| GenBank top hits | e value | %identity | Alignment |
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| KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.9e-103 | 59.25 | Show/hide |
Query: KFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKTSLDHLR
+++E+LEDW SKNHQ+ITWLGNTSIP IHTQFDAFD AK LWDFL RFQ+IGLA YY+LH+ LV+ NQE GQ NEYLAT Q +WTQLDQ K S DH+R
Subjt: KFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKTSLDHLR
Query: LIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGHILDNCP
LIKVL+GLRPEY+ V A LLHR+ LPSLD AVQEILF+E RLG++SS+ S+VAL + R + K+H HKF +C IE YCHK GHILDNCP
Subjt: LIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGHILDNCP
Query: TRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPSVHSTNG
TRPPRPPG++ K K S GS S+V A T T SLQ++DL DLLKQV L V MTS+++LLS PV+SLP +HS +G
Subjt: TRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPSVHSTNG
Query: KHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
M +SH+GTV+T TI LSN +H+PN++F LA VGQLCDL LT++F
Subjt: KHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
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| KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-103 | 59.54 | Show/hide |
Query: KFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKTSLDHLR
+++E+LEDW SKNHQ+ITWLGNTSIP IHTQFDAFD AK LWDFL RFQ+IGLA YY+LH+ LV+ NQE GQ NEYLAT Q +WTQLDQ K S DH+R
Subjt: KFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKTSLDHLR
Query: LIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGHILDNCP
LIKVL+GLRPEY+SV A LLHR+ LPSLD AVQEILF+E RLG++SS+ S+VAL + R + K+H HKF +C IE YCHK GHILDNCP
Subjt: LIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGHILDNCP
Query: TRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPSVHSTNG
TRPPRPPG++ K K S GS S+V A T T SLQ++DL DLLKQV L V MTS+++LLS PV+SLP +HS +G
Subjt: TRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPSVHSTNG
Query: KHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
M +SH+GTV+T TI LSN +H+PN++F LA VGQLCDL LT++F
Subjt: KHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
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| KAA0053979.1 Integrase, catalytic core [Cucumis melo var. makuwa] | 5.4e-102 | 56.39 | Show/hide |
Query: HHQTYKKGSTEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVW
H+ +T ++ K++E+LEDW KNHQ+ITWLGNTSIP IHTQFDAFD AK LWDFL RFQ+IGLA YY+LH+ LV+ NQE GQ NEYLAT Q +W
Subjt: HHQTYKKGSTEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVW
Query: TQLDQTKTSLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQSRIPVLRLTQHFA-----KIHRHKFRSCRPI
TQL+Q K SLDH+ LIKVL+GLRPEY+SVYA LLHR+ LPSLDVA+Q+ILF+E RL + SS+ S+VAL + L+ T + K+H H F +C I
Subjt: TQLDQTKTSLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQSRIPVLRLTQHFA-----KIHRHKFRSCRPI
Query: EYMYCHKPGHILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVADTPS--STPS-LQISDLQDLLKQVPLGSLIQLVVIMTSNLTL-----------LSPS
E YCHK GHILD+CPTRPPRPPG++ K K S G+ S+V A TPS + PS Q++DL DLLKQV + L V + ++ L LS
Subjt: EYMYCHKPGHILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVADTPS--STPS-LQISDLQDLLKQVPLGSLIQLVVIMTSNLTL-----------LSPS
Query: TPVKSLPSVHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
PV+SLP +HST G M +SH+GTV+T TI LSN +H+PN++F LAFVGQLCD+ LT++F
Subjt: TPVKSLPSVHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
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| KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.4e-104 | 58.81 | Show/hide |
Query: STEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKT
++ +N +++E+LEDW SKNHQ+ITWLGNTSIP IHTQFDAFD AK LWDFL RFQ+IGLA YY+LH+ LV+ NQE GQ NEYLAT Q +WTQLDQ K
