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PI0004714 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004714
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr05:8857218..8858972
RNA-Seq ExpressionPI0004714
SyntenyPI0004714
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]1.3e-4449.12Show/hide
Query:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK----------------------------------------------------
        DFNA +VH EA GGSPI  +MEEFDLAIR+ADLVE S+Q NWFTWTSK                                                    
Subjt:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK----------------------------------------------------

Query:  ------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFI
                    +PSF +VV+ +W R  GVSLLVSL+RNLH LK +LRR FG HI  LSEEV  AKEAMD AQREVER+P S  LSR   LAT  FW+ +
Subjt:  ------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFI

Query:  RREEASLHHKSRIRWLELGDQNLPFF
        R EEASL  KS++RWL LGDQN  FF
Subjt:  RREEASLHHKSRIRWLELGDQNLPFF

KAA0048521.1 uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa]1.7e-5265.54Show/hide
Query:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRR
        DFNA +VH EA GGSPI  +ME+FDLAIR+ADLVE S+Q NWFTWTSK               DPSF +VVS +W R  GVS LVSLIRNL  LK  +RR
Subjt:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRR

Query:  HFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF
        HFG HI  LSEEVR AKEAMDRAQREV+R+P S  LSR  GLAT AFW+ +R EEASLH K RIRWLELG+QN  FF
Subjt:  HFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.5e-4854.21Show/hide
Query:  RRANSLDQRW-LPTTRESDFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK----------------------------------
        RR   +   W  P     DFNA +VHFEA GGSPI  +ME+FDLA R+ADLVE S+Q NWFTWTSK                                  
Subjt:  RRANSLDQRW-LPTTRESDFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK----------------------------------

Query:  DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSR
        DPSF +VV+ +W R  GVS LVSL+RNL +LK  LRR FG HI  L+EEV  AKE MDRAQREVE +P S  LSR  GLAT AFW+ +R EEASL  KSR
Subjt:  DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSR

Query:  IRWLELGDQNLPFF
        IRWLELGDQN  FF
Subjt:  IRWLELGDQNLPFF

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]1.2e-4553.81Show/hide
Query:  NSLDQRWLPTTRESDFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------------DPSFSDVVSSVWVRKIG
        N +D++++      DFNA +V+ EA GGSPI  +ME+FDLAIR+ DLVE  +Q NWFTWTSK                     DPSF +VV+  W R  G
Subjt:  NSLDQRWLPTTRESDFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------------DPSFSDVVSSVWVRKIG

Query:  VSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF
        VS LVSL++NLH LK +LR  FG HI  L+E+VR AK AMD AQR+VER+P S  LSR   LAT  FW+ +R EEASL  KSRIRWL+LGDQN  FF
Subjt:  VSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF

TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]1.3e-5265.54Show/hide
Query:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRR
        DFNA +VH EA GGSPI  +ME+FDLAIR+ADLVE S+Q NWFTWTSK               DPSF +VVS +W R  GVS LVSLIRNL  LK  +RR
Subjt:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRR

Query:  HFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF
        HFG HI  LSEEVR AKEAMDRAQREV+R+P S  LSR  GLAT AFW+ +R EEASLH K RIRWLELG+QN  FF
Subjt:  HFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF

TrEMBL top hitse value%identityAlignment
A0A5A7TZS0 Reverse transcriptase domain-containing protein6.2e-4549.12Show/hide
Query:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK----------------------------------------------------
        DFNA +VH EA GGSPI  +MEEFDLAIR+ADLVE S+Q NWFTWTSK                                                    
Subjt:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK----------------------------------------------------

Query:  ------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFI
                    +PSF +VV+ +W R  GVSLLVSL+RNLH LK +LRR FG HI  LSEEV  AKEAMD AQREVER+P S  LSR   LAT  FW+ +
Subjt:  ------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFI

Query:  RREEASLHHKSRIRWLELGDQNLPFF
        R EEASL  KS++RWL LGDQN  FF
Subjt:  RREEASLHHKSRIRWLELGDQNLPFF

A0A5A7U4M4 Reverse transcriptase domain-containing protein8.1e-5365.54Show/hide
Query:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRR
        DFNA +VH EA GGSPI  +ME+FDLAIR+ADLVE S+Q NWFTWTSK               DPSF +VVS +W R  GVS LVSLIRNL  LK  +RR
Subjt:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRR

Query:  HFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF
        HFG HI  LSEEVR AKEAMDRAQREV+R+P S  LSR  GLAT AFW+ +R EEASLH K RIRWLELG+QN  FF
Subjt:  HFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein7.1e-4954.21Show/hide
Query:  RRANSLDQRW-LPTTRESDFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK----------------------------------
        RR   +   W  P     DFNA +VHFEA GGSPI  +ME+FDLA R+ADLVE S+Q NWFTWTSK                                  
Subjt:  RRANSLDQRW-LPTTRESDFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK----------------------------------

