; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004792 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004792
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMental retardation GTPase activating protein
Genome locationchr03:11706941..11709046
RNA-Seq ExpressionPI0004792
SyntenyPI0004792
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039378.1 uncharacterized protein E6C27_scaffold64G001800 [Cucumis melo var. makuwa]3.3e-3357.86Show/hide
Query:  TPQRSTSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQ
        T  R  S+EIDPSTYSFTTAL+ALQ RSSYNSWESLSPEGFALNSK                           ARSFR FRTR+ MSAPLVYS N +Q+Q
Subjt:  TPQRSTSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQ

Query:  E---------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE
        E               +P+KKM+GMRTKDVGT++TPPDRS TS SP STPPIK++S KE
Subjt:  E---------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE

XP_004141499.1 uncharacterized protein LOC101213588 isoform X1 [Cucumis sativus]3.6e-3255.95Show/hide
Query:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE---
        S  +EIDPSTYSFTTAL+ALQ RSSYNSWESLSPEGFALNSK                           ARSFR FRTR+ MSAPLVYS N +Q+QE   
Subjt:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE---

Query:  ------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKS----KKEERNKPKSYN
                    +P+KKMEGMRTKDVGT++TPPDRS TS SP STPPIK++S     KE+    KSY+
Subjt:  ------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKS----KKEERNKPKSYN

XP_008459461.1 PREDICTED: uncharacterized protein LOC103498590 isoform X2 [Cucumis melo]2.1e-3258.06Show/hide
Query:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE---
        S  +EIDPSTYSFTTAL+ALQ RSSYNSWESLSPEGFALNSK                           ARSFR FRTR+ MSAPLVYS N +Q+QE   
Subjt:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE---

Query:  ------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE
                    +P+KKM+GMRTKDVGT++TPPDRS TS SP STPPIK++S KE
Subjt:  ------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE

XP_016902450.1 PREDICTED: uncharacterized protein LOC103498590 isoform X1 [Cucumis melo]2.1e-3258.55Show/hide
Query:  NEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE------
        +EIDPSTYSFTTAL+ALQ RSSYNSWESLSPEGFALNSK                           ARSFR FRTR+ MSAPLVYS N +Q+QE      
Subjt:  NEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE------

Query:  ---------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE
                 +P+KKM+GMRTKDVGT++TPPDRS TS SP STPPIK++S KE
Subjt:  ---------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE

XP_031741937.1 uncharacterized protein LOC101213588 isoform X2 [Cucumis sativus]3.6e-3255.95Show/hide
Query:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE---
        S  +EIDPSTYSFTTAL+ALQ RSSYNSWESLSPEGFALNSK                           ARSFR FRTR+ MSAPLVYS N +Q+QE   
Subjt:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE---

Query:  ------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKS----KKEERNKPKSYN
                    +P+KKMEGMRTKDVGT++TPPDRS TS SP STPPIK++S     KE+    KSY+
Subjt:  ------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKS----KKEERNKPKSYN

TrEMBL top hitse value%identityAlignment
A0A0A0KSN4 Uncharacterized protein1.8e-3255.95Show/hide
Query:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE---
        S  +EIDPSTYSFTTAL+ALQ RSSYNSWESLSPEGFALNSK                           ARSFR FRTR+ MSAPLVYS N +Q+QE   
Subjt:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE---

Query:  ------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKS----KKEERNKPKSYN
                    +P+KKMEGMRTKDVGT++TPPDRS TS SP STPPIK++S     KE+    KSY+
Subjt:  ------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKS----KKEERNKPKSYN

A0A1S3CBG4 uncharacterized protein LOC103498590 isoform X21.0e-3258.06Show/hide
Query:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE---
        S  +EIDPSTYSFTTAL+ALQ RSSYNSWESLSPEGFALNSK                           ARSFR FRTR+ MSAPLVYS N +Q+QE   
Subjt:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE---

Query:  ------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE
                    +P+KKM+GMRTKDVGT++TPPDRS TS SP STPPIK++S KE
Subjt:  ------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE

A0A1S4E398 uncharacterized protein LOC103498590 isoform X11.0e-3258.55Show/hide
Query:  NEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE------
        +EIDPSTYSFTTAL+ALQ RSSYNSWESLSPEGFALNSK                           ARSFR FRTR+ MSAPLVYS N +Q+QE      
Subjt:  NEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE------

Query:  ---------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE
                 +P+KKM+GMRTKDVGT++TPPDRS TS SP STPPIK++S KE
Subjt:  ---------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE

A0A5A7T930 Uncharacterized protein1.6e-3357.86Show/hide
Query:  TPQRSTSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQ
        T  R  S+EIDPSTYSFTTAL+ALQ RSSYNSWESLSPEGFALNSK                           ARSFR FRTR+ MSAPLVYS N +Q+Q
Subjt:  TPQRSTSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQ

Query:  E---------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE
        E               +P+KKM+GMRTKDVGT++TPPDRS TS SP STPPIK++S KE
Subjt:  E---------------MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKSKKE

A0A6J1JS77 uncharacterized protein LOC111489313 isoform X22.2e-2755.9Show/hide
Query:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLS-PEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE--
        S  +EIDPSTYSFTTAL+ALQ RS+YNSWESLS PEG ALNSK                           ARSFR  RTR+ MSAPLVYS N  QLQE  
Subjt:  STSNEIDPSTYSFTTALQALQGRSSYNSWESLS-PEGFALNSK--------------------------CARSFRKFRTRMNMSAPLVYSINCKQLQE--

