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PI0004663 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004663
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr02:6971483..6972136
RNA-Seq ExpressionPI0004663
SyntenyPI0004663
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046254.1 hypothetical protein E6C27_scaffold284G00570 [Cucumis melo var. makuwa]7.2e-6278.95Show/hide
Query:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA
        ALCMW+DIQDKIMRTPFEYIPRLRPEIA VLS I KIHAD LT LE YLNSYLKRVD+FNDVQSSYSAQLL  DK RQL+EKT  IKEALTL+ QLR DA
Subjt:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA

Query:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLESTLLSPKKPLR
        KVIQER  +LSL++KELE RL+SIN +SEQLSILSCEK EAID++ELEVAKLQDE NTLE TLL  +K  R
Subjt:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLESTLLSPKKPLR

KAA0052363.1 hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]3.6e-6182.1Show/hide
Query:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA
        ALCMW+DIQDKIMRTPFEYIPRLRPEIA VLS I KIHAD LT LE YLNSYLKRVD+FNDVQSSYSAQL LTDK RQL+EKT  IKEALTL+ QLR DA
Subjt:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA

Query:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST
        KVIQER  +LSL++KELE RLQSIN +SEQLSILS EK EAID++ELEVAKLQDE NTLEST
Subjt:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST

KAA0060431.1 hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa]2.5e-6282.1Show/hide
Query:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA
        ALCMW+DIQDKIMRTPFEYIPRLRPEIA VLS I KIH + LTPLE YLNSYLKRVD+FNDVQSSYSAQLL TDK RQLDEKT  I+EALTLM++LREDA
Subjt:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA

Query:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST
         VIQERA QLSL+KKELE RLQS+N +SEQLSILSCEK EAI ++ELEVAKLQDE NTLE T
Subjt:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]1.6e-6181.48Show/hide
Query:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA
        ALCMW+DIQDKIMRTPFEYIPRLRPEIA VLS I KIHAD LT LE YLNSYLKRVD+FNDVQSSYSAQLL TDK RQL+EKT  IKE LTL+ QLR DA
Subjt:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA

Query:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST
        KVIQER  +LSL++KELE RL+SIN +SEQLSILSCEK EAID++ELEVAKLQDE NTLEST
Subjt:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]1.6e-6182.1Show/hide
Query:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA
        ALCMW+DIQDKIMRT FEYIPRLRPEIA VLS I KIHAD LT LE YLNSYLKRVD+FNDVQSSYSAQLL TDK RQL+EKT  IKEALTL+ QLR DA
Subjt:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA

Query:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST
        KVIQER  +LSL++KELE RLQSIN +SEQLSILSCEK EAID++ELEVAKLQDE NTLEST
Subjt:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST

TrEMBL top hitse value%identityAlignment
A0A5A7TT69 Uncharacterized protein3.5e-6278.95Show/hide
Query:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA
        ALCMW+DIQDKIMRTPFEYIPRLRPEIA VLS I KIHAD LT LE YLNSYLKRVD+FNDVQSSYSAQLL  DK RQL+EKT  IKEALTL+ QLR DA
Subjt:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA

Query:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLESTLLSPKKPLR
        KVIQER  +LSL++KELE RL+SIN +SEQLSILSCEK EAID++ELEVAKLQDE NTLE TLL  +K  R
Subjt:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLESTLLSPKKPLR

A0A5A7U8X8 PMD domain-containing protein1.7e-6182.1Show/hide
Query:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA
        ALCMW+DIQDKIMRTPFEYIPRLRPEIA VLS I KIHAD LT LE YLNSYLKRVD+FNDVQSSYSAQL LTDK RQL+EKT  IKEALTL+ QLR DA
Subjt:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA

Query:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST
        KVIQER  +LSL++KELE RLQSIN +SEQLSILS EK EAID++ELEVAKLQDE NTLEST
Subjt:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST

A0A5A7V3X5 PMD domain-containing protein1.2e-6282.1Show/hide
Query:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA
        ALCMW+DIQDKIMRTPFEYIPRLRPEIA VLS I KIH + LTPLE YLNSYLKRVD+FNDVQSSYSAQLL TDK RQLDEKT  I+EALTLM++LREDA
Subjt:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA

Query:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST
         VIQERA QLSL+KKELE RLQS+N +SEQLSILSCEK EAI ++ELEVAKLQDE NTLE T
Subjt:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST

A0A5A7VHW8 PMD domain-containing protein7.7e-6281.48Show/hide
Query:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA
        ALCMW+DIQDKIMRTPFEYIPRLRPEIA VLS I KIHAD LT LE YLNSYLKRVD+FNDVQSSYSAQLL TDK RQL+EKT  IKE LTL+ QLR DA
Subjt:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA

Query:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST
        KVIQER  +LSL++KELE RL+SIN +SEQLSILSCEK EAID++ELEVAKLQDE NTLEST
Subjt:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST

A0A5D3BW91 Uncharacterized protein7.7e-6282.1Show/hide
Query:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA
        ALCMW+DIQDKIMRT FEYIPRLRPEIA VLS I KIHAD LT LE YLNSYLKRVD+FNDVQSSYSAQLL TDK RQL+EKT  IKEALTL+ QLR DA
Subjt:  ALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDA

Query:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST
        KVIQER  +LSL++KELE RLQSIN +SEQLSILSCEK EAID++ELEVAKLQDE NTLEST
Subjt:  KVIQERATQLSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLEST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTATGCATGTGGGACGACATTCAAGACAAGATCATGCGCACTCCTTTTGAATATATCCCAAGACTTAGGCCGGAAATAGCAATGGTCCTTTCAGAAATTGCAAA
GATCCATGCAGACAACCTGACTCCTCTTGAAGTATATTTGAATAGCTACCTTAAGAGGGTAGACAGCTTCAATGATGTACAATCTTCATATTCCGCACAACTGTTGTTGA
CGGATAAAACTCGTCAATTGGACGAGAAGACATTTGTCATCAAAGAAGCCTTGACTTTGATGGACCAACTACGAGAAGATGCCAAAGTTATTCAGGAGAGGGCTACACAG
TTATCCTTGGATAAGAAAGAACTGGAGAGTAGACTTCAGAGTATAAATACTAAGTCTGAACAGCTATCCATCTTATCTTGTGAGAAATATGAGGCCATAGATAGGAAAGA
ACTAGAAGTTGCTAAGCTTCAAGACGAAGCTAACACTCTTGAAAGCACCCTGCTATCACCGAAGAAGCCACTGAGGCCTTGGCTACGGTTCGTAAGAGCATGGAGACCGC
ACGCGAAGAATTCGGGAACTTCAAATGGAAGCTTTGACTTTGCCCCCCTTTGCCCCCATTTTTTTTATTCTTTTGTTGCCTTTGCTGTAAATGTGACATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTATGCATGTGGGACGACATTCAAGACAAGATCATGCGCACTCCTTTTGAATATATCCCAAGACTTAGGCCGGAAATAGCAATGGTCCTTTCAGAAATTGCAAA
GATCCATGCAGACAACCTGACTCCTCTTGAAGTATATTTGAATAGCTACCTTAAGAGGGTAGACAGCTTCAATGATGTACAATCTTCATATTCCGCACAACTGTTGTTGA
CGGATAAAACTCGTCAATTGGACGAGAAGACATTTGTCATCAAAGAAGCCTTGACTTTGATGGACCAACTACGAGAAGATGCCAAAGTTATTCAGGAGAGGGCTACACAG
TTATCCTTGGATAAGAAAGAACTGGAGAGTAGACTTCAGAGTATAAATACTAAGTCTGAACAGCTATCCATCTTATCTTGTGAGAAATATGAGGCCATAGATAGGAAAGA
ACTAGAAGTTGCTAAGCTTCAAGACGAAGCTAACACTCTTGAAAGCACCCTGCTATCACCGAAGAAGCCACTGAGGCCTTGGCTACGGTTCGTAAGAGCATGGAGACCGC
ACGCGAAGAATTCGGGAACTTCAAATGGAAGCTTTGACTTTGCCCCCCTTTGCCCCCATTTTTTTTATTCTTTTGTTGCCTTTGCTGTAAATGTGACATTTTAG
Protein sequenceShow/hide protein sequence
MALCMWDDIQDKIMRTPFEYIPRLRPEIAMVLSEIAKIHADNLTPLEVYLNSYLKRVDSFNDVQSSYSAQLLLTDKTRQLDEKTFVIKEALTLMDQLREDAKVIQERATQ
LSLDKKELESRLQSINTKSEQLSILSCEKYEAIDRKELEVAKLQDEANTLESTLLSPKKPLRPWLRFVRAWRPHAKNSGTSNGSFDFAPLCPHFFYSFVAFAVNVTF