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PI0004788 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004788
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:16813924..16814415
RNA-Seq ExpressionPI0004788
SyntenyPI0004788
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045193.1 hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa]1.0e-2856.76Show/hide
Query:  IIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGITQDELRLTLFPFTLKDDVKR
        I+IAH++N PI +YA   LY FN+GI YPAFG N RF+MKP ML MIQ   QF GYL EDP DHIKS Y +C  FHL  ++Q++L +T F FTLKDD+K+
Subjt:  IIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGITQDELRLTLFPFTLKDDVKR

Query:  WICRMKAAEIT
        W+  ++ A  T
Subjt:  WICRMKAAEIT

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]3.7e-2653.39Show/hide
Query:  MANNNNQTVPFNNVTHKTHSIIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGI
        M N NNQ +P N      +   +A D ++PIR YA  +LYDFN GI YP F +NTRFE+K VMLQ+IQNA QFR +  +DPHD+I++FYSIC  FH+ GI
Subjt:  MANNNNQTVPFNNVTHKTHSIIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGI

Query:  TQDELRLTLFPFTLKDDV
        + +ELR T  PF L  D+
Subjt:  TQDELRLTLFPFTLKDDV

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]9.0e-2559.18Show/hide
Query:  MANNNNQTVPFNNVTHKTHSI-IIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHL
        MA+N N  VP N+ T    ++ +IAH+++ PIR Y   +LYDFN+GI Y  FG+N  FE+KPVMLQMIQ A QF GY GEDPH+HIKSFYSIC  FH+
Subjt:  MANNNNQTVPFNNVTHKTHSI-IIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHL

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]5.3e-3343.01Show/hide
Query:  MSGGEQPKLNFDPEIERTLQQLRRQRRQALRMANNNNQTVPFN-----------------------NVTHKTHSIIIAHDVNKPIRKYALASLYDFNMGI
        MS G+ P  + DPEIERT ++  RQ +Q       +NQT+  N                       +  + T+ I++AHD N+P+R+YA  +LY+F  GI
Subjt:  MSGGEQPKLNFDPEIERTLQQLRRQRRQALRMANNNNQTVPFN-----------------------NVTHKTHSIIIAHDVNKPIRKYALASLYDFNMGI

Query:  VYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGITQDELRLTLFPFTLKDDVKRWICRMKAAEITS
        + P F  N RFEMKPVMLQM+Q A QF G  GEDPH H+KSF  IC  F + G+ QD +RLTLFPF+L+D+ ++W    +  EIT+
Subjt:  VYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGITQDELRLTLFPFTLKDDVKRWICRMKAAEITS

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]6.2e-2643.2Show/hide
Query:  MSGGEQPKLNFDPEIERTLQQLRRQR---RQALRMANNNNQTVPFNN--VTHKTHS-IIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVM
        MS    P+   +PEI+ T +    Q    R+ + MA+NNN   P  N  V       + +A D N PIR YA  +LYDF+ GI  P   +N RFE+KPVM
Subjt:  MSGGEQPKLNFDPEIERTLQQLRRQR---RQALRMANNNNQTVPFNN--VTHKTHS-IIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVM

Query:  LQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGITQDELRLTLFPFTLKDDVKRWICRMKAAEITS
        +QMIQN  QF     E+PH H+  F  +C  F + GIT   +RL LFP+TL+D  KRW   ++A EITS
Subjt:  LQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGITQDELRLTLFPFTLKDDVKRWICRMKAAEITS

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein5.0e-2956.76Show/hide
Query:  IIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGITQDELRLTLFPFTLKDDVKR
        I+IAH++N PI +YA   LY FN+GI YPAFG N RF+MKP ML MIQ   QF GYL EDP DHIKS Y +C  FHL  ++Q++L +T F FTLKDD+K+
Subjt:  IIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGITQDELRLTLFPFTLKDDVKR

Query:  WICRMKAAEIT
        W+  ++ A  T
Subjt:  WICRMKAAEIT

A0A5A7UDN8 Uncharacterized protein2.7e-1951.55Show/hide
Query:  NNQTVPFNNVTHKTHSIIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGIT
        NNQ  P    T + +   +AHD++KPI+ YA  +LYDFN GI Y AFG+N  FE+K +ML M QNA QF G+  EDP+DHI++FY IC  F++L I+
Subjt:  NNQTVPFNNVTHKTHSIIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGIT

A0A5A7V2U7 Putative disease resistance RPP13-like protein 11.8e-2653.39Show/hide
Query:  MANNNNQTVPFNNVTHKTHSIIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGI
        M N NNQ +P N      +   +A D ++PIR YA  +LYDFN GI YP F +NTRFE+K VMLQ+IQNA QFR +  +DPHD+I++FYSIC  FH+ GI
Subjt:  MANNNNQTVPFNNVTHKTHSIIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHLLGI

Query:  TQDELRLTLFPFTLKDDV
        + +ELR T  PF L  D+
Subjt:  TQDELRLTLFPFTLKDDV

A0A5D3BVN1 Putative disease resistance RPP13-like protein 14.4e-2559.18Show/hide
Query:  MANNNNQTVPFNNVTHKTHSI-IIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHL
        MA+N N  VP N+ T    ++ +IAH+++ PIR Y   +LYDFN+GI Y  FG+N  FE+KPVMLQMIQ A QF GY GEDPH+HIKSFYSIC  FH+
Subjt:  MANNNNQTVPFNNVTHKTHSI-IIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGEDPHDHIKSFYSICFFFHL

A0A6J0ZYV0 uncharacterized protein LOC1104134131.2e-1937.91Show/hide
Query:  FDPEIERTLQQLRRQRRQALRMANNNNQTVPFNNVTHKTHSIIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGE
        FDP+IERT    RR RR+ L++A   NQT+  +N  +  ++I +  + N+ +R YA+  +   +  I  P+   N  FE+KP  +QMIQ++ QF G   +
Subjt:  FDPEIERTLQQLRRQRRQALRMANNNNQTVPFNNVTHKTHSIIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGE

Query:  DPHDHIKSFYSICFFFHLLGITQDELRLTLFPFTLKDDVKRWICRMKAAEITS
        DP+ H+ +F  IC  F   G+T D +RL LFPF+L+D  K W+  +    IT+
Subjt:  DPHDHIKSFYSICFFFHLLGITQDELRLTLFPFTLKDDVKRWICRMKAAEITS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGAGGAGAACAACCCAAACTCAACTTTGACCCCGAGATAGAACGAACACTTCAACAACTCAGAAGACAAAGGAGACAAGCGTTAAGAATGGCAAACAACAACAA
TCAAACAGTCCCTTTTAACAACGTTACCCATAAAACACACTCCATAATTATAGCCCATGACGTTAACAAGCCTATCAGAAAGTACGCATTGGCAAGTTTGTATGACTTCA
ACATGGGTATCGTCTACCCCGCATTTGGGGATAACACAAGATTTGAAATGAAGCCAGTAATGTTACAAATGATACAAAATGCTAGCCAATTTAGAGGCTACTTAGGTGAA
GATCCTCATGATCACATTAAGAGTTTTTATTCAATCTGTTTCTTTTTCCACTTGCTGGGCATAACACAAGATGAGCTACGCCTTACGCTCTTCCCTTTCACCCTGAAGGA
TGACGTGAAGAGATGGATATGTAGGATGAAGGCTGCAGAAATCACCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCGGAGGAGAACAACCCAAACTCAACTTTGACCCCGAGATAGAACGAACACTTCAACAACTCAGAAGACAAAGGAGACAAGCGTTAAGAATGGCAAACAACAACAA
TCAAACAGTCCCTTTTAACAACGTTACCCATAAAACACACTCCATAATTATAGCCCATGACGTTAACAAGCCTATCAGAAAGTACGCATTGGCAAGTTTGTATGACTTCA
ACATGGGTATCGTCTACCCCGCATTTGGGGATAACACAAGATTTGAAATGAAGCCAGTAATGTTACAAATGATACAAAATGCTAGCCAATTTAGAGGCTACTTAGGTGAA
GATCCTCATGATCACATTAAGAGTTTTTATTCAATCTGTTTCTTTTTCCACTTGCTGGGCATAACACAAGATGAGCTACGCCTTACGCTCTTCCCTTTCACCCTGAAGGA
TGACGTGAAGAGATGGATATGTAGGATGAAGGCTGCAGAAATCACCTCATAG
Protein sequenceShow/hide protein sequence
MSGGEQPKLNFDPEIERTLQQLRRQRRQALRMANNNNQTVPFNNVTHKTHSIIIAHDVNKPIRKYALASLYDFNMGIVYPAFGDNTRFEMKPVMLQMIQNASQFRGYLGE
DPHDHIKSFYSICFFFHLLGITQDELRLTLFPFTLKDDVKRWICRMKAAEITS