; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004644 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004644
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description40S ribosomal protein S24
Genome locationchr02:14762954..14765584
RNA-Seq ExpressionPI0004644
SyntenyPI0004644
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001976 - Ribosomal protein S24e
IPR012678 - Ribosomal protein L23/L15e core domain superfamily
IPR018098 - Ribosomal S24e conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588329.1 40S ribosomal protein S24-2, partial [Cucurbita argyrosperma subsp. sororia]4.4e-6599.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_004142519.1 40S ribosomal protein S24-1 [Cucumis sativus]1.3e-6498.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_008455742.1 PREDICTED: 40S ribosomal protein S24-1 [Cucumis melo]1.3e-6499.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKD NAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_008462725.1 PREDICTED: 40S ribosomal protein S24-1 [Cucumis melo]3.4e-65100Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_022933090.1 40S ribosomal protein S24-1-like [Cucurbita moschata]4.4e-6599.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

TrEMBL top hitse value%identityAlignment
A0A1S3CHL4 40S ribosomal protein S241.6e-65100Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

A0A5D3D4C1 40S ribosomal protein S246.2e-6599.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKD NAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

A0A5D3E1B6 40S ribosomal protein S241.6e-65100Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

A0A6J1F3Y6 40S ribosomal protein S242.1e-6599.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

A0A6J1I401 40S ribosomal protein S242.1e-6599.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

SwissProt top hitse value%identityAlignment
Q56JU9 40S ribosomal protein S242.0e-3664.39Show/hide
Query:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS
        VTIRTRKFMTNRLL RKQ +IDVLHPG+  V K E++EKLA++Y     + IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + S
Subjt:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS

Query:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        RKQ KERKNR KK+RG  K        AGKKK
Subjt:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

Q5RAQ8 40S ribosomal protein S242.0e-3664.39Show/hide
Query:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS
        VTIRTRKFMTNRLL RKQ +IDVLHPG+  V K E++EKLA++Y     + IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + S
Subjt:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS

Query:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        RKQ KERKNR KK+RG  K        AGKKK
Subjt:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

Q8LC83 40S ribosomal protein S24-27.0e-5886.36Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTR FMTNRLL+RKQF+IDVLHPGR NVSKAELKEKLAR+Y+VKD NAIF FKFRTHFGGGKS+G+GLIYD+VENAKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA D  K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Q962Q6 40S ribosomal protein S242.8e-3862.88Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        M +   TIRTRKFMTNRLL+RKQ + DVLHPG+P VSK E++EKLA++Y V   + +FVF F+T+FGGGKSTGF LIYD+++ AKK+EPK+RL R+GL  
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K   +RKQ KERKNR KK+RG KK+K   AAK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Q9SS17 40S ribosomal protein S24-11.3e-5989.39Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTRKFMTNRLLSRKQF+IDVLHPGR NVSKAELKEKLAR+Y+VKD NAIFVFKFRTHFGGGKS+GFGLIYD+VE+AKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA DA K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Arabidopsis top hitse value%identityAlignment
AT3G04920.1 Ribosomal protein S24e family protein9.1e-6189.39Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTRKFMTNRLLSRKQF+IDVLHPGR NVSKAELKEKLAR+Y+VKD NAIFVFKFRTHFGGGKS+GFGLIYD+VE+AKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA DA K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

AT5G28060.1 Ribosomal protein S24e family protein5.0e-5986.36Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTR FMTNRLL+RKQF+IDVLHPGR NVSKAELKEKLAR+Y+VKD NAIF FKFRTHFGGGKS+G+GLIYD+VENAKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA D  K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACAAGGCAGTCACCATACGAACCCGGAAGTTCATGACCAACCGGCTTCTCTCCAGGAAGCAATTTATCATTGATGTTCTTCACCCAGGAAGACCAAATGTCTC
CAAGGCAGAGCTGAAGGAAAAGTTAGCAAGAATATATGATGTGAAGGATGCAAATGCAATTTTTGTCTTTAAGTTCCGAACTCACTTTGGAGGTGGAAAATCAACTGGGT
TCGGTTTGATTTATGATTCTGTTGAAAATGCCAAAAAATATGAGCCCAAGTATAGGCTCATCAGGAATGGACTTGACACTAAAGTAGAAAAATCAAGGAAGCAAATGAAG
GAGAGGAAGAACAGAGCGAAGAAGATTCGTGGAGTAAAGAAAACAAAGGCCTCAGATGCTGCCAAGGCTGGAAAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
TTGGAAGGAAAGCCCATAACAATAACCCATTATAGCAACAATGGCGGCAACTCCTAGGGTTTCATCACTATAACTCAAAAGGTTTCATCACTATCTTATTCTTTCCTCTT
TGCCGAACCTTCGTCTTCCTGCTCTCTGCTACGCTTCACTTCCTTCACCTCATCCATTCGTCAACGATAATGGCGGACAAGGCAGTCACCATACGAACCCGGAAGTTCAT
GACCAACCGGCTTCTCTCCAGGAAGCAATTTATCATTGATGTTCTTCACCCAGGAAGACCAAATGTCTCCAAGGCAGAGCTGAAGGAAAAGTTAGCAAGAATATATGATG
TGAAGGATGCAAATGCAATTTTTGTCTTTAAGTTCCGAACTCACTTTGGAGGTGGAAAATCAACTGGGTTCGGTTTGATTTATGATTCTGTTGAAAATGCCAAAAAATAT
GAGCCCAAGTATAGGCTCATCAGGAATGGACTTGACACTAAAGTAGAAAAATCAAGGAAGCAAATGAAGGAGAGGAAGAACAGAGCGAAGAAGATTCGTGGAGTAAAGAA
AACAAAGGCCTCAGATGCTGCCAAGGCTGGAAAGAAGAAATGAGTTTACTGCTGTGTTTTTGTGCCTCAGTGTTTTTTCTCTATCATGTCTTTATTTCATCCCTCTAAAT
TTTAATTCTTAAGTGGTGTTGGGCACTCCCAATGAAATCAATGTCTGGAGAATTATTGACACCAATGTTTTAGCCATTAATTTTGAATTTGGGGAGTTTTTTGCTGGGAA
CAATTGACATTAGTGACCATATATTTTATAGTTATCAAAAGTTACATTAAAAAAAGTGGTTGAAGTTGTGTTGTCTTCCTCGACTCTGAAAGACAGCGAAAGAAATTTGA
AAATTGGTTTATGAATGGGTGGTAATGCCTTGAATTCTTGAGCAAAATATCAGGTAGGGGTGTAAAAATCTGCACCACGGTGGATCGAATCGAACCGGTTTAGATTCTTG
CTGCCCACCACCAACCCTCTCTCACATAAATTAGTTATTTGCTCTCCCTACCTCTTTCTCCTGACCTCACTCTCTCCTAAAAAGGAATATGTTTTTAGAAAAACGATGGT
CTGAGATCTAGAAGAATA
Protein sequenceShow/hide protein sequence
MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMK
ERKNRAKKIRGVKKTKASDAAKAGKKK