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PI0004560 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004560
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr08:12656605..12656934
RNA-Seq ExpressionPI0004560
SyntenyPI0004560
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060707.1 hypothetical protein E6C27_scaffold496G00110 [Cucumis melo var. makuwa]1.6e-3387.1Show/hide
Query:  MSSPATLMATSRNILPLEPTTLTNKALP-FIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSSPSPIRNNVKC
        MSSP TLMATSRN LPLEPTTLTN ALP FIQRSSRHL TTTTPTSR S+SLKLSK KQEQTST THSTL SCKPKGPVRWSSPSP+RNNV+C
Subjt:  MSSPATLMATSRNILPLEPTTLTNKALP-FIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSSPSPIRNNVKC

KAG6595583.1 hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sororia]6.9e-0539Show/hide
Query:  LLFIYLFFFIMSSPATLMATSRNILPLEPTTLTNKALPFIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSSPSPIRNNV
        L  I+    ++SSP+T++ATSR++L L+            + S         PTS   D+L L    +     +  S ++SCKPKGPVRWSSPSPIRNN+
Subjt:  LLFIYLFFFIMSSPATLMATSRNILPLEPTTLTNKALPFIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSSPSPIRNNV

KGN54790.1 hypothetical protein Csa_012154 [Cucumis sativus]2.5e-3172.73Show/hide
Query:  MTLRCFPLLFIYLFFFIMSSPATL-MATSRNILPLEPTTLTNKALPFIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSS
        M LRCFP LFIYLF FIMSS   L MATSRN+LPL PTTLTN ALPF Q+SSR+L  TTT T  HS +LK+ KE QEQTST+THSTLQSC PKGP+ WSS
Subjt:  MTLRCFPLLFIYLFFFIMSSPATL-MATSRNILPLEPTTLTNKALPFIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSS

Query:  PSPIRNNVKC
        PSP RN V+C
Subjt:  PSPIRNNVKC

KGN54792.1 hypothetical protein Csa_012277 [Cucumis sativus]1.0e-4084.55Show/hide
Query:  MTLRCFPLLFIYLFF-FIMSSPATLMATSRNILPLEPTTLTNKALPFIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSS
        MT RCFP LFIYLFF FIMSSP TLMATSRNILPLEPTTLTN AL F+QRSSRHL TTTTPTSR S+SLKLSK + EQTST THSTLQSCKPKGP+RWSS
Subjt:  MTLRCFPLLFIYLFF-FIMSSPATLMATSRNILPLEPTTLTNKALPFIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSS

Query:  PSPIRNNVKC
        PSP+RNN+KC
Subjt:  PSPIRNNVKC

TrEMBL top hitse value%identityAlignment
A0A0A0KYN0 Uncharacterized protein1.2e-3172.73Show/hide
Query:  MTLRCFPLLFIYLFFFIMSSPATL-MATSRNILPLEPTTLTNKALPFIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSS
        M LRCFP LFIYLF FIMSS   L MATSRN+LPL PTTLTN ALPF Q+SSR+L  TTT T  HS +LK+ KE QEQTST+THSTLQSC PKGP+ WSS
Subjt:  MTLRCFPLLFIYLFFFIMSSPATL-MATSRNILPLEPTTLTNKALPFIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSS

Query:  PSPIRNNVKC
        PSP RN V+C
Subjt:  PSPIRNNVKC

A0A0A0L2F6 Uncharacterized protein4.9e-4184.55Show/hide
Query:  MTLRCFPLLFIYLFF-FIMSSPATLMATSRNILPLEPTTLTNKALPFIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSS
        MT RCFP LFIYLFF FIMSSP TLMATSRNILPLEPTTLTN AL F+QRSSRHL TTTTPTSR S+SLKLSK + EQTST THSTLQSCKPKGP+RWSS
Subjt:  MTLRCFPLLFIYLFF-FIMSSPATLMATSRNILPLEPTTLTNKALPFIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSS

Query:  PSPIRNNVKC
        PSP+RNN+KC
Subjt:  PSPIRNNVKC

A0A5A7V1K1 Uncharacterized protein7.6e-3487.1Show/hide
Query:  MSSPATLMATSRNILPLEPTTLTNKALP-FIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSSPSPIRNNVKC
        MSSP TLMATSRN LPLEPTTLTN ALP FIQRSSRHL TTTTPTSR S+SLKLSK KQEQTST THSTL SCKPKGPVRWSSPSP+RNNV+C
Subjt:  MSSPATLMATSRNILPLEPTTLTNKALP-FIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSSPSPIRNNVKC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTAAGGTGTTTTCCTTTACTTTTCATATACTTGTTCTTCTTCATCATGTCTTCTCCTGCAACCTTGATGGCAACTTCAAGAAACATCCTCCCTTTAGAACCCAC
GACATTGACTAATAAGGCATTACCCTTCATTCAACGATCATCTCGACACCTAACTACAACTACAACTCCTACTTCTCGTCACTCTGACTCTCTTAAACTTTCTAAAGAAA
AGCAAGAACAAACGTCGACGGTGACTCATTCAACCCTTCAAAGTTGCAAGCCAAAAGGACCTGTTAGATGGTCTTCTCCTAGTCCAATACGTAATAATGTGAAATGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTTAAGGTGTTTTCCTTTACTTTTCATATACTTGTTCTTCTTCATCATGTCTTCTCCTGCAACCTTGATGGCAACTTCAAGAAACATCCTCCCTTTAGAACCCAC
GACATTGACTAATAAGGCATTACCCTTCATTCAACGATCATCTCGACACCTAACTACAACTACAACTCCTACTTCTCGTCACTCTGACTCTCTTAAACTTTCTAAAGAAA
AGCAAGAACAAACGTCGACGGTGACTCATTCAACCCTTCAAAGTTGCAAGCCAAAAGGACCTGTTAGATGGTCTTCTCCTAGTCCAATACGTAATAATGTGAAATGCTAA
Protein sequenceShow/hide protein sequence
MTLRCFPLLFIYLFFFIMSSPATLMATSRNILPLEPTTLTNKALPFIQRSSRHLTTTTTPTSRHSDSLKLSKEKQEQTSTVTHSTLQSCKPKGPVRWSSPSPIRNNVKC