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PI0004814 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004814
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr10:13634197..13634406
RNA-Seq ExpressionPI0004814
SyntenyPI0004814
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.7e-1571.21Show/hide
Query:  MDTNEAVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDVRVVEHIDFLL
        MDT+ A+ NI NIC MKHLQ YQI KST+KNQR K++ +NIE +V+ +NQLEIDDVRVVEHIDFLL
Subjt:  MDTNEAVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDVRVVEHIDFLL

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.6e-1571.88Show/hide
Query:  AVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDVRVVEHIDFLLIFK
        A+ NITNIC MKHLQ YQI KST+KNQR K++ +NIEF+VN DNQL+ID+V+VVEHIDFLL  K
Subjt:  AVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDVRVVEHIDFLLIFK

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.0e-1169.64Show/hide
Query:  MDTNEAVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDV
        MD + A+ NITNIC MKHLQ YQI KST+KNQR K++ +NIEF+V+ DNQLEIDDV
Subjt:  MDTNEAVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDV

TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein1.7e-1571.88Show/hide
Query:  AVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDVRVVEHIDFLLIFK
        A+ NITNIC MKHLQ YQI KST+KNQR K++ +NIEF+VN DNQL+ID+V+VVEHIDFLL  K
Subjt:  AVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDVRVVEHIDFLLIFK

A0A5A7TI03 Stress-response A/B barrel domain-containing protein8.9e-0469.44Show/hide
Query:  YQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDVR
        YQI KST+KNQR K++ +NIEFKV+ DNQLEIDD++
Subjt:  YQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDVR

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.4e-1169.64Show/hide
Query:  MDTNEAVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDV
        MD + A+ NITNIC MKHLQ YQI KST+KNQR K++ +NIEF+V+ DNQLEIDDV
Subjt:  MDTNEAVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDV

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.3e-1571.21Show/hide
Query:  MDTNEAVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDVRVVEHIDFLL
        MDT+ A+ NI NIC MKHLQ YQI KST+KNQR K++ +NIE +V+ +NQLEIDDVRVVEHIDFLL
Subjt:  MDTNEAVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDVRVVEHIDFLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACAAATGAGGCTGTAGAAAACATAACAAATATCTGTACTATGAAGCACCTGCAGAGTTATCAGATTCACAAGAGTACCCACAAGAACCAGAGAATCAAGAAAAG
CTGGAGCAATATAGAGTTCAAAGTCAACAACGACAACCAACTCGAAATCGACGATGTTCGAGTTGTGGAACACATTGATTTTCTTTTAATTTTTAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACACAAATGAGGCTGTAGAAAACATAACAAATATCTGTACTATGAAGCACCTGCAGAGTTATCAGATTCACAAGAGTACCCACAAGAACCAGAGAATCAAGAAAAG
CTGGAGCAATATAGAGTTCAAAGTCAACAACGACAACCAACTCGAAATCGACGATGTTCGAGTTGTGGAACACATTGATTTTCTTTTAATTTTTAAATAG
Protein sequenceShow/hide protein sequence
MDTNEAVENITNICTMKHLQSYQIHKSTHKNQRIKKSWSNIEFKVNNDNQLEIDDVRVVEHIDFLLIFK