; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004617 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004617
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr05:8697450..8698549
RNA-Seq ExpressionPI0004617
SyntenyPI0004617
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062320.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]1.0e-7053.05Show/hide
Query:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS
        ++WASLFG++   +LP T P ++G KIVV+P+ EVI QG+ + ENSLVGQL+DA LP+S++QRL+EKI GKIE+P I ILEN LICFQFR  KS+EWILS
Subjt:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS

Query:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF
        RGPWHLGGKPM  RKW P IVP++FVFNS+PVWI LG++P+ELWTE+ + V+A  +                         EGG+++PSE+TVN+R VEF
Subjt:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF

Query:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD
         V V YEWKP  CN   +FGHS+ KC + E  +  +E  V +     G +  +  CGEVVL+
Subjt:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]4.4e-6646.92Show/hide
Query:  SKGAIRNLKLPKEDNVFIKGVG-VVAENTNSWASLFGSSLRKALPCTPPSSVGSKIVVV-PSEVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGK
        S G + N +     NV   G+   + ++ ++WASLFG+S  ++L  T P  +G KIVV  P EVI QG+ + ENSLVGQL+D+ LP++++Q L+EKIWGK
Subjt:  SKGAIRNLKLPKEDNVFIKGVG-VVAENTNSWASLFGSSLRKALPCTPPSSVGSKIVVV-PSEVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGK

Query:  IEIPTIMILENGLICFQFRCPKSIEWILSRGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI---------------
        IE+P I ILEN LICFQFR  KS+EWILSRGPWHL  K M LRKW P IVP+ FVFNS+PVWI+LG++P+ELWTE+ + V+AS +               
Subjt:  IEIPTIMILENGLICFQFRCPKSIEWILSRGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI---------------

Query:  ----------EGGADLPSEVTVNMRAVEFIVPVTYEWKPCMCNSYHSFGHSAGKCPQK-ETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD
                  E G+++P+E+TV++R V+F V V YEWKP  CN   +FGHS   C +  E+  +Q+E          G +  +  CGEVVL+
Subjt:  ----------EGGADLPSEVTVNMRAVEFIVPVTYEWKPCMCNSYHSFGHSAGKCPQK-ETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD

TYK26656.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]6.0e-7153.05Show/hide
Query:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS
        ++WASLFG++   +LP T P ++G KIVV+P+ EVI QG+ + ENSLVGQL+DA LP+S++QRL+EKI GKIE+P I ILEN LICFQFR  KS+EWILS
Subjt:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS

Query:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF
        RGPWHLGGKPM  RKW P+IVP++FVFNS+PVWI LG++P+ELWTE+ + V+A  +                         EGG+++PSE+TVN+R VEF
Subjt:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF

Query:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD
         V V YEWKP  CN   +FGHS+ KC + E  +  +E  V +     G +  +  CGEVVL+
Subjt:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD

XP_008460524.1 PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo]1.0e-7053.05Show/hide
Query:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS
        ++WASLFG++   +LP T P ++G KIVV+P+ EVI QG+ + ENSLVGQL+DA LP+S++QRL+EKI GKIE+P I ILEN LICFQFR  KS+EWILS
Subjt:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS

Query:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF
        RGPWHLGGKPM  RKW P IVP++FVFNS+PVWI LG++P+ELWTE+ + V+A  +                         EGG+++PSE+TVN+R VEF
Subjt:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF

Query:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD
         V V YEWKP  CN   +FGHS+ KC + E  +  +E  V +     G +  +  CGEVVL+
Subjt:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD

XP_008463187.1 PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]4.4e-6646.92Show/hide
Query:  SKGAIRNLKLPKEDNVFIKGVG-VVAENTNSWASLFGSSLRKALPCTPPSSVGSKIVVV-PSEVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGK
        S G + N +     NV   G+   + ++ ++WASLFG+S  ++L  T P  +G KIVV  P EVI QG+ + ENSLVGQL+D+ LP++++Q L+EKIWGK
Subjt:  SKGAIRNLKLPKEDNVFIKGVG-VVAENTNSWASLFGSSLRKALPCTPPSSVGSKIVVV-PSEVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGK

Query:  IEIPTIMILENGLICFQFRCPKSIEWILSRGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI---------------
        IE+P I ILEN LICFQFR  KS+EWILSRGPWHL  K M LRKW P IVP+ FVFNS+PVWI+LG++P+ELWTE+ + V+AS +               
Subjt:  IEIPTIMILENGLICFQFRCPKSIEWILSRGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI---------------

Query:  ----------EGGADLPSEVTVNMRAVEFIVPVTYEWKPCMCNSYHSFGHSAGKCPQK-ETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD
                  E G+++P+E+TV++R V+F V V YEWKP  CN   +FGHS   C +  E+  +Q+E          G +  +  CGEVVL+
Subjt:  ----------EGGADLPSEVTVNMRAVEFIVPVTYEWKPCMCNSYHSFGHSAGKCPQK-ETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD

TrEMBL top hitse value%identityAlignment
A0A1S3CC83 uncharacterized protein LOC1034993234.9e-7153.05Show/hide
Query:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS
        ++WASLFG++   +LP T P ++G KIVV+P+ EVI QG+ + ENSLVGQL+DA LP+S++QRL+EKI GKIE+P I ILEN LICFQFR  KS+EWILS
Subjt:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS

Query:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF
        RGPWHLGGKPM  RKW P IVP++FVFNS+PVWI LG++P+ELWTE+ + V+A  +                         EGG+++PSE+TVN+R VEF
Subjt:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF

Query:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD
         V V YEWKP  CN   +FGHS+ KC + E  +  +E  V +     G +  +  CGEVVL+
Subjt:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD

A0A1S3CJ11 uncharacterized protein LOC1035013952.1e-6646.92Show/hide
Query:  SKGAIRNLKLPKEDNVFIKGVG-VVAENTNSWASLFGSSLRKALPCTPPSSVGSKIVVV-PSEVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGK
        S G + N +     NV   G+   + ++ ++WASLFG+S  ++L  T P  +G KIVV  P EVI QG+ + ENSLVGQL+D+ LP++++Q L+EKIWGK
Subjt:  SKGAIRNLKLPKEDNVFIKGVG-VVAENTNSWASLFGSSLRKALPCTPPSSVGSKIVVV-PSEVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGK

Query:  IEIPTIMILENGLICFQFRCPKSIEWILSRGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI---------------
        IE+P I ILEN LICFQFR  KS+EWILSRGPWHL  K M LRKW P IVP+ FVFNS+PVWI+LG++P+ELWTE+ + V+AS +               
Subjt:  IEIPTIMILENGLICFQFRCPKSIEWILSRGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI---------------

Query:  ----------EGGADLPSEVTVNMRAVEFIVPVTYEWKPCMCNSYHSFGHSAGKCPQK-ETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD
                  E G+++P+E+TV++R V+F V V YEWKP  CN   +FGHS   C +  E+  +Q+E          G +  +  CGEVVL+
Subjt:  ----------EGGADLPSEVTVNMRAVEFIVPVTYEWKPCMCNSYHSFGHSAGKCPQK-ETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD

A0A5A7V507 DUF4283 domain-containing protein4.9e-7153.05Show/hide
Query:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS
        ++WASLFG++   +LP T P ++G KIVV+P+ EVI QG+ + ENSLVGQL+DA LP+S++QRL+EKI GKIE+P I ILEN LICFQFR  KS+EWILS
Subjt:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS

Query:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF
        RGPWHLGGKPM  RKW P IVP++FVFNS+PVWI LG++P+ELWTE+ + V+A  +                         EGG+++PSE+TVN+R VEF
Subjt:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF

Query:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD
         V V YEWKP  CN   +FGHS+ KC + E  +  +E  V +     G +  +  CGEVVL+
Subjt:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD

A0A5D3D5X6 Reverse transcriptase domain-containing protein2.1e-6646.92Show/hide
Query:  SKGAIRNLKLPKEDNVFIKGVG-VVAENTNSWASLFGSSLRKALPCTPPSSVGSKIVVV-PSEVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGK
        S G + N +     NV   G+   + ++ ++WASLFG+S  ++L  T P  +G KIVV  P EVI QG+ + ENSLVGQL+D+ LP++++Q L+EKIWGK
Subjt:  SKGAIRNLKLPKEDNVFIKGVG-VVAENTNSWASLFGSSLRKALPCTPPSSVGSKIVVV-PSEVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGK

Query:  IEIPTIMILENGLICFQFRCPKSIEWILSRGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI---------------
        IE+P I ILEN LICFQFR  KS+EWILSRGPWHL  K M LRKW P IVP+ FVFNS+PVWI+LG++P+ELWTE+ + V+AS +               
Subjt:  IEIPTIMILENGLICFQFRCPKSIEWILSRGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI---------------

Query:  ----------EGGADLPSEVTVNMRAVEFIVPVTYEWKPCMCNSYHSFGHSAGKCPQK-ETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD
                  E G+++P+E+TV++R V+F V V YEWKP  CN   +FGHS   C +  E+  +Q+E          G +  +  CGEVVL+
Subjt:  ----------EGGADLPSEVTVNMRAVEFIVPVTYEWKPCMCNSYHSFGHSAGKCPQK-ETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD

A0A5D3DSG9 DUF4283 domain-containing protein2.9e-7153.05Show/hide
Query:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS
        ++WASLFG++   +LP T P ++G KIVV+P+ EVI QG+ + ENSLVGQL+DA LP+S++QRL+EKI GKIE+P I ILEN LICFQFR  KS+EWILS
Subjt:  NSWASLFGSSLRKALPCTPPSSVGSKIVVVPS-EVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILS

Query:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF
        RGPWHLGGKPM  RKW P+IVP++FVFNS+PVWI LG++P+ELWTE+ + V+A  +                         EGG+++PSE+TVN+R VEF
Subjt:  RGPWHLGGKPMPLRKWVPSIVPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVI-------------------------EGGADLPSEVTVNMRAVEF

Query:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD
         V V YEWKP  CN   +FGHS+ KC + E  +  +E  V +     G +  +  CGEVVL+
Subjt:  IVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVTCGEVVLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCAGGTAGATGGAGAGGATTCTACAGATGGGCTAACGGGGTCGTCAGATAGTGGGAAGCTGGTCCATTTTGAAAGCAAAGTTGGGAGGGCTTCATCTAGGCTTCA
TTGTGGTCCAAATGATGTTAGTTTGGGTCAAATTAAGAATACGGTGGATGGGCTTTCTACAGAATTGAAGGGTCTTGCTTCAGGTATTACAAAGTCAGTTGGGTTGGAGT
CGAAAGGAGCCATAAGAAATTTGAAGTTGCCTAAGGAAGATAATGTTTTTATCAAAGGAGTTGGAGTCGTTGCAGAGAATACAAATTCTTGGGCTTCTCTATTTGGTTCT
TCATTGAGAAAAGCTCTTCCTTGTACTCCTCCCTCATCGGTTGGGTCGAAAATTGTGGTTGTTCCATCTGAGGTTATTGCTCAAGGTGTTAGTATGCGGGAAAATTCGTT
AGTGGGCCAACTTGTGGATGCTTCGTTACCTTTTTCCATTGTTCAACGGCTTATTGAGAAAATATGGGGGAAAATCGAAATACCAACCATTATGATTCTTGAGAATGGGC
TTATTTGCTTTCAATTTCGATGTCCCAAATCGATAGAGTGGATTCTATCTCGTGGGCCGTGGCATCTTGGTGGGAAACCCATGCCCCTCCGCAAATGGGTTCCAAGTATT
GTCCCTAAAACCTTTGTCTTTAATTCTATTCCTGTGTGGATCAAACTGGGTCGTATCCCCATAGAGTTGTGGACTGAGTCAAGTATTGTAGTCATTGCTAGTGTTATTGA
GGGGGGTGCTGATTTGCCTTCTGAGGTCACAGTAAATATGAGGGCTGTGGAGTTTATTGTACCAGTTACCTATGAGTGGAAACCCTGTATGTGTAATTCCTATCATTCGT
TTGGTCATTCAGCTGGTAAGTGCCCTCAGAAGGAGACGCCTCAGGTGCAAAAGGAGGCGGATGTGAGCGAGGTAGCTCCTAGTACGGGTGCTGAGCAGGCTACTGTTACT
TGTGGGGAAGTGGTGTTAGATCCTTTAAGCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCAGGTAGATGGAGAGGATTCTACAGATGGGCTAACGGGGTCGTCAGATAGTGGGAAGCTGGTCCATTTTGAAAGCAAAGTTGGGAGGGCTTCATCTAGGCTTCA
TTGTGGTCCAAATGATGTTAGTTTGGGTCAAATTAAGAATACGGTGGATGGGCTTTCTACAGAATTGAAGGGTCTTGCTTCAGGTATTACAAAGTCAGTTGGGTTGGAGT
CGAAAGGAGCCATAAGAAATTTGAAGTTGCCTAAGGAAGATAATGTTTTTATCAAAGGAGTTGGAGTCGTTGCAGAGAATACAAATTCTTGGGCTTCTCTATTTGGTTCT
TCATTGAGAAAAGCTCTTCCTTGTACTCCTCCCTCATCGGTTGGGTCGAAAATTGTGGTTGTTCCATCTGAGGTTATTGCTCAAGGTGTTAGTATGCGGGAAAATTCGTT
AGTGGGCCAACTTGTGGATGCTTCGTTACCTTTTTCCATTGTTCAACGGCTTATTGAGAAAATATGGGGGAAAATCGAAATACCAACCATTATGATTCTTGAGAATGGGC
TTATTTGCTTTCAATTTCGATGTCCCAAATCGATAGAGTGGATTCTATCTCGTGGGCCGTGGCATCTTGGTGGGAAACCCATGCCCCTCCGCAAATGGGTTCCAAGTATT
GTCCCTAAAACCTTTGTCTTTAATTCTATTCCTGTGTGGATCAAACTGGGTCGTATCCCCATAGAGTTGTGGACTGAGTCAAGTATTGTAGTCATTGCTAGTGTTATTGA
GGGGGGTGCTGATTTGCCTTCTGAGGTCACAGTAAATATGAGGGCTGTGGAGTTTATTGTACCAGTTACCTATGAGTGGAAACCCTGTATGTGTAATTCCTATCATTCGT
TTGGTCATTCAGCTGGTAAGTGCCCTCAGAAGGAGACGCCTCAGGTGCAAAAGGAGGCGGATGTGAGCGAGGTAGCTCCTAGTACGGGTGCTGAGCAGGCTACTGTTACT
TGTGGGGAAGTGGTGTTAGATCCTTTAAGCAGTTAG
Protein sequenceShow/hide protein sequence
MGQVDGEDSTDGLTGSSDSGKLVHFESKVGRASSRLHCGPNDVSLGQIKNTVDGLSTELKGLASGITKSVGLESKGAIRNLKLPKEDNVFIKGVGVVAENTNSWASLFGS
SLRKALPCTPPSSVGSKIVVVPSEVIAQGVSMRENSLVGQLVDASLPFSIVQRLIEKIWGKIEIPTIMILENGLICFQFRCPKSIEWILSRGPWHLGGKPMPLRKWVPSI
VPKTFVFNSIPVWIKLGRIPIELWTESSIVVIASVIEGGADLPSEVTVNMRAVEFIVPVTYEWKPCMCNSYHSFGHSAGKCPQKETPQVQKEADVSEVAPSTGAEQATVT
CGEVVLDPLSS