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PI0004533 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004533
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-type domain-containing protein
Genome locationchr06:24069424..24069984
RNA-Seq ExpressionPI0004533
SyntenyPI0004533
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33914.1 hypothetical protein [Cucumis melo subsp. melo]2.3e-6488.61Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-
        MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD 
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-

Query:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV
        MERSESN WRE MERT MIEKVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FP+
Subjt:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV

KAA0060638.1 putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]1.1e-8791.05Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-
        MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD 
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-

Query:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDKC
        MERSESN WRE MERT MIEKVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDKC
Subjt:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDKC

KAG6600727.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]2.6e-5261.66Show/hide
Query:  MIPQAL-TVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRILHQTSSHGRDMER
        MIPQAL TVPQSNPPPS LPFLTAFS+VIV+ ISI+IFS++ASF+IIIFI+V+CQYLIG  +LD H  D+EAGE N+NQ    R R L         + R
Subjt:  MIPQAL-TVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRILHQTSSHGRDMER

Query:  SESNAWRESMERT---------TMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVN
         ESN WRE++ERT          ++ K+A  V YG SE  AK  DCAICLE+FENGE CQ F VC HIFHYSCIQ WL++NMTCPICR  I N
Subjt:  SESNAWRESMERT---------TMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVN

TYK02232.1 putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]1.0e-6489.24Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-
        MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD 
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-

Query:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV
        MERSESN WRE MERT MIEKVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FPV
Subjt:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV

XP_011652743.1 uncharacterized protein LOC105435076 [Cucumis sativus]1.8e-6156.34Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-
        MIPQALTVPQSNPPPSILPFLTAFS+VIV+FI+IIIFSVVASFAII+ IYVIC+YLIG  SLD H S+LEAGE NENQ MITRSRIL   HQTSSHGRD 
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-

Query:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQK---------------------------------------------
        MERSESNAWRE MERT MIEKVAAPVSYGSSEA  KCIDCAICLEDFENGELCQ                                              
Subjt:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQK---------------------------------------------

Query:  --------------------------------------FPVCNHIFHYSCIQHWLKKNMTCPICRCSI
                                              FP C HIFH  CI +WL+ N TCPICR  +
Subjt:  --------------------------------------FPVCNHIFHYSCIQHWLKKNMTCPICRCSI

TrEMBL top hitse value%identityAlignment
A0A0A0L6M6 RING-type domain-containing protein1.8e-8388.3Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-
        MIPQALTVPQSNPPPSILPFLTAFS+VIV+FI+IIIFSVVASFAII+ IYVIC+YLIG  SLD H S+LEAGE NENQ MITRSRIL   HQTSSHGRD 
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-

Query:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND
        MERSESNAWRE MERT MIEKVAAPVSYGSSEA  KCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND
Subjt:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND

A0A251PMJ1 RING-type domain-containing protein4.8e-2034.92Show/hide
Query:  PPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETN----------ENQRMITRSRILHQTSSHGRDME-----
        PP +   LT    +I V++ II FS++ S  +I   YV+C+++  P   +    D EAG+             +Q    ++ +LH      R +E     
Subjt:  PPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETN----------ENQRMITRSRILHQTSSHGRDME-----

Query:  ---RSESNAWRESMERTTMIE-KVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVN
             E    R   +R  ++E K+  P++YGS E    C DC IC+EDFE  +LCQ FP CNH FH  C+  WLKK++TCPICR S+++
Subjt:  ---RSESNAWRESMERTTMIE-KVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVN

A0A5A7UZF7 Putative RING-H2 finger protein ATL195.4e-8891.05Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-
        MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD 
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-

Query:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDKC
        MERSESN WRE MERT MIEKVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDKC
Subjt:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDKC

A0A5D3BTV2 Putative RING-H2 finger protein ATL194.9e-6589.24Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-
        MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD 
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-

Query:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV
        MERSESN WRE MERT MIEKVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FPV
Subjt:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV

E5GBS2 Uncharacterized protein1.1e-6488.61Show/hide
Query:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-
        MIPQALTVPQSNPPPSILPFLTAFS+VIV+FISIIIFSVVASFAIIIFIY+IC+YLIG  SLDEH SDLEAGETNENQRMI RSRIL   HQTSSHGRD 
Subjt:  MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRIL---HQTSSHGRD-

Query:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV
        MERSESN WRE MERT MIEKVAAPVSYGSSE VAKCIDCAICLEDFENGELCQ FP+
Subjt:  MERSESNAWRESMERTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPV

SwissProt top hitse value%identityAlignment
Q67YI6 RING-H2 finger protein ATL653.3e-1044.44Show/hide
Query:  AVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        + A C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR +I+
Subjt:  AVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

Q8RX29 RING-H2 finger protein ATL701.7e-0942.37Show/hide
Query:  VSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCS
        + Y  ++       CAICL D++   L ++ P CNH+FH  CI  WL+ N TCP+CR S
Subjt:  VSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCS

Q8W571 RING-H2 finger protein ATL327.4e-1042.19Show/hide
Query:  VAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSI
        V A  S   S+  +K ++CAICL + E+ E  +  P+CNH+FH  CI  WL  + TCP+CR ++
Subjt:  VAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSI

Q9LZV8 RING-H2 finger protein ATL742.6e-1047.46Show/hide
Query:  YGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        YGS E      +CAICL +F +GE  +  P CNH FH SCI  WL  + +CP CR S++
Subjt:  YGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

Q9SG96 RING-H2 finger protein ATL721.7e-0938.24Show/hide
Query:  RILHQTSSHGRDMERSESNAWRESMERTTMIEKVA---APVS-YGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCS
        RI  + +S  +    S +NA    +   T ++K A    PV  YGS     K  +C ICL DFE+GE  +  P CNH FH  CI  WL    +CP CR S
Subjt:  RILHQTSSHGRDMERSESNAWRESMERTTMIEKVA---APVS-YGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCS

Query:  IV
        ++
Subjt:  IV

Arabidopsis top hitse value%identityAlignment
AT3G10910.1 RING/U-box superfamily protein1.2e-1038.24Show/hide
Query:  RILHQTSSHGRDMERSESNAWRESMERTTMIEKVA---APVS-YGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCS
        RI  + +S  +    S +NA    +   T ++K A    PV  YGS     K  +C ICL DFE+GE  +  P CNH FH  CI  WL    +CP CR S
Subjt:  RILHQTSSHGRDMERSESNAWRESMERTTMIEKVA---APVS-YGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCS

Query:  IV
        ++
Subjt:  IV

AT3G18930.1 RING/U-box superfamily protein2.4e-1144.44Show/hide
Query:  AVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        + A C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR +I+
Subjt:  AVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

AT3G18930.2 RING/U-box superfamily protein2.4e-1144.44Show/hide
Query:  AVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        + A C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR +I+
Subjt:  AVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

AT4G40070.1 RING/U-box superfamily protein5.3e-1142.19Show/hide
Query:  VAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSI
        V A  S   S+  +K ++CAICL + E+ E  +  P+CNH+FH  CI  WL  + TCP+CR ++
Subjt:  VAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSI

AT5G01880.1 RING/U-box superfamily protein1.8e-1147.46Show/hide
Query:  YGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        YGS E      +CAICL +F +GE  +  P CNH FH SCI  WL  + +CP CR S++
Subjt:  YGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCCTCAAGCTCTTACTGTTCCACAATCCAACCCTCCTCCTTCAATCCTCCCTTTCCTCACCGCATTTTCGGTTGTAATTGTCGTCTTCATCTCCATCATCATCTT
CTCTGTCGTTGCTTCCTTTGCCATCATCATCTTCATCTATGTCATTTGCCAATACCTAATTGGGCCAAGGAGTTTAGATGAACACGGTTCCGACCTTGAAGCCGGTGAGA
CAAACGAAAACCAAAGGATGATCACCAGGAGTAGGATTTTGCATCAAACAAGTAGTCATGGGAGAGACATGGAGAGGTCAGAAAGCAATGCATGGAGGGAAAGCATGGAG
AGAACAACAATGATAGAAAAAGTGGCCGCGCCGGTGAGCTATGGGAGCTCGGAGGCGGTGGCGAAATGCATTGATTGTGCAATATGTTTGGAGGATTTTGAAAATGGAGA
GCTTTGCCAAAAATTTCCAGTGTGTAATCATATTTTTCATTATTCTTGTATTCAACATTGGTTGAAAAAGAACATGACTTGTCCCATTTGTCGCTGTTCTATTGTCAATG
ATAAATGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCCTCAAGCTCTTACTGTTCCACAATCCAACCCTCCTCCTTCAATCCTCCCTTTCCTCACCGCATTTTCGGTTGTAATTGTCGTCTTCATCTCCATCATCATCTT
CTCTGTCGTTGCTTCCTTTGCCATCATCATCTTCATCTATGTCATTTGCCAATACCTAATTGGGCCAAGGAGTTTAGATGAACACGGTTCCGACCTTGAAGCCGGTGAGA
CAAACGAAAACCAAAGGATGATCACCAGGAGTAGGATTTTGCATCAAACAAGTAGTCATGGGAGAGACATGGAGAGGTCAGAAAGCAATGCATGGAGGGAAAGCATGGAG
AGAACAACAATGATAGAAAAAGTGGCCGCGCCGGTGAGCTATGGGAGCTCGGAGGCGGTGGCGAAATGCATTGATTGTGCAATATGTTTGGAGGATTTTGAAAATGGAGA
GCTTTGCCAAAAATTTCCAGTGTGTAATCATATTTTTCATTATTCTTGTATTCAACATTGGTTGAAAAAGAACATGACTTGTCCCATTTGTCGCTGTTCTATTGTCAATG
ATAAATGCTGA
Protein sequenceShow/hide protein sequence
MIPQALTVPQSNPPPSILPFLTAFSVVIVVFISIIIFSVVASFAIIIFIYVICQYLIGPRSLDEHGSDLEAGETNENQRMITRSRILHQTSSHGRDMERSESNAWRESME
RTTMIEKVAAPVSYGSSEAVAKCIDCAICLEDFENGELCQKFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDKC