; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004635 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004635
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr01:4481685..4482436
RNA-Seq ExpressionPI0004635
SyntenyPI0004635
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.0e-6669.9Show/hide
Query:  IGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHN
        IG SIQQFD DVTQEYIHWYNNITRLYITRP AAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHN
Subjt:  IGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHN

Query:  VEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNK
        VEEVP  TQTQSQTGYGS M MM   FG GY DSEVGTGY  +G+ P S YMDVGPS  YM            E+   +CT + ++++++   T K
Subjt:  VEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNK

KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.5e-5865.37Show/hide
Query:  IAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY
        +AIG SIQQFD DVTQEYIHWYNNITRLYITR GA    +RSNN RLRDVADDPQQVLDICNNN RYMEEIH MY+V IVP PV+R RVRVEE ELDEVY
Subjt:  IAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY

Query:  HNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNKNQ
        HNVEEVP  TQTQSQT YG S+M MM  FGVG+             +  L ++M V    + M      DT+    NI NIC MKHLQ  QI KSTNKNQ
Subjt:  HNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNKNQ

Query:  RIKRS
        R KR+
Subjt:  RIKRS

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.1e-6480.37Show/hide
Query:  IAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY
        +AI  SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VY
Subjt:  IAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY

Query:  HNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYM
        HNVEEVPS TQTQSQTGYGS M MM   F  GYCD EVG GY  +GVGP SSY+DV PSTSYM
Subjt:  HNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYM

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.2e-6770.41Show/hide
Query:  IGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHN
        IG SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHN
Subjt:  IGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHN

Query:  VEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNK
        VEEVP  TQTQSQTGYGS M MM   FG GY DSEVGTGY  +G+ P S YMDVGPS  YM            E+   +CT + ++++++   T K
Subjt:  VEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNK

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]6.2e-6980.47Show/hide
Query:  QSRRRFIAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEP
        +SRRRF+ I  SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRDV +DPQQVLDICNNNERYME+IH +YD+PIVPPPV+R R RVEE 
Subjt:  QSRRRFIAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEP

Query:  ELDEVYHNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYM
        ELDEVYHNVEEVP  TQTQSQTGYGS M MM   FG GYCDSEV  GY  + VGPLSSYMDVGPSTSYM
Subjt:  ELDEVYHNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYM

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.8e-6769.9Show/hide
Query:  IGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHN
        IG SIQQFD DVTQEYIHWYNNITRLYITRP AAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHN
Subjt:  IGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHN

Query:  VEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNK
        VEEVP  TQTQSQTGYGS M MM   FG GY DSEVGTGY  +G+ P S YMDVGPS  YM            E+   +CT + ++++++   T K
Subjt:  VEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNK

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.0e-6480.37Show/hide
Query:  IAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY
        +AI  SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VY
Subjt:  IAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY

Query:  HNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYM
        HNVEEVPS TQTQSQTGYGS M MM   F  GYCD EVG GY  +GVGP SSY+DV PSTSYM
Subjt:  HNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYM

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.1e-5865.37Show/hide
Query:  IAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY
        +AIG SIQQFD DVTQEYIHWYNNITRLYITR GA    +RSNN RLRDVADDPQQVLDICNNN RYMEEIH MY+V IVP PV+R RVRVEE ELDEVY
Subjt:  IAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY

Query:  HNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNKNQ
        HNVEEVP  TQTQSQT YG S+M MM  FGVG+             +  L ++M V    + M      DT+    NI NIC MKHLQ  QI KSTNKNQ
Subjt:  HNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNKNQ

Query:  RIKRS
        R KR+
Subjt:  RIKRS

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.7e-6870.41Show/hide
Query:  IGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHN
        IG SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHN
Subjt:  IGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHN

Query:  VEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNK
        VEEVP  TQTQSQTGYGS M MM   FG GY DSEVGTGY  +G+ P S YMDVGPS  YM            E+   +CT + ++++++   T K
Subjt:  VEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNK

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein3.0e-6980.47Show/hide
Query:  QSRRRFIAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEP
        +SRRRF+ I  SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRDV +DPQQVLDICNNNERYME+IH +YD+PIVPPPV+R R RVEE 
Subjt:  QSRRRFIAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEP

Query:  ELDEVYHNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYM
        ELDEVYHNVEEVP  TQTQSQTGYGS M MM   FG GYCDSEV  GY  + VGPLSSYMDVGPSTSYM
Subjt:  ELDEVYHNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCGGGTCGATACTCATTTAGTCGTGCGATGGCAATCTCGTAGAAGATTCATTGCCATTGGAGCTTCGATTCAGCAATTTGATCAGGATGTGACTCAAGAATACAT
CCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCGCAAC
AAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAA
GAACCTGAACTTGATGAAGTTTACCATAACGTAGAAGAAGTACCTTCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCTCGATGATGATGATGATGCTAGCTTT
TGGAGTAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGGCTCAGGGGTCGGTCCATTGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCGCATGG
ACATGGACACGGACACGAACGCGACCGCGGAAAACATAACGAATATTTGTACTATGAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATC
AAGAGGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCGGGTCGATACTCATTTAGTCGTGCGATGGCAATCTCGTAGAAGATTCATTGCCATTGGAGCTTCGATTCAGCAATTTGATCAGGATGTGACTCAAGAATACAT
CCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCGCAAC
AAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAA
GAACCTGAACTTGATGAAGTTTACCATAACGTAGAAGAAGTACCTTCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCTCGATGATGATGATGATGCTAGCTTT
TGGAGTAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGGCTCAGGGGTCGGTCCATTGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCGCATGG
ACATGGACACGGACACGAACGCGACCGCGGAAAACATAACGAATATTTGTACTATGAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATC
AAGAGGAGCTAG
Protein sequenceShow/hide protein sequence
MRRVDTHLVVRWQSRRRFIAIGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVE
EPELDEVYHNVEEVPSVTQTQSQTGYGSSMMMMMLAFGVGYCDSEVGTGYNGSGVGPLSSYMDVGPSTSYMRMDMDTDTNATAENITNICTMKHLQTSQIHKSTNKNQRI
KRS