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PI0004614 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004614
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:4884589..4885059
RNA-Seq ExpressionPI0004614
SyntenyPI0004614
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-4064.34Show/hide
Query:  MCEPSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNM
        MC P+C+ FGWNDE KCI+AEK+VF+NWVKSHP  KGLLNKSFP+YD+LSYVFGKDRATG   E+F D+G N    YE F      D     MYSQGLNM
Subjt:  MCEPSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNM

Query:  SPDDIMGIQPGRSSEGKNASSGSKRKRGG
        SPD++MGI+  + SEG+  SSGSKRKR G
Subjt:  SPDDIMGIQPGRSSEGKNASSGSKRKRGG

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-3963.49Show/hide
Query:  PSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNMSPD
        P+C+GFGWNDE KCI+AEK+VF++WV+SHPA KGLLNKSFP+YD+LSYVF KD ATG   E+F DVGSN    Y+ F A   +D     MYS+GLNMSPD
Subjt:  PSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNMSPD

Query:  DIMGIQPGRSSEGKNASSGSKRKRGG
        ++MG +  R SEG+  SSGSK+KRGG
Subjt:  DIMGIQPGRSSEGKNASSGSKRKRGG

KAA0063726.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-4065.12Show/hide
Query:  MCEPSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNM
        MC P C+GFGWNDE KCI+AEK+VF++WVKSHPA KGLLNKSF +YD+LSYVFGKDRATG  +E+F +V SN    Y+ F      D   P MYSQGLNM
Subjt:  MCEPSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNM

Query:  SPDDIMGIQPGRSSEGKNASSGSKRKRGG
        SPDD+MG +  R SE +N SSGSKRKR G
Subjt:  SPDDIMGIQPGRSSEGKNASSGSKRKRGG

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]3.8e-4266.67Show/hide
Query:  PSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRY-EGFPAGNENDPKIPMMYSQGLNMSP
        PSC+GFGWN+EF+CIIAE+D+F++W+KSHPA KGLL+KSFPYYDDLSYVFGKDRATGA  ETF +VGSNV   + +  P G+ +D  IP MYSQG++MSP
Subjt:  PSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRY-EGFPAGNENDPKIPMMYSQGLNMSP

Query:  DDIMGIQPGRSSEGKNASSGSKRKRG
        D++ GI+ G++SE +N SS SKRKRG
Subjt:  DDIMGIQPGRSSEGKNASSGSKRKRG

XP_031739703.1 uncharacterized protein LOC116403241 [Cucumis sativus]1.7e-3964.34Show/hide
Query:  MCEPSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNM
        MC PSC+GFGWND+ KCI+AEK++F+NWV+SHPAT GLLNK F YYD+L+Y+FGKDRATGA  ETF DVGSNV    E FP  + ND KIP M S   NM
Subjt:  MCEPSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNM

Query:  SPDDIMGIQPGRSSEGKNASSGSKRKRGG
        S DDI   +PGR ++ +  SSGSKR+RGG
Subjt:  SPDDIMGIQPGRSSEGKNASSGSKRKRGG

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859531.8e-4266.67Show/hide
Query:  PSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRY-EGFPAGNENDPKIPMMYSQGLNMSP
        PSC+GFGWN+EF+CIIAE+D+F++W+KSHPA KGLL+KSFPYYDDLSYVFGKDRATGA  ETF +VGSNV   + +  P G+ +D  IP MYSQG++MSP
Subjt:  PSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRY-EGFPAGNENDPKIPMMYSQGLNMSP

Query:  DDIMGIQPGRSSEGKNASSGSKRKRG
        D++ GI+ G++SE +N SS SKRKRG
Subjt:  DDIMGIQPGRSSEGKNASSGSKRKRG

A0A5A7SXX8 Retrotransposon protein1.7e-4064.34Show/hide
Query:  MCEPSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNM
        MC P+C+ FGWNDE KCI+AEK+VF+NWVKSHP  KGLLNKSFP+YD+LSYVFGKDRATG   E+F D+G N    YE F      D     MYSQGLNM
Subjt:  MCEPSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNM

Query:  SPDDIMGIQPGRSSEGKNASSGSKRKRGG
        SPD++MGI+  + SEG+  SSGSKRKR G
Subjt:  SPDDIMGIQPGRSSEGKNASSGSKRKRGG

A0A5A7TZA5 Retrotransposon protein8.5e-4063.49Show/hide
Query:  PSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNMSPD
        P+C+GFGWNDE KCI+AEK+VF++WV+SHPA KGLLNKSFP+YD+LSYVF KD ATG   E+F DVGSN    Y+ F A   +D     MYS+GLNMSPD
Subjt:  PSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNMSPD

Query:  DIMGIQPGRSSEGKNASSGSKRKRGG
        ++MG +  R SEG+  SSGSK+KRGG
Subjt:  DIMGIQPGRSSEGKNASSGSKRKRGG

A0A5A7U0H7 Retrotransposon protein1.8e-4266.67Show/hide
Query:  PSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRY-EGFPAGNENDPKIPMMYSQGLNMSP
        PSC+GFGWN+EF+CIIAE+D+F++W+KSHPA KGLL+KSFPYYDDLSYVFGKDRATGA  ETF +VGSNV   + +  P G+ +D  IP MYSQG++MSP
Subjt:  PSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRY-EGFPAGNENDPKIPMMYSQGLNMSP

Query:  DDIMGIQPGRSSEGKNASSGSKRKRG
        D++ GI+ G++SE +N SS SKRKRG
Subjt:  DDIMGIQPGRSSEGKNASSGSKRKRG

A0A5A7VBC5 Retrotransposon protein1.0e-4065.12Show/hide
Query:  MCEPSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNM
        MC P C+GFGWNDE KCI+AEK+VF++WVKSHPA KGLLNKSF +YD+LSYVFGKDRATG  +E+F +V SN    Y+ F      D   P MYSQGLNM
Subjt:  MCEPSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNM

Query:  SPDDIMGIQPGRSSEGKNASSGSKRKRGG
        SPDD+MG +  R SE +N SSGSKRKR G
Subjt:  SPDDIMGIQPGRSSEGKNASSGSKRKRGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.2 unknown protein2.5e-0733.33Show/hide
Query:  NGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATG
        NGF W+     +IA+ D++N ++++HP  +    K+ P Y +L ++FGK+ + G
Subjt:  NGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATG

AT4G02210.1 unknown protein3.3e-0434.04Show/hide
Query:  NGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVF
        +GF W+D  + ++A+  V++ ++K HP ++    KS P Y DL  V+
Subjt:  NGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVF

AT4G02210.2 unknown protein3.3e-0434.04Show/hide
Query:  NGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVF
        +GF W+D  + ++A+  V++ ++K HP ++    KS P Y DL  V+
Subjt:  NGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVF

AT5G27260.1 unknown protein1.6e-0637.04Show/hide
Query:  NGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATG
        +GFGW+   K   A  +V+++++K+HP  K L   +F ++D+L  +FG+  ATG
Subjt:  NGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGAGCCATCGTGCAATGGGTTTGGTTGGAACGATGAATTCAAGTGCATCATCGCTGAGAAGGACGTTTTCAACAATTGGGTGAAGAGTCATCCTGCCACCAAGGG
CCTCCTAAATAAATCATTTCCCTATTACGATGACTTGTCCTACGTTTTTGGAAAAGATCGTGCTACGGGAGCACTCTTAGAGACATTCGTCGATGTGGGGTCAAATGTGC
TAAGAAGGTATGAGGGATTTCCAGCTGGCAATGAGAATGATCCAAAGATCCCTATGATGTATAGTCAAGGACTAAACATGTCGCCTGACGATATCATGGGCATACAACCC
GGTCGCTCAAGTGAGGGTAAGAATGCATCAAGCGGAAGCAAGAGGAAGCGAGGAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTGAGCCATCGTGCAATGGGTTTGGTTGGAACGATGAATTCAAGTGCATCATCGCTGAGAAGGACGTTTTCAACAATTGGGTGAAGAGTCATCCTGCCACCAAGGG
CCTCCTAAATAAATCATTTCCCTATTACGATGACTTGTCCTACGTTTTTGGAAAAGATCGTGCTACGGGAGCACTCTTAGAGACATTCGTCGATGTGGGGTCAAATGTGC
TAAGAAGGTATGAGGGATTTCCAGCTGGCAATGAGAATGATCCAAAGATCCCTATGATGTATAGTCAAGGACTAAACATGTCGCCTGACGATATCATGGGCATACAACCC
GGTCGCTCAAGTGAGGGTAAGAATGCATCAAGCGGAAGCAAGAGGAAGCGAGGAGGCTAG
Protein sequenceShow/hide protein sequence
MCEPSCNGFGWNDEFKCIIAEKDVFNNWVKSHPATKGLLNKSFPYYDDLSYVFGKDRATGALLETFVDVGSNVLRRYEGFPAGNENDPKIPMMYSQGLNMSPDDIMGIQP
GRSSEGKNASSGSKRKRGG