRD+LAE MFSDWEL NQ
Subjt:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-1372.22Show/hide
Query:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
        MTN DI +++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE MFSDWELRNQ
Subjt:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.5e-1372.22Show/hide
Query:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
        MTN DI +++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE MFSDWELRNQ
Subjt:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
TYK10899.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.4e-1370.37Show/hide
Query:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
        MTN DI +D+DE DST+ATT  ++IHYIETS+ WS+WRD+LAE MFSDWEL NQ
Subjt:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7UIM7 Putative nuclease HARBI19.7e-1470.37Show/hide
Query:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
        MTN DI +++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE MF+DWELRNQ
Subjt:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
A0A5A7VJX3 Retrotransposon protein7.4e-1472.22Show/hide
Query:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
        MTN DI +++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE MFSDWELRNQ
Subjt:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
A0A5A7VLF4 Putative nuclease HARBI11.7e-1370.37Show/hide
Query:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
        MTN DI +D+DE DST+ATT  ++IHYIETS+ WS+WRD+LAE MFSDWEL NQ
Subjt:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
A0A5D3BL48 Putative nuclease HARBI17.4e-1472.22Show/hide
Query:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
        MTN DI +++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE MFSDWELRNQ
Subjt:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
A0A5D3CKZ1 Putative nuclease HARBI11.7e-1370.37Show/hide
Query:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
        MTN DI +D+DE DST+ATT  ++IHYIETS+ WS+WRD+LAE MFSDWEL NQ
Subjt:  MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAACACTGACATACCGAATGACGTTGATGAAGGTGACTCTACATACGCCACCACTGGCGGTGAAGAAATTCACTACATAGAGACGTCAAGTGCATGGAGTCAATG
GAGGGATGAGCTTGCAGAAAGAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAACACTGACATACCGAATGACGTTGATGAAGGTGACTCTACATACGCCACCACTGGCGGTGAAGAAATTCACTACATAGAGACGTCAAGTGCATGGAGTCAATG
GAGGGATGAGCTTGCAGAAAGAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNTDIPNDVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQