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PI0004555 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004555
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:15127482..15128992
RNA-Seq ExpressionPI0004555
SyntenyPI0004555
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]1.6e-3069.07Show/hide
Query:  NNRNAPPPQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGIS
        NN+N P  Q   E N AY+AHDLD+PI+SYA+PNLY+FNPGIAY  FGENV FEIK +ML M QNAGQFGGHP +DP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]4.8e-3570.37Show/hide
Query:  NNRNAPPPQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEE
        NN+  P  Q     N  Y+A D DRPIRSYA+PNLY+FNPGIAYP F EN RFEIK VMLQ+IQNAGQF  HP KDPH++IR+FYSICASFHMPGIS EE
Subjt:  NNRNAPPPQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEE

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.1e-2662.75Show/hide
Query:  MENNNRNAPP--PQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPG
        M +N  N  P    T  + N   IAH+LD PIR+Y + NLY+FN GIAY VFGEN  FE+KPVMLQMIQ AGQF G+ G+DPHEHI+SFYSICASFHM  
Subjt:  MENNNRNAPP--PQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]5.1e-3747.03Show/hide
Query:  FMSDSEQP-FELDPEIERTFRGNRRRARQRQVRRMENNNRNA-----PPPQTDPEPNA------------AYIAHDLDRPIRSYAAPNLYNFNPGIAYPV
        +MS+ + P F++DPEIERTFR   R+ +QR+  +    N +A       PQ     NA              +AHD +RP+R YA+PNLYNF PGI  P 
Subjt:  FMSDSEQP-FELDPEIERTFRGNRRRARQRQVRRMENNNRNA-----PPPQTDPEPNA------------AYIAHDLDRPIRSYAAPNLYNFNPGIAYPV

Query:  FGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDGEVQTDGQ
        F  N RFE+KPVMLQM+Q AGQFGG  G+DPH H++SF  IC++F M G+  + +R  LFP +LRDEA++WA + E GE+ T G+
Subjt:  FGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDGEVQTDGQ

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]4.5e-3346.43Show/hide
Query:  SEQPFELDPEIERTF--RGNRRRARQRQVRRMENNNRNAPPPQ---TDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMI
        ++  FE +PEI+ TF  R ++ RA +R++   +NNN  AP        P  +  ++A D + PIR+YAAPNLY+F+PGI+ P+  EN RFEIKPVM+QMI
Subjt:  SEQPFELDPEIERTF--RGNRRRARQRQVRRMENNNRNAPPPQ---TDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMI

Query:  QNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDGEVQTDGQ
        QN  QF     ++PH H+  F  +C++F +PGI+P  +R  LFP TLRD+AKRWA++LE  E+ +  Q
Subjt:  QNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDGEVQTDGQ

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein8.3e-2544.52Show/hide
Query:  MENNNRN-------APPPQTDPE--------------PNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKD
        MEN N N       AP  +TD +               N   IAH+L+ PI  YA+P+LY FN GI YP FG N RF++KP ML MIQ   QFGG+  +D
Subjt:  MENNNRN-------APPPQTDPE--------------PNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKD

Query:  PHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALE
        P +HI+S Y +C+SFH+P +S E+L    F  TL+D+ K+W   LE
Subjt:  PHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALE

A0A5A7UDN8 Uncharacterized protein7.7e-3169.07Show/hide
Query:  NNRNAPPPQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGIS
        NN+N P  Q   E N AY+AHDLD+PI+SYA+PNLY+FNPGIAY  FGENV FEIK +ML M QNAGQFGGHP +DP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 12.3e-3570.37Show/hide
Query:  NNRNAPPPQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEE
        NN+  P  Q     N  Y+A D DRPIRSYA+PNLY+FNPGIAYP F EN RFEIK VMLQ+IQNAGQF  HP KDPH++IR+FYSICASFHMPGIS EE
Subjt:  NNRNAPPPQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEE

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 15.2e-2762.75Show/hide
Query:  MENNNRNAPP--PQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPG
        M +N  N  P    T  + N   IAH+LD PIR+Y + NLY+FN GIAY VFGEN  FE+KPVMLQMIQ AGQF G+ G+DPHEHI+SFYSICASFHM  
Subjt:  MENNNRNAPP--PQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

U5CUK7 Uncharacterized protein2.5e-2149.12Show/hide
Query:  EPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRD
        E N   +A D  R IR YAAP     N GI  P   +   FE+KPVM QM+Q  GQFGG P +DPH HIRSF  +  SF + G+S E LR  LFP +LRD
Subjt:  EPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRD

Query:  EAKRWANALEDGEV
         A+ W N L    V
Subjt:  EAKRWANALEDGEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTCCTGCTTGGCAGGCGGCAAAAGAGATAGAGATATCTCCTTCGCCAAACTTATCCTTAGCATATTACTCAGAAATGACGAAATATGTGGCGGAAGCACCGAGAG
GCTGCTCGCCTTAATTAAGGGTGAAACTCAGTTTCAGTTGAATCGCGCGTTCAAACCCGAAGAACGTGAGAACAAGTTTATGAGTGACAGTGAACAACCATTTGAACTTG
ACCCTGAAATTGAGCGAACATTTCGGGGTAATCGGCGAAGAGCAAGGCAGAGACAAGTTCGTAGGATGGAAAATAACAATAGAAATGCCCCTCCGCCGCAAACTGACCCA
GAACCAAACGCCGCCTATATAGCACATGACTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTATAACTTCAACCCAGGAATCGCCTACCCTGTATTTGGCGA
GAACGTCAGGTTTGAAATCAAACCTGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGGACATCCTGGGAAAGATCCACACGAACATATAAGGAGTTTCTACT
CCATTTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCGAATGCCCTAGAA
GATGGCGAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGTCCTGCTTGGCAGGCGGCAAAAGAGATAGAGATATCTCCTTCGCCAAACTTATCCTTAGCATATTACTCAGAAATGACGAAATATGTGGCGGAAGCACCGAGAG
GCTGCTCGCCTTAATTAAGGGTGAAACTCAGTTTCAGTTGAATCGCGCGTTCAAACCCGAAGAACGTGAGAACAAGTTTATGAGTGACAGTGAACAACCATTTGAACTTG
ACCCTGAAATTGAGCGAACATTTCGGGGTAATCGGCGAAGAGCAAGGCAGAGACAAGTTCGTAGGATGGAAAATAACAATAGAAATGCCCCTCCGCCGCAAACTGACCCA
GAACCAAACGCCGCCTATATAGCACATGACTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTATAACTTCAACCCAGGAATCGCCTACCCTGTATTTGGCGA
GAACGTCAGGTTTGAAATCAAACCTGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGGACATCCTGGGAAAGATCCACACGAACATATAAGGAGTTTCTACT
CCATTTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCGAATGCCCTAGAA
GATGGCGAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAA
Protein sequenceShow/hide protein sequence
MRSCLAGGKRDRDISFAKLILSILLRNDEICGGSTERLLALIKGETQFQLNRAFKPEERENKFMSDSEQPFELDPEIERTFRGNRRRARQRQVRRMENNNRNAPPPQTDP
EPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALE
DGEVQTDGQSMPPQWHS