; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004559 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004559
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr05:18561507..18562244
RNA-Seq ExpressionPI0004559
SyntenyPI0004559
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593848.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3878.63Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATS----SHHHHHKESEPEKPPVFKKWQHPAA
        MA+S RR S T  R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNW  DS   SS++S     HHHHHKESEPEKPPVFKKWQHPAA
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATS----SHHHHHKESEPEKPPVFKKWQHPAA

Query:  PFHYDSGPRAPR-FVPV
        PFHYDSG RAPR FVPV
Subjt:  PFHYDSGPRAPR-FVPV

XP_008460625.2 PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Cucumis melo]6.8e-4883.46Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSS---------HHH------HHKESEPEKP
        MADSHRRTS TTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNW PDSREASSA+SS         HHH      HHKE E EK 
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSS---------HHH------HHKESEPEKP

Query:  PVFKKWQHPAAPFHYDSGPRAPRFVPV
        PVFKKWQHPAAPFHYDSGPRAPRFVPV
Subjt:  PVFKKWQHPAAPFHYDSGPRAPRFVPV

XP_022930471.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata]5.8e-3980.7Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATS-SHHHHHKESEPEKPPVFKKWQHPAAPFH
        MA+S RR S T  R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNW  DS   SS++S  HHHHHKESEPEKPPVFKKWQHPAAPFH
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATS-SHHHHHKESEPEKPPVFKKWQHPAAPFH

Query:  YDSGPRAPR-FVPV
        YDSG RAPR FVPV
Subjt:  YDSGPRAPR-FVPV

XP_023515028.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita pepo subsp. pepo]6.8e-4081.42Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPFHY
        MA+S RR SAT +R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNW  DS   SS+   HHHHHKESEPEKPPVFKKWQHPAAPFHY
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPFHY

Query:  DSGPRAPR-FVPV
        DSG RAPR FVPV
Subjt:  DSGPRAPR-FVPV

XP_038875425.1 uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida]4.3e-5092.86Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPFHY
        MADSHRRTS  + RHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNW PDSREASS +SS HHHHKESEPEKPPVFKKWQHPAAPFHY
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPFHY

Query:  DSGPRAPRFVPV
        DSGPRAPRFVPV
Subjt:  DSGPRAPRFVPV

TrEMBL top hitse value%identityAlignment
A0A0A0LLJ8 Uncharacterized protein9.0e-3875.61Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSP-SSPKDIQNW-MPDSREASSATSS---------HHHHHKESEPEKPPVFK
        MADSH  TS   T     PSRLQRRAPASLQINRSDWKVAIPLLSPLVSP SSPKDI +W  PDSR+ SS TSS         HHHHHKES+PEK PVFK
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSP-SSPKDIQNW-MPDSREASSATSS---------HHHHHKESEPEKPPVFK

Query:  KWQHPAAPFHYDSGPRAPRFVPV
        KWQHPAAPFHYDSG RAPRFVPV
Subjt:  KWQHPAAPFHYDSGPRAPRFVPV

A0A1S3CDB1 uncharacterized protein At4g14450, chloroplastic-like3.3e-4883.46Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSS---------HHH------HHKESEPEKP
        MADSHRRTS TTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNW PDSREASSA+SS         HHH      HHKE E EK 
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSS---------HHH------HHKESEPEKP

Query:  PVFKKWQHPAAPFHYDSGPRAPRFVPV
        PVFKKWQHPAAPFHYDSGPRAPRFVPV
Subjt:  PVFKKWQHPAAPFHYDSGPRAPRFVPV

A0A6J1ER11 uncharacterized protein At4g14450, chloroplastic-like2.8e-3980.7Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATS-SHHHHHKESEPEKPPVFKKWQHPAAPFH
        MA+S RR S T  R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNW  DS   SS++S  HHHHHKESEPEKPPVFKKWQHPAAPFH
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATS-SHHHHHKESEPEKPPVFKKWQHPAAPFH

Query:  YDSGPRAPR-FVPV
        YDSG RAPR FVPV
Subjt:  YDSGPRAPR-FVPV

A0A6J1H320 uncharacterized protein At4g14450, chloroplastic-like4.6e-3470.94Show/hide
Query:  MADSHRRTS---ATTTRHP---QQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHP
        MADSHRRTS     + RHP   QQP   + RAPASLQINR DWKVAIPLL+PLVSPSSPK+IQ W P+S E SS +S    +HKESEPEKPPVFKKWQHP
Subjt:  MADSHRRTS---ATTTRHP---QQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHP

Query:  AAPFHYDSGPRAPRFVP
        AAPF YDSGP  PRF+P
Subjt:  AAPFHYDSGPRAPRFVP

A0A6J1KKB8 uncharacterized protein At4g14450, chloroplastic-like1.4e-3878.45Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATS---SHHHHHKESEPEKPPVFKKWQHPAAP
        MA+S RR S    R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNW  DS   SS++S    HHHHHKESEPEKPPVFKKWQHPAAP
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATS---SHHHHHKESEPEKPPVFKKWQHPAAP

Query:  FHYDSGPRAPR-FVPV
        FHYDSG RAPR FVPV
Subjt:  FHYDSGPRAPR-FVPV

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic6.9e-1139.47Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPF
        MA + +RTS++   + +Q S+LQRRAP+ +    + S+W VAIPLLSPL    +    Q+ +P  +  +           E E +K PVFKKWQHPA+PF
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPF

Query:  HYDSGPRAPRFVPV
         Y+     P F+ V
Subjt:  HYDSGPRAPRFVPV

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein3.8e-1244.34Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQIN--RSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPF
        M+ + R  S +  R   + SRLQRRAP  L+IN   ++WKVAIPLLSP  SP              +   A           E EKPPVFKKWQHPAAPF
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASLQIN--RSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPF

Query:  HYDSGP
        +Y   P
Subjt:  HYDSGP

AT3G23170.1 unknown protein1.1e-1147.06Show/hide
Query:  QQPSRLQRRAPASLQI----NRSDWKVAIPLLSPL-VSP-SSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFV
        +QPSRL +R PA   +      ++W  AIPLLSPL +SP SSP D     P  +  S+A +           EK PVFKKWQHPAAPF+Y+S    P FV
Subjt:  QQPSRLQRRAPASLQI----NRSDWKVAIPLLSPL-VSP-SSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFV

Query:  PV
        PV
Subjt:  PV

AT4G14450.1 unknown protein4.9e-1239.47Show/hide
Query:  MADSHRRTSATTTRHPQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPF
        MA + +RTS++   + +Q S+LQRRAP+ +    + S+W VAIPLLSPL    +    Q+ +P  +  +           E E +K PVFKKWQHPA+PF
Subjt:  MADSHRRTSATTTRHPQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPF

Query:  HYDSGPRAPRFVPV
         Y+     P F+ V
Subjt:  HYDSGPRAPRFVPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACTCACACCGACGAACCTCCGCCACCACTACCCGCCATCCCCAGCAACCAAGCCGTCTTCAACGCCGCGCTCCGGCGTCCCTCCAAATCAATCGCTCCGATTG
GAAGGTTGCCATCCCTCTCTTGTCCCCCCTCGTCTCTCCTTCCTCTCCCAAAGATATCCAAAATTGGATGCCCGATTCCAGAGAAGCCTCCTCCGCTACTTCTTCTCATC
ATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTCAAGAAATGGCAGCATCCCGCGGCTCCATTTCATTACGATTCCGGTCCTAGGGCTCCCAGATTCGTA
CCCGTTTAG
mRNA sequenceShow/hide mRNA sequence
CTCATCCTTCTTATCTTCTTCCCCTAAATTTCTCCTTTCCTCCTTTTCCCCCTTTCTCTTATCTTATGGCCGACTCACACCGACGAACCTCCGCCACCACTACCCGCCAT
CCCCAGCAACCAAGCCGTCTTCAACGCCGCGCTCCGGCGTCCCTCCAAATCAATCGCTCCGATTGGAAGGTTGCCATCCCTCTCTTGTCCCCCCTCGTCTCTCCTTCCTC
TCCCAAAGATATCCAAAATTGGATGCCCGATTCCAGAGAAGCCTCCTCCGCTACTTCTTCTCATCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTCA
AGAAATGGCAGCATCCCGCGGCTCCATTTCATTACGATTCCGGTCCTAGGGCTCCCAGATTCGTACCCGTTTAGGTTTTTTTTTCTTTTTTTTTTTTTAAAAAAATAAAA
TCTCTTGAAATTGATCTGTAATCATAAGAATTTGTAGTCTGTAGATCTAACGGTCTGTTTTTGACGAGCTTATTGACTGCAACTTATGCTTAACCACACTTGATTATTTG
TACATTGGTTTTATTATTATTATTATTATTATTATTTGGTCACATCACTCATTACACTGTTTAACGTTTAGATTGAAAGTCACATTTACCAATCAATAATTTAAGCTATA
ATGTGGAGTCGTAGTTACCAACGCATTTTATTTTCCACAAATATTAATTTATATCATAATTCCAATTTTGTTTTTAAC
Protein sequenceShow/hide protein sequence
MADSHRRTSATTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWMPDSREASSATSSHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFV
PV