CuGenDBv2

Gene ID	PI0004825
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Anaphase-promoting complex subunit 4
Genome location	chr02:17210316..17214533
RNA-Seq Expression	PI0004825
Synteny	PI0004825
Gene Ontology terms	GO:0009793 - embryo development ending in seed dormancy (biological process) GO:0031145 - anaphase-promoting complex-dependent catabolic process (biological process) GO:0045842 - positive regulation of mitotic metaphase/anaphase transition (biological process) GO:0048481 - plant ovule development (biological process) GO:0051301 - cell division (biological process) GO:0070979 - protein K11-linked ubiquitination (biological process) GO:0005680 - anaphase-promoting complex (cellular component) GO:0034399 - nuclear periphery (cellular component)
InterPro domains	IPR024789 - Anaphase-promoting complex subunit 4

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0046621.1 anaphase-promoting complex subunit 4 [Cucumis melo var. makuwa]

2.8e-120

96.6

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Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFKEAFLMPF TISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
        ED+SSSEAVLISIPDGSQCVDLSLYKDGQIVLLLN++ASTSESSVGSYMMVV+VDDLPFVS+PRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVI P
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
        LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
Subjt:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE

KAG6603721.1 Anaphase-promoting complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-109

87.66

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Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFKEAFLMPFSTISRKILCED++SLFP  SSSSCLSS VPLSVSYYEDSSEVV ADLSC+QKFIDYISF+VPDDSF +IANC+GI R FIHDQSCS+
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
        EDYSS EAVLISIPDGS+CVDLSLYKDGQIVLLLN++ASTSESSVGSYMM++QVD+LPFVSMPRSPCL NWK+ QLKD VVPLQMENEKVRNI HAVIPP
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
        LAVSASRGVACVFAARKRALVYILEEDEDE SD E
Subjt:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE

TYK00082.1 anaphase-promoting complex subunit 4 [Cucumis melo var. makuwa]

1.4e-119

96.17

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Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFKEAFLMPF TISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
        ED+SSSEAVLISIPDG QCVDLSLYKDGQIVLLLN++AST ESSVGSYMMVVQVDDLPFVS+PRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVI P
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
        LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
Subjt:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE

XP_008463366.1 PREDICTED: anaphase-promoting complex subunit 4 [Cucumis melo]

1.1e-119

96.17

Show/hide

Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFKEAFLMPF TISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
        ED+SSSEAVLISIPDGSQCVDLSLYKDGQIVLLLN++ASTSESSVGSYMMVV+VDDLPFVS+PRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVI P
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
        LAVSASRGVACVFAARKRALVYILEE+EDEVSDAE
Subjt:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE

XP_011656470.1 anaphase-promoting complex subunit 4 [Cucumis sativus]

7.4e-121

97.02

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Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFK+AFLMPF TISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVV ADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
        ED+SSSEAVLISIPDGSQCVDLSLYKDGQIVLLLN++ASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
        LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
Subjt:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWY6 Uncharacterized protein

3.6e-121

97.02

Show/hide

Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFK+AFLMPF TISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVV ADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
        ED+SSSEAVLISIPDGSQCVDLSLYKDGQIVLLLN++ASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
        LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
Subjt:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE

A0A1S3CJ41 Anaphase-promoting complex subunit 4

5.2e-120

96.17

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Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFKEAFLMPF TISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
        ED+SSSEAVLISIPDGSQCVDLSLYKDGQIVLLLN++ASTSESSVGSYMMVV+VDDLPFVS+PRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVI P
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
        LAVSASRGVACVFAARKRALVYILEE+EDEVSDAE
Subjt:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE

A0A5A7TZ68 Anaphase-promoting complex subunit 4

1.4e-120

96.6

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Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFKEAFLMPF TISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
        ED+SSSEAVLISIPDGSQCVDLSLYKDGQIVLLLN++ASTSESSVGSYMMVV+VDDLPFVS+PRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVI P
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
        LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
Subjt:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE

A0A5D3BMY3 Anaphase-promoting complex subunit 4

6.8e-120

96.17

Show/hide

Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFKEAFLMPF TISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
        ED+SSSEAVLISIPDG QCVDLSLYKDGQIVLLLN++AST ESSVGSYMMVVQVDDLPFVS+PRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVI P
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
        LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
Subjt:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE

A0A6J1IJW1 Anaphase-promoting complex subunit 4

2.4e-109

87.23

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Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFKEAFLMPFSTISRKILCED++SLFP  SSSSCLSS VPLSVSYYEDSSE V ADLSC+QKFIDYISF+VPDDSF +IANC+GI R FIHDQSCSN
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
        EDYSS EAVLISIPDGS+CVDLSLYKDGQIVLLLN++ASTSESSVGSYMM++Q D+LPFVSMPRSPCL NWK+ QLKD VVPLQMENEKVRNI HAVIPP
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE
        LAVSASRGVACVFAARKRALVYILEEDEDE SD E
Subjt:  LAVSASRGVACVFAARKRALVYILEEDEDEVSDAE

SwissProt top hits

e value

%identity

Alignment

O65418 Anaphase-promoting complex subunit 4

1.8e-61

53.42

Show/hide

Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFK AF MPF+TISRKI C  ++ L P   S++   + +P+S+S+Y++    +  D  C+  + DYISF+VPD++F EI+NC+GI + +  + +   
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
          Y+S EAVL+S+P+G  CVDLSLYKD ++VLLLNK+ + SE S  + MMVVQ  DL F+S+  S  L+ W++  LK ++V L+MENEKVR + H+VI P
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDED-EVSD
        LAVSASRGVACVFA R+RALVYILEEDED E+SD
Subjt:  LAVSASRGVACVFAARKRALVYILEEDED-EVSD

Arabidopsis top hits

e value

%identity

Alignment

AT4G21530.1 Transducin/WD40 repeat-like superfamily protein

1.3e-62

53.42

Show/hide

Query:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN
        ME SFK AF MPF+TISRKI C  ++ L P   S++   + +P+S+S+Y++    +  D  C+  + DYISF+VPD++F EI+NC+GI + +  + +   
Subjt:  MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSN

Query:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP
          Y+S EAVL+S+P+G  CVDLSLYKD ++VLLLNK+ + SE S  + MMVVQ  DL F+S+  S  L+ W++  LK ++V L+MENEKVR + H+VI P
Subjt:  EDYSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPP

Query:  LAVSASRGVACVFAARKRALVYILEEDED-EVSD
        LAVSASRGVACVFA R+RALVYILEEDED E+SD
Subjt:  LAVSASRGVACVFAARKRALVYILEEDED-EVSD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAATTTAGTTTTAAGGAAGCTTTTCTTATGCCCTTTAGTACAATCTCAAGAAAAATACTTTGTGAAGATATAATATCCCTATTTCCCTTTCCATCCTCGTCAAGTTG
CCTGTCTTCACATGTTCCTCTCTCCGTTTCATACTACGAGGATTCCTCTGAAGTTGTTCCTGCCGATCTGAGTTGTGAGCAGAAGTTTATAGATTATATATCTTTCAGAG
TCCCAGATGATTCTTTTGCAGAAATTGCAAATTGTGTAGGCATAGTCAGGAGATTCATCCATGACCAGAGCTGCTCAAACGAGGACTATTCCTCATCTGAAGCAGTCTTA
ATATCTATTCCTGATGGTTCTCAGTGTGTTGATCTTTCTTTATACAAGGATGGACAGATTGTTTTGTTATTAAATAAAAGTGCTTCTACTTCTGAAAGCTCTGTTGGTTC
CTATATGATGGTTGTGCAAGTAGATGACCTTCCGTTTGTATCTATGCCAAGATCACCCTGTCTGGACAATTGGAAGATCCTTCAACTCAAGGACAATGTTGTCCCTCTGC
AAATGGAGAATGAGAAAGTTCGCAACATTTCTCACGCTGTCATTCCTCCTTTGGCTGTTAGTGCATCAAGAGGAGTGGCTTGCGTTTTTGCTGCGAGAAAGCGAGCGTTG
GTCTACATCCTAGAGGAAGATGAAGATGAAGTATCAGATGCTGAGTGA

mRNA sequence

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Protein sequence

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MEFSFKEAFLMPFSTISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDYSSSEAVL
ISIPDGSQCVDLSLYKDGQIVLLLNKSASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVIPPLAVSASRGVACVFAARKRAL
VYILEEDEDEVSDAE

PI0004825 (gene) of Melon (PI 482460) v1 genome