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PI0004618 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004618
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA ligase
Genome locationchr04:985922..988974
RNA-Seq ExpressionPI0004618
SyntenyPI0004618
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581445.1 hypothetical protein SDJN03_21447, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3891.92Show/hide
Query:  MADESQQHQSESQ-PPLEVDSAPP--PPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
        MADESQQ QSESQ PPLEVDSAPP  PPP FDPSRMIGII+RKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKET KPSKRQ+KSR
Subjt:  MADESQQHQSESQ-PPLEVDSAPP--PPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
KAG7034738.1 hypothetical protein SDJN02_04468, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3891.92Show/hide
Query:  MADESQQHQSESQ-PPLEVDSAPP--PPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
        MADESQQ QSESQ PPLEVDSAPP  PPP FDPSRMIGII+RKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKET+KPSKRQ+KSR
Subjt:  MADESQQHQSESQ-PPLEVDSAPP--PPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
XP_004134646.1 uncharacterized protein LOC101211064 [Cucumis sativus]7.6e-4091.84Show/hide
Query:  MADESQQHQSESQPPLEVDSA--PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
        MADESQQ QSE+QPPL++DS   PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKET KPSKRQKKSR
Subjt:  MADESQQHQSESQPPLEVDSA--PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
XP_008439608.1 PREDICTED: uncharacterized protein LOC103484351 [Cucumis melo]9.0e-4193Show/hide
Query:  MADESQQHQSESQPPLEVDSA----PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
        MADESQQ QSESQPPLEVDS     PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKET+KPSKRQKKSR
Subjt:  MADESQQHQSESQPPLEVDSA----PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
XP_038881750.1 uncharacterized protein LOC120073165 isoform X1 [Benincasa hispida]2.9e-3991.84Show/hide
Query:  MADESQQHQSESQPPLEVDSAPP--PPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
        MADE QQ QSESQPPLEVDSAPP  PPP FDPSRMIGII+RKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAP+DPRKET+KPSKRQKKSR
Subjt:  MADESQQHQSESQPPLEVDSAPP--PPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
TrEMBL top hitse value%identityAlignment
A0A0A0KM14 Uncharacterized protein3.7e-4091.84Show/hide
Query:  MADESQQHQSESQPPLEVDSA--PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
        MADESQQ QSE+QPPL++DS   PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKET KPSKRQKKSR
Subjt:  MADESQQHQSESQPPLEVDSA--PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
A0A1S3AZS8 uncharacterized protein LOC1034843514.4e-4193Show/hide
Query:  MADESQQHQSESQPPLEVDSA----PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
        MADESQQ QSESQPPLEVDS     PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKET+KPSKRQKKSR
Subjt:  MADESQQHQSESQPPLEVDSA----PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
A0A5D3CQ43 Uncharacterized protein4.4e-4193Show/hide
Query:  MADESQQHQSESQPPLEVDSA----PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
        MADESQQ QSESQPPLEVDS     PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKET+KPSKRQKKSR
Subjt:  MADESQQHQSESQPPLEVDSA----PPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
A0A6J1EGC9 uncharacterized protein LOC1114338471.7e-3279Show/hide
Query:  MADESQQHQSESQPPLEVD-SAP---PPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
        MAD+    +S+S+PPLE D SAP   PPPP FDPSRMIGII+RKAL+KELAAAYHAECL+YCQELLELQRKWDEPYIELK P+DPRKET+KPSKRQKK+R
Subjt:  MADESQQHQSESQPPLEVD-SAP---PPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
A0A6J1KMP8 uncharacterized protein LOC1114970891.3e-3279Show/hide
Query:  MADESQQHQSESQPPLEVD-SAP---PPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
        MAD+    +S+SQPPL+ D SAP   PPPP FDPSRMIGII+RKAL+KELAAAYHAECL+YCQELLELQRKWDEPYIELK P+DPRKET+KPSKRQKK+R
Subjt:  MADESQQHQSESQPPLEVD-SAP---PPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18400.1 unknown protein2.2e-2161.8Show/hide
Query:  QSESQPPLEVDSAPPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLK-PSKRQKKSR
        +S SQP         PP  FDPSRMIGII+RKALIK+LAAAYH ECL  C+ELLELQ++ DEP+++ KA +D RKETL+  SKR KK R
Subjt:  QSESQPPLEVDSAPPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLK-PSKRQKKSR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACGAATCGCAACAACACCAATCTGAATCTCAACCTCCACTCGAAGTCGATTCGGCGCCTCCGCCACCGCCTCGCTTTGATCCCAGTCGAATGATTGGTATCAT
TAGAAGGAAGGCATTGATAAAAGAACTAGCTGCTGCATATCACGCCGAGTGTCTTGTATACTGCCAAGAGCTTCTTGAGCTCCAAAGAAAGTGGGACGAGCCATATATTG
AGTTAAAAGCACCTGATGATCCAAGAAAAGAGACACTGAAGCCTAGCAAACGTCAAAAGAAATCCCGCTAG
mRNA sequenceShow/hide mRNA sequence
TTTCGATTATTTGTTGCACTCCTAATTAAAAAGTGTTTGTTAACCTAAGCAACCTTTTCTTGAGAGAAGATAAATAATTAAACATATATATGAAAATAAAAAAGCATATC
TAGAAAGAAGAATGTGCAGTAGATGAAGGAGAAAGAGAGATTCAAAGATGGCAGCTTTGTGTGATTTCTTATCTGGAAGTGGAAAAAGGAGTATTTTTGGGGACACCGAT
CACACTGCTGAAGCAAATAAATAGGTGAAGAAGCGATGCCATTGCCATTGACAGCCCAATTCACTTCTCTCTTCCGACGCACGGTAACGAACAAGAACCCTAATTCCAAT
TCCGGGAGACGACGACGACGACGACTCTGTCTCTCTCATTTGGGCAATCCCAAATATGAGTCATAATATGAAGACCCACTTCATAGATTGAGCTTTTTTCATGTCCTCTG
CCATCTTTCTCGCGATTCCCTTTCCTTTCTATTGAGACATATCCATGGCTGACGAATCGCAACAACACCAATCTGAATCTCAACCTCCACTCGAAGTCGATTCGGCGCCT
CCGCCACCGCCTCGCTTTGATCCCAGTCGAATGATTGGTATCATTAGAAGGAAGGCATTGATAAAAGAACTAGCTGCTGCATATCACGCCGAGTGTCTTGTATACTGCCA
AGAGCTTCTTGAGCTCCAAAGAAAGTGGGACGAGCCATATATTGAGTTAAAAGCACCTGATGATCCAAGAAAAGAGACACTGAAGCCTAGCAAACGTCAAAAGAAATCCC
GCTAGGCATAACTATGTTCGATATTCGCTTACCTGACTTGAGAATCTGATGATTCTTCCGAAGTAAGGGAGGCTCATGCACAAAATTGATAGTGTGTTATGAATAGGCTG
ATTACTCTATGGATACAACAATTTGTATACTCAGCTATGAAAACAGTGAAGTATATAAAATATTTGTGTGCTGTATGTATCCATTTTCTGTGCGCTAATATCACTACACA
GCGGAAGAAGTTATTTCTATTTTTGTCAGCAAAGAACAGGCTTACAGAATTTATTTGTTCACAACATTTGAATTATATACTTCATTTCCTTTCCTTT
Protein sequenceShow/hide protein sequence
MADESQQHQSESQPPLEVDSAPPPPPRFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETLKPSKRQKKSR