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PI0004603 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004603
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr06:13599387..13600167
RNA-Seq ExpressionPI0004603
SyntenyPI0004603
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]1.3e-5774.25Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG RPSSS N  P PMSA QY MDL FT VTRS++R S I I SPTESSTPPRPS NL+RPSGG+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTR
        PTTYSQAV  +KRF+PRPEIK+YFQK +V+YDPIIEPEYQSLT++E VSKIFP+ FNFLPEDL+K +
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTR

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]1.9e-5674.55Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+R SSS N AP PMSADQYAMDL FT VTRS++R SGI I  PTESSTPPRPSANL+RP G + QM+PPASP SN +SSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRK
        PTTYSQAV P+KRF+PRP+IK YFQK +V+YDP IE EYQSLT++E VSKIFPE FNFLPEDLRK
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRK

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.9e-6578.09Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RP SS N AP P+SADQYAMDL FTTVTR  +RS GI I SPTESSTPPRPS NL+RPS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTK
        PTTYSQAV P+KRF+PRPEIK+YFQK +V+YDPIIE EYQSLT +ETVSKIFPE FNFL EDLRKTRKFYEFIL DTK
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTK

KAA0066421.1 hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa]4.9e-5278.83Show/hide
Query:  MSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYD
        MSADQYAMDL FTTVTRS++RSS IRIES TESSTPPRPSANL+RP GG  QMRPPASP SN ESSTPPTTYSQ V P+KRF+PRPEIK+YFQK +V+YD
Subjt:  MSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYD

Query:  PIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKF
         IIEPEYQS+T+++TVSKIF + FN LPEDLRKTR F
Subjt:  PIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKF

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]3.6e-5575.82Show/hide
Query:  RVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAP
        R +STSS+G+RPSSS N AP PMSADQYAMDL FTTVTRS+ARSS I+I SPT+SSTPPR SANL+RPS  + QMRP ASPLSN ESSTPPTTYSQ + P
Subjt:  RVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAP

Query:  EKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDL
        +KRF+PR EIK+YFQK V++YD IIEPEYQSLT++ETVSKIFP+ FNFLP+DL
Subjt:  EKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDL

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.4e-6578.09Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RP SS N AP P+SADQYAMDL FTTVTR  +RS GI I SPTESSTPPRPS NL+RPS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTK
        PTTYSQAV P+KRF+PRPEIK+YFQK +V+YDPIIE EYQSLT +ETVSKIFPE FNFL EDLRKTRKFYEFIL DTK
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTK

A0A5A7UFZ9 Uncharacterized protein3.3e-4670.97Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N AP PMS DQYAM L FTT+T+SK+RSSGIRI SPTES TPPRP ANL+RPSG + QMR P SPLSN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQ-SLTIDETVSKIFPE
        PTTYSQAV P+KRF+PR EIK+YFQK  V+YDPIIEP YQ S +I E   ++ PE
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQ-SLTIDETVSKIFPE

A0A5D3BM67 Uncharacterized protein2.4e-5278.83Show/hide
Query:  MSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYD
        MSADQYAMDL FTTVTRS++RSS IRIES TESSTPPRPSANL+RP GG  QMRPPASP SN ESSTPPTTYSQ V P+KRF+PRPEIK+YFQK +V+YD
Subjt:  MSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYD

Query:  PIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKF
         IIEPEYQS+T+++TVSKIF + FN LPEDLRKTR F
Subjt:  PIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKF

A0A5D3E4J4 Uncharacterized protein9.3e-5774.55Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+R SSS N AP PMSADQYAMDL FT VTRS++R SGI I  PTESSTPPRPSANL+RP G + QM+PPASP SN +SSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRK
        PTTYSQAV P+KRF+PRP+IK YFQK +V+YDP IE EYQSLT++E VSKIFPE FNFLPEDLRK
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRK

E5GCE6 Uncharacterized protein6.4e-5874.25Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG RPSSS N  P PMSA QY MDL FT VTRS++R S I I SPTESSTPPRPS NL+RPSGG+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTR
        PTTYSQAV  +KRF+PRPEIK+YFQK +V+YDPIIEPEYQSLT++E VSKIFP+ FNFLPEDL+K +
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTTACCTATGAGTGCAGATCAATATGC
AATGGATTTGAGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAAAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGATTACATCAAAGCTTGGTTTAG
AGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCCTACAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTTACCTATGAGTGCAGATCAATATGC
AATGGATTTGAGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAAAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGATTACATCAAAGCTTGGTTTAG
AGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCCTACAAGATAA
Protein sequenceShow/hide protein sequence
MSSVRGRGRVSSTSSKGSRPSSSQNPAPLPMSADQYAMDLRFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEK
RFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKITSKLGLELFGILAETIHGLFLSARTPTR