Query:  -----MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKS----KKEERNKPKSYN
             +P+KK+EGM TKDVGT++TPPDRS TS SP STPPIK++S     KEE     SY+
Subjt:  -----MPKKKMEGMRTKDVGTKNTPPDRSLTSRSPDSTPPIKDKS----KKEERNKPKSYN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02500.1 unknown protein2.8e-0633.01Show/hide
Query:  ATTPQRSTSNEIDPSTYSFTTALQALQGRSSY-NSWESLSPEGFALNSKCARSFRKFRTRMNMSAPLVYSINCKQLQEMPKKKMEGMRTKDVGTKNTPPD
        A++P  S  +EIDPS YSF++AL+ALQ +S Y  +W+ L PEG  LNSK   + +     ++   PL     C   + +  +    + TK       P +
Subjt:  ATTPQRSTSNEIDPSTYSFTTALQALQGRSSY-NSWESLSPEGFALNSKCARSFRKFRTRMNMSAPLVYSINCKQLQEMPKKKMEGMRTKDVGTKNTPPD

Query:  RSL
         +L
Subjt:  RSL

AT5G16030.1 unknown protein9.3e-1035.09Show/hide
Query:  ATTPQRSTSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK-------------------C----ARSFRKFRTRMNMSAPLVY---------
        A++P  +   EIDPSTYSFT AL+ALQ ++ YN+ E L+ EGFALNSK                   C      S R FR    MSAPL +         
Subjt:  ATTPQRSTSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK-------------------C----ARSFRKFRTRMNMSAPLVY---------

Query:  --------SINCKQLQE-----------MPKKKMEGMRTKDVGTKNTPP-DRSLTSRSPDSTPPIKDKSKK
                + N + + E           + +KK+ GM+ +DVG ++T   D S  S SP  TPPI ++S K
Subjt:  --------SINCKQLQE-----------MPKKKMEGMRTKDVGTKNTPP-DRSLTSRSPDSTPPIKDKSKK

AT5G16030.2 unknown protein2.3e-0834.88Show/hide
Query:  ATTPQRSTSNEIDPSTYSFTTALQ-ALQGRSSYNSWESLSPEGFALNSK-------------------C----ARSFRKFRTRMNMSAPLVY--------
        A++P  +   EIDPSTYSFT AL+ ALQ ++ YN+ E L+ EGFALNSK                   C      S R FR    MSAPL +        
Subjt:  ATTPQRSTSNEIDPSTYSFTTALQ-ALQGRSSYNSWESLSPEGFALNSK-------------------C----ARSFRKFRTRMNMSAPLVY--------

Query:  ---------SINCKQLQE-----------MPKKKMEGMRTKDVGTKNTPP-DRSLTSRSPDSTPPIKDKSKK
                 + N + + E           + +KK+ GM+ +DVG ++T   D S  S SP  TPPI ++S K
Subjt:  ---------SINCKQLQE-----------MPKKKMEGMRTKDVGTKNTPP-DRSLTSRSPDSTPPIKDKSKK

AT5G16030.3 unknown protein7.9e-0933.52Show/hide
Query:  ATTPQRSTSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK-------------------C----ARSFRKFRTRMNMSAPLVY---------
        A++P  +   EIDPSTYSFT AL+ALQ ++ YN+ E L+ EGFALNSK                   C      S R FR    MSAPL +         
Subjt:  ATTPQRSTSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSK-------------------C----ARSFRKFRTRMNMSAPLVY---------

Query:  --------SINCKQLQE-------------------MPKKKMEGMRTKDVGTKNTPP-DRSLTSRSPDSTPPIKDKSKK
                + N + + E                   + +KK+ GM+ +DVG ++T   D S  S SP  TPPI ++S K
Subjt:  --------SINCKQLQE-------------------MPKKKMEGMRTKDVGTKNTPP-DRSLTSRSPDSTPPIKDKSKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTACTACTCCGCAGAGATCTACTTCAAATGAAATTGACCCATCAACCTATTCTTTCACTACTGCCCTTCAAGCATTGCAAGGTAGATCAAGTTATAATAGTTG
GGAAAGTTTGTCACCAGAGGGATTTGCTTTGAACTCAAAATGTGCAAGGTCATTCAGAAAATTTAGAACTAGGATGAACATGTCTGCTCCTTTAGTTTATTCTATAAATT
GCAAACAACTCCAAGAAATGCCAAAAAAGAAAATGGAAGGGATGAGAACCAAGGATGTTGGAACTAAAAACACACCACCTGATAGAAGTTTGACAAGTCGTAGTCCGGAT
TCGACTCCTCCCATTAAAGATAAATCTAAGAAAGAAGAAAGGAATAAACCAAAGTCGTATAATGAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTACTACTCCGCAGAGATCTACTTCAAATGAAATTGACCCATCAACCTATTCTTTCACTACTGCCCTTCAAGCATTGCAAGGTAGATCAAGTTATAATAGTTG
GGAAAGTTTGTCACCAGAGGGATTTGCTTTGAACTCAAAATGTGCAAGGTCATTCAGAAAATTTAGAACTAGGATGAACATGTCTGCTCCTTTAGTTTATTCTATAAATT
GCAAACAACTCCAAGAAATGCCAAAAAAGAAAATGGAAGGGATGAGAACCAAGGATGTTGGAACTAAAAACACACCACCTGATAGAAGTTTGACAAGTCGTAGTCCGGAT
TCGACTCCTCCCATTAAAGATAAATCTAAGAAAGAAGAAAGGAATAAACCAAAGTCGTATAATGAGGAATAA
Protein sequenceShow/hide protein sequence
MGATTPQRSTSNEIDPSTYSFTTALQALQGRSSYNSWESLSPEGFALNSKCARSFRKFRTRMNMSAPLVYSINCKQLQEMPKKKMEGMRTKDVGTKNTPPDRSLTSRSPD
STPPIKDKSKKEERNKPKSYNEE