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PI0004616 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004616
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr04:25481488..25481868
RNA-Seq ExpressionPI0004616
SyntenyPI0004616
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.2e-2465.31Show/hide
Query:  KLAFVPLLGLL-GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDNWRASRNVIKVSAMLES
        K+ + P + L+ G IAYSPLLVL          +V GLED EFSYES++AN+KIHEAV+AWKFVKKMKS+RHCE TTEQYDNWRASRN I ++AM ES
Subjt:  KLAFVPLLGLL-GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDNWRASRNVIKVSAMLES

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]2.1e-2370.93Show/hide
Query:  GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDNWRASRNVIKVSAMLES
        G IAYSPLLVL          +V GLED EFSYES++ANDKIHEAV+AWKFVKKMKS+RHCE TTEQYDNWRASRN I ++ M ES
Subjt:  GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDNWRASRNVIKVSAMLES

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]2.1e-1538.21Show/hide
Query:  MHFFSHLTKGEVVWRAPWVPTSPLTYRCGKLAFVPLLGLLGDIAYSPLLVLL----------VYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRH
        + FF+ LT   V+W+A W+P   + YRCG    VPLLG  G + Y+PLLVL            + L++ +FSY+ +    K  +AV AWK ++K+K   H
Subjt:  MHFFSHLTKGEVVWRAPWVPTSPLTYRCGKLAFVPLLGLLGDIAYSPLLVLL----------VYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRH

Query:  CESTTEQYDNWRASR--NVIKVS
         E  T  Y+ W+A+R  N+I +S
Subjt:  CESTTEQYDNWRASR--NVIKVS

KGN51408.1 hypothetical protein Csa_007736 [Cucumis sativus]6.8e-2757.55Show/hide
Query:  EVVWRAPWVPTSPLTYRCGKLAFVPLLGLLGDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDN
        E+VWR+ WVP SPLTYRCG+L F+ LLGL G IAYSPLLVL          ++YGLED +FSYE+D    K+ E ++ WK V+++KS+RHC+ TT QYD 
Subjt:  EVVWRAPWVPTSPLTYRCGKLAFVPLLGLLGDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDN

Query:  WRASRN
        WRA RN
Subjt:  WRASRN

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]9.2e-4069.29Show/hide
Query:  MHFFSHLTKGEVVWRAPWVPTSPLTYRCGKLAFVPLLGLL-GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMR
        M FFSHLT  + +WRAPW+ TSPLT+RCGKLA + LLGL  G IAYSPLLVL          +V GLED EFSYES++AN+KIHEAV+AWKFVKKMKS+R
Subjt:  MHFFSHLTKGEVVWRAPWVPTSPLTYRCGKLAFVPLLGLL-GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMR

Query:  HCESTTEQYDNWRASRNVIKVSAMLES
        HCE TTEQYDNWRASRN I ++AM ES
Subjt:  HCESTTEQYDNWRASRNVIKVSAMLES

TrEMBL top hitse value%identityAlignment
A0A0A0KP72 Uncharacterized protein3.3e-2757.55Show/hide
Query:  EVVWRAPWVPTSPLTYRCGKLAFVPLLGLLGDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDN
        E+VWR+ WVP SPLTYRCG+L F+ LLGL G IAYSPLLVL          ++YGLED +FSYE+D    K+ E ++ WK V+++KS+RHC+ TT QYD 
Subjt:  EVVWRAPWVPTSPLTYRCGKLAFVPLLGLLGDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDN

Query:  WRASRN
        WRA RN
Subjt:  WRASRN

A0A5A7SNY0 Glial fibrillary acidic protein-like1.5e-2465.31Show/hide
Query:  KLAFVPLLGLL-GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDNWRASRNVIKVSAMLES
        K+ + P + L+ G IAYSPLLVL          +V GLED EFSYES++AN+KIHEAV+AWKFVKKMKS+RHCE TTEQYDNWRASRN I ++AM ES
Subjt:  KLAFVPLLGLL-GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDNWRASRNVIKVSAMLES

A0A5A7SUT0 Reverse transcriptase1.0e-2370.93Show/hide
Query:  GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDNWRASRNVIKVSAMLES
        G IAYSPLLVL          +V GLED EFSYES++ANDKIHEAV+AWKFVKKMKS+RHCE TTEQYDNWRASRN I ++ M ES
Subjt:  GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDNWRASRNVIKVSAMLES

A0A5A7T5S7 Girdin-like1.0e-1538.21Show/hide
Query:  MHFFSHLTKGEVVWRAPWVPTSPLTYRCGKLAFVPLLGLLGDIAYSPLLVLL----------VYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRH
        + FF+ LT   V+W+A W+P   + YRCG    VPLLG  G + Y+PLLVL            + L++ +FSY+ +    K  +AV AWK ++K+K   H
Subjt:  MHFFSHLTKGEVVWRAPWVPTSPLTYRCGKLAFVPLLGLLGDIAYSPLLVLL----------VYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRH

Query:  CESTTEQYDNWRASR--NVIKVS
         E  T  Y+ W+A+R  N+I +S
Subjt:  CESTTEQYDNWRASR--NVIKVS

A0A5D3D0S2 Glial fibrillary acidic protein-like4.5e-4069.29Show/hide
Query:  MHFFSHLTKGEVVWRAPWVPTSPLTYRCGKLAFVPLLGLL-GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMR
        M FFSHLT  + +WRAPW+ TSPLT+RCGKLA + LLGL  G IAYSPLLVL          +V GLED EFSYES++AN+KIHEAV+AWKFVKKMKS+R
Subjt:  MHFFSHLTKGEVVWRAPWVPTSPLTYRCGKLAFVPLLGLL-GDIAYSPLLVL----------LVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMR

Query:  HCESTTEQYDNWRASRNVIKVSAMLES
        HCE TTEQYDNWRASRN I ++AM ES
Subjt:  HCESTTEQYDNWRASRNVIKVSAMLES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTTTTCAGCCATTTAACGAAAGGAGAAGTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCCCTTGACATACCGTTGTGGGAAATTGGCTTTTGTCCCATTATT
GGGCCTATTGGGAGACATTGCTTACTCTCCTCTTTTGGTACTACTTGTATATGGGCTAGAGGATTTGGAATTCTCATATGAGTCAGACGTGGCAAATGATAAAATTCATG
AAGCAGTTGACGCATGGAAATTCGTAAAGAAAATGAAGAGCATGCGACATTGTGAGAGTACTACAGAACAATATGATAATTGGAGAGCATCTAGGAATGTGATTAAAGTT
AGTGCTATGTTAGAATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTTTTTCAGCCATTTAACGAAAGGAGAAGTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCCCTTGACATACCGTTGTGGGAAATTGGCTTTTGTCCCATTATT
GGGCCTATTGGGAGACATTGCTTACTCTCCTCTTTTGGTACTACTTGTATATGGGCTAGAGGATTTGGAATTCTCATATGAGTCAGACGTGGCAAATGATAAAATTCATG
AAGCAGTTGACGCATGGAAATTCGTAAAGAAAATGAAGAGCATGCGACATTGTGAGAGTACTACAGAACAATATGATAATTGGAGAGCATCTAGGAATGTGATTAAAGTT
AGTGCTATGTTAGAATCTTAG
Protein sequenceShow/hide protein sequence
MHFFSHLTKGEVVWRAPWVPTSPLTYRCGKLAFVPLLGLLGDIAYSPLLVLLVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDNWRASRNVIKV
SAMLES