CuGenDBv2

Gene ID	PI0004766
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	cytochrome c oxidase subunit 6a, mitochondrial
Genome location	chr06:22170769..22177558
RNA-Seq Expression	PI0004766
Synteny	PI0004766
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005751 - mitochondrial respiratory chain complex IV (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0030234 - enzyme regulator activity (molecular function)
InterPro domains	IPR001349 - Cytochrome c oxidase, subunit VIa IPR036418 - Cytochrome c oxidase, subunit VIa superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008450167.1 PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Cucumis melo]

7.0e-49

97.96

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSN LRAA+RGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_011650608.1 cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sativus]

4.1e-49

97.96

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSNLLRAA+RGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_022929363.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata]

3.8e-47

94.9

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSNLLRAA RGASRNS QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_023551866.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo]

2.3e-47

94.9

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSNLLRAA+RGASRNS QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_038905594.1 cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida]

2.0e-48

96.94

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSNLLRAAVRGASRNS QPKRGFASSAHDDARETAKWEKITYAGI TC+ILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L3I0 Uncharacterized protein

1.7e-48

97.92

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Query:  MASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MASIRSNLLRAA+RGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A1S3BPM0 cytochrome c oxidase subunit 6a, mitochondrial

3.4e-49

97.96

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSN LRAA+RGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A6J1ERW3 cytochrome c oxidase subunit 6a, mitochondrial-like

1.9e-47

94.9

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSNLLRAA RGASRNS QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A6J1J8L1 cytochrome c oxidase subunit 6a, mitochondrial-like

1.2e-46

93.88

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA IRSNLLRAA RGASRN  QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A6J1KMD3 cytochrome c oxidase subunit 6a, mitochondrial-like

2.7e-46

91.84

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSNLLRAA+RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGI  C+ LAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

SwissProt top hits

e value

%identity

Alignment

Q9T070 Cytochrome c oxidase subunit 6a, mitochondrial

3.3e-33

69.7

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MA A +RS L RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

Arabidopsis top hits

e value

%identity

Alignment

AT4G37830.1 cytochrome c oxidase-related

2.3e-34

69.7

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MA A +RS L RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

AT4G37830.2 cytochrome c oxidase-related

4.0e-26

61.62

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Query:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MA A +RS L RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA Y LSKGH H E+PP          EFPWGPDGLFEVKH+
Subjt:  MAMASIRSNLLRAAVRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

Sequences

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CDS sequence

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ATGGCAATGGCGTCGATCCGATCCAATCTTCTTCGCGCCGCCGTACGCGGTGCCTCTCGAAACTCCGTTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGACGC
TCGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCAGGCATTGTAACCTGCTCTATTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTG
CATATCCATATTTGCACATACGCAATAAAGAGTTCCCTTGGGGTCCTGATGGTCTCTTTGAGGTGAAGCATCACTGA

mRNA sequence

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CTTGGAATTATATTGGTGAAAAAGTCGCAATCTAAATCGCAAGGGTTTGGTAATTTCGTCGACTCGGCAATTTGTGAGAGAAAGAACCAAAAAGAAAATGGCAATGGCGT
CGATCCGATCCAATCTTCTTCGCGCCGCCGTACGCGGTGCCTCTCGAAACTCCGTTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGACGCTCGTGAAACGGCA
AAGTGGGAGAAGATTACTTATGCAGGCATTGTAACCTGCTCTATTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGCATATCCATATTT
GCACATACGCAATAAAGAGTTCCCTTGGGGTCCTGATGGTCTCTTTGAGGTGAAGCATCACTGAGGATTACTTTTGGGTTCAAAAGCACATCAGACTTCTCATTCTGTTC
CATATCAGAAAGACTTCATGGACTGGTTTGCAGAGGTTCGCAGTAAGCTGTGCTTGGATTGAAAAATGAGCTTGTAAAACTACTGGTACTTAATGGGTAATAATTGTTAC
TTTGGTGAACTGAAACAATTGCTAGGTTTTATCAACACAGTTGGGTCATTCTCACAGTTTAAATTGTAAACCCCAAACCAACTTGGATGAATAACTTCAAAAATAAAATT
ATAAACATCGAGACTCGTTTCACACCACTAAA

Protein sequence

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MAMASIRSNLLRAAVRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

PI0004766 (gene) of Melon (PI 482460) v1 genome