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PI0004873 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004873
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationchr12:2910478..2911927
RNA-Seq ExpressionPI0004873
SyntenyPI0004873
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152507.2 protein NOI4 [Cucumis sativus]2.0e-3596.1Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQDKGR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTGTAANM VPQERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_008439256.1 PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]2.7e-3594.81Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG AANM VP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_008439265.1 PREDICTED: RPM1-interacting protein 4 isoform X2 [Cucumis melo]3.2e-3392Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG
        + D+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG AANM VP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_038894676.1 protein NOI4 isoform X1 [Benincasa hispida]3.8e-3493.51Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAAN  VPQ+ +EPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_038894677.1 protein NOI4 isoform X2 [Benincasa hispida]3.6e-3292.21Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAAN  VPQ+ +EPVFNNESYPQYPPP KRWFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG

TrEMBL top hitse value%identityAlignment
A0A0A0LRE5 AvrRpt-cleavage domain-containing protein9.8e-3696.1Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQDKGR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTGTAANM VPQERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A1S3AYE6 RPM1-interacting protein 4 isoform X21.6e-3392Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG
        + D+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG AANM VP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A1S3AZ04 RPM1-interacting protein 4 isoform X11.3e-3594.81Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG AANM VP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A6J1GRZ4 RPM1-interacting protein 4-like2.1e-3084.42Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MA QDKGRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  Q  NEP +NNES+PQ PPPKKRWFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A6J1K4F5 RPM1-interacting protein 4-like1.8e-2983.12Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MA QDKG PLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  Q  NEP +NNES+PQ PPPKKRWFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG

SwissProt top hitse value%identityAlignment
O22633 Protein NOI44.9e-1663.01Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNE-PVFNNESYPQYPPPKKRWFCC
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT G   +   P + +E  V +    P  P PKK W CC
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNE-PVFNNESYPQYPPPKKRWFCC

Q8GYN5 RPM1-interacting protein 47.8e-0655.26Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT
        S +K   +PKFG+WD NNP+SA+G+T IFNK R E+ +
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.6e-1759.72Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCC
        DKGRPLPKFGEWDVN+P+SAEGFTVIFNKARNEKK  G + +      ++EP +N         P K+WFCC
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCC

AT3G48450.1 RPM1-interacting protein 4 (RIN4) family protein7.7e-1750.57Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAA----NMVVPQERNEPVFNNES--------YPQYPPPKKRWFC
        MA+ ++ RPLPKFGEWD  NP SAEGFTVIFNKAR++KKT  TA     ++V P    EP  NN +        + Q P  KK+W C
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAA----NMVVPQERNEPVFNNES--------YPQYPPPKKRWFC

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.2e-1460Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNE-PVFNNESYPQYPPPKKR
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT G   +   P + +E  V +    P  P P K+
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNE-PVFNNESYPQYPPPKKR

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.7e-1762.16Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNE-PVFNNESYPQYPPPKKRWFCC
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT G   +   P + +E  V +    P  P PKK W CC
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNE-PVFNNESYPQYPPPKKRWFCC

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein7.0e-1857.14Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT---TGTAANMVVPQERNE-PVFNNESYPQYPPPKKRWFC
        +++KG+PLPKFGEWDVNNPASAEGFTVIF+KA +EKKT   +G   N +V  +RN+    NN    Q P  K +WFC
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT---TGTAANMVVPQERNE-PVFNNESYPQYPPPKKRWFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGCAGGACAAGGGTCGTCCATTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGA
GAAGAAGACCACTGGAACTGCTGCCAATATGGTGGTTCCTCAAGAAAGAAATGAACCTGTCTTCAACAATGAGAGTTACCCTCAGTATCCTCCGCCGAAGAAGAGGTGGT
TTTGCTGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGCAGGACAAGGGTCGTCCATTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGA
GAAGAAGACCACTGGAACTGCTGCCAATATGGTGGTTCCTCAAGAAAGAAATGAACCTGTCTTCAACAATGAGAGTTACCCTCAGTATCCTCCGCCGAAGAAGAGGTGGT
TTTGCTGTGGTTGA
Protein sequenceShow/hide protein sequence
MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVVPQERNEPVFNNESYPQYPPPKKRWFCCG