Query:  DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSR
        DPSF +VV+ +W R  GVS LVSL+RNL +LK  LRR FG HI  L+EEV  AKE MDRAQREVE +P S  LSR  GLAT AFW+ +R EEASL  KSR
Subjt:  DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSR

Query:  IRWLELGDQNLPFF
        IRWLELGDQN  FF
Subjt:  IRWLELGDQNLPFF

A0A5D3D5X6 Reverse transcriptase domain-containing protein5.6e-4653.81Show/hide
Query:  NSLDQRWLPTTRESDFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------------DPSFSDVVSSVWVRKIG
        N +D++++      DFNA +V+ EA GGSPI  +ME+FDLAIR+ DLVE  +Q NWFTWTSK                     DPSF +VV+  W R  G
Subjt:  NSLDQRWLPTTRESDFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------------DPSFSDVVSSVWVRKIG

Query:  VSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF
        VS LVSL++NLH LK +LR  FG HI  L+E+VR AK AMD AQR+VER+P S  LSR   LAT  FW+ +R EEASL  KSRIRWL+LGDQN  FF
Subjt:  VSLLVSLIRNLHDLKLVLRRHFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF

A0A5D3DXQ8 Reverse transcriptase domain-containing protein6.2e-5365.54Show/hide
Query:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRR
        DFNA +VH EA GGSPI  +ME+FDLAIR+ADLVE S+Q NWFTWTSK               DPSF +VVS +W R  GVS LVSLIRNL  LK  +RR
Subjt:  DFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSK---------------DPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRR

Query:  HFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF
        HFG HI  LSEEVR AKEAMDRAQREV+R+P S  LSR  GLAT AFW+ +R EEASLH K RIRWLELG+QN  FF
Subjt:  HFGSHIMDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAGGCGAGCTAATTCACTTGACCAGCGTTGGTTGCCAACTACTCGAGAGAGTGACTTTAATGCTACGCAGGTGCACTTTGAAGCTTGTGGTGGGAGTCCGATTTC
TTGTGATATGGAGGAGTTTGATCTTGCTATTCGTGAGGCTGACTTGGTTGAGTCGTCTATTCAGGATAACTGGTTCACGTGGACGAGTAAGGATCCTTCATTCAGTGATG
TGGTGTCTTCAGTTTGGGTGAGAAAGATTGGTGTTTCTCTGTTGGTGAGTCTTATACGAAATTTACATGACCTTAAACTTGTCCTTCGTAGACATTTTGGTAGCCATATT
ATGGACCTTAGTGAGGAGGTACGCTTTGCTAAAGAGGCTATGGATAGGGCCCAGCGTGAGGTTGAGCGGGATCCTGAGTCTGTTGAGTTGAGTCGGCTTACTGGGCTTGC
TACTATGGCTTTCTGGTCGTTTATTCGTCGGGAAGAAGCCTCTCTTCATCATAAATCACGGATTAGGTGGTTGGAGCTTGGTGATCAGAATTTGCCTTTTTTCATCGTTC
AGTTCGTTCCCATATTTGTCATAATAACCTGCTTTCTGTTGTGGATTCTGAGGGTATACGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAGGCGAGCTAATTCACTTGACCAGCGTTGGTTGCCAACTACTCGAGAGAGTGACTTTAATGCTACGCAGGTGCACTTTGAAGCTTGTGGTGGGAGTCCGATTTC
TTGTGATATGGAGGAGTTTGATCTTGCTATTCGTGAGGCTGACTTGGTTGAGTCGTCTATTCAGGATAACTGGTTCACGTGGACGAGTAAGGATCCTTCATTCAGTGATG
TGGTGTCTTCAGTTTGGGTGAGAAAGATTGGTGTTTCTCTGTTGGTGAGTCTTATACGAAATTTACATGACCTTAAACTTGTCCTTCGTAGACATTTTGGTAGCCATATT
ATGGACCTTAGTGAGGAGGTACGCTTTGCTAAAGAGGCTATGGATAGGGCCCAGCGTGAGGTTGAGCGGGATCCTGAGTCTGTTGAGTTGAGTCGGCTTACTGGGCTTGC
TACTATGGCTTTCTGGTCGTTTATTCGTCGGGAAGAAGCCTCTCTTCATCATAAATCACGGATTAGGTGGTTGGAGCTTGGTGATCAGAATTTGCCTTTTTTCATCGTTC
AGTTCGTTCCCATATTTGTCATAATAACCTGCTTTCTGTTGTGGATTCTGAGGGTATACGAGTGA
Protein sequenceShow/hide protein sequence
MLRRANSLDQRWLPTTRESDFNATQVHFEACGGSPISCDMEEFDLAIREADLVESSIQDNWFTWTSKDPSFSDVVSSVWVRKIGVSLLVSLIRNLHDLKLVLRRHFGSHI
MDLSEEVRFAKEAMDRAQREVERDPESVELSRLTGLATMAFWSFIRREEASLHHKSRIRWLELGDQNLPFFIVQFVPIFVIITCFLLWILRVYE