Subjt: STEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKT
Query: SLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGH
S DH+RLIKVL+GLRPEY+ V A LLHR+SLPSLD AVQEILF+E RLG++SS+ S+VAL + R + K+H HKF +C IE YCHK GH
Subjt: SLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGH
Query: ILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPS
ILDNCPTRPPRPPG++ K K GS S+V A T T SLQ++DL DLLKQV L V MTS+++LLS TPV+SLP
Subjt: ILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPS
Query: VHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
+HS +G M +SH+GTV+T TI LSN +H+PN++F LA VGQLCDL LT++F
Subjt: VHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
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| KAA0064060.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.6e-93 | 53.95 | Show/hide |
Query: KGSTEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQT
K ED+GKF+E+LE+W SKNHQ+ITWL NTSIP IHTQFDAF+ AK LWDFL RF+++GLA YY+LH LVN NQE GQ NEYL Q +WTQLDQ
Subjt: KGSTEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQT
Query: KTSLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQSRIPVLRLTQHF---AKIHRHKFRSCRPIEYMYCHKP
S DHLRLIKVL+GLRPEY+SV A LLHRS LPSLD A+QEILF+E RLG+ S S+V L S + F K+ HKF C IE YCHKP
Subjt: KTSLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQSRIPVLRLTQHF---AKIHRHKFRSCRPIEYMYCHKP
Query: GHILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVA--DTPSSTPSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSL
GHILDNCP +PP+P Y+ + K + P + +V A D P +TP QISDLQ LL Q+ S LVV MTSN +L++ +P KSL
Subjt: GHILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVA--DTPSSTPSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSL
Query: PSVHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
P +++ +G M ++H+GTV+T ++NL + + +PN++F L VGQLCDL LTV F
Subjt: PSVHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-103 | 59.25 | Show/hide |
Query: KFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKTSLDHLR
+++E+LEDW SKNHQ+ITWLGNTSIP IHTQFDAFD AK LWDFL RFQ+IGLA YY+LH+ LV+ NQE GQ NEYLAT Q +WTQLDQ K S DH+R
Subjt: KFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKTSLDHLR
Query: LIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGHILDNCP
LIKVL+GLRPEY+ V A LLHR+ LPSLD AVQEILF+E RLG++SS+ S+VAL + R + K+H HKF +C IE YCHK GHILDNCP
Subjt: LIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGHILDNCP
Query: TRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPSVHSTNG
TRPPRPPG++ K K S GS S+V A T T SLQ++DL DLLKQV L V MTS+++LLS PV+SLP +HS +G
Subjt: TRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPSVHSTNG
Query: KHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
M +SH+GTV+T TI LSN +H+PN++F LA VGQLCDL LT++F
Subjt: KHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
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| A0A5A7UKE6 Integrase, catalytic core | 2.6e-102 | 56.39 | Show/hide |
Query: HHQTYKKGSTEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVW
H+ +T ++ K++E+LEDW KNHQ+ITWLGNTSIP IHTQFDAFD AK LWDFL RFQ+IGLA YY+LH+ LV+ NQE GQ NEYLAT Q +W
Subjt: HHQTYKKGSTEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVW
Query: TQLDQTKTSLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQSRIPVLRLTQHFA-----KIHRHKFRSCRPI
TQL+Q K SLDH+ LIKVL+GLRPEY+SVYA LLHR+ LPSLDVA+Q+ILF+E RL + SS+ S+VAL + L+ T + K+H H F +C I
Subjt: TQLDQTKTSLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQSRIPVLRLTQHFA-----KIHRHKFRSCRPI
Query: EYMYCHKPGHILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVADTPS--STPS-LQISDLQDLLKQVPLGSLIQLVVIMTSNLTL-----------LSPS
E YCHK GHILD+CPTRPPRPPG++ K K S G+ S+V A TPS + PS Q++DL DLLKQV + L V + ++ L LS
Subjt: EYMYCHKPGHILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVADTPS--STPS-LQISDLQDLLKQVPLGSLIQLVVIMTSNLTL-----------LSPS
Query: TPVKSLPSVHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
PV+SLP +HST G M +SH+GTV+T TI LSN +H+PN++F LAFVGQLCD+ LT++F
Subjt: TPVKSLPSVHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
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| A0A5A7UVX4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-104 | 58.81 | Show/hide |
Query: STEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKT
++ +N +++E+LEDW SKNHQ+ITWLGNTSIP IHTQFDAFD AK LWDFL RFQ+IGLA YY+LH+ LV+ NQE GQ NEYLAT Q +WTQLDQ K
Subjt: STEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKT
Query: SLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGH
S DH+RLIKVL+GLRPEY+ V A LLHR+SLPSLD AVQEILF+E RLG++SS+ S+VAL + R + K+H HKF +C IE YCHK GH
Subjt: SLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGH
Query: ILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPS
ILDNCPTRPPRPPG++ K K GS S+V A T T SLQ++DL DLLKQV L V MTS+++LLS TPV+SLP
Subjt: ILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPS
Query: VHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
+HS +G M +SH+GTV+T TI LSN +H+PN++F LA VGQLCDL LT++F
Subjt: VHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
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| A0A5A7V9Z8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.7e-94 | 53.95 | Show/hide |
Query: KGSTEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQT
K ED+GKF+E+LE+W SKNHQ+ITWL NTSIP IHTQFDAF+ AK LWDFL RF+++GLA YY+LH LVN NQE GQ NEYL Q +WTQLDQ
Subjt: KGSTEDNGKFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQT
Query: KTSLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQSRIPVLRLTQHF---AKIHRHKFRSCRPIEYMYCHKP
S DHLRLIKVL+GLRPEY+SV A LLHRS LPSLD A+QEILF+E RLG+ S S+V L S + F K+ HKF C IE YCHKP
Subjt: KTSLDHLRLIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQSRIPVLRLTQHF---AKIHRHKFRSCRPIEYMYCHKP
Query: GHILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVA--DTPSSTPSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSL
GHILDNCP +PP+P Y+ + K + P + +V A D P +TP QISDLQ LL Q+ S LVV MTSN +L++ +P KSL
Subjt: GHILDNCPTRPPRPPGYTPKFKGSSHPGSFSLVVA--DTPSSTPSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSL
Query: PSVHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
P +++ +G M ++H+GTV+T ++NL + + +PN++F L VGQLCDL LTV F
Subjt: PSVHSTNGKHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
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| A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.2e-104 | 59.54 | Show/hide |
Query: KFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKTSLDHLR
+++E+LEDW SKNHQ+ITWLGNTSIP IHTQFDAFD AK LWDFL RFQ+IGLA YY+LH+ LV+ NQE GQ NEYLAT Q +WTQLDQ K S DH+R
Subjt: KFVEQLEDWYSKNHQLITWLGNTSIPTIHTQFDAFDIAKGLWDFLVARFQTIGLAQYYKLHTALVNTNQETGQPANEYLATFQYVWTQLDQTKTSLDHLR
Query: LIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGHILDNCP
LIKVL+GLRPEY+SV A LLHR+ LPSLD AVQEILF+E RLG++SS+ S+VAL + R + K+H HKF +C IE YCHK GHILDNCP
Subjt: LIKVLIGLRPEYKSVYATLLHRSSLPSLDVAVQEILFDENRLGLMSSMSSEVALQS---RIPVLRLTQHFAKIHRHKFRSCRPIEYMYCHKPGHILDNCP
Query: TRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPSVHSTNG
TRPPRPPG++ K K S GS S+V A T T SLQ++DL DLLKQV L V MTS+++LLS PV+SLP +HS +G
Subjt: TRPPRPPGYTPKFKGSSHPGSFSLVVADTPSST--PSLQISDLQDLLKQVPLGSLIQLVVI--------------MTSNLTLLSPSTPVKSLPSVHSTNG
Query: KHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
M +SH+GTV+T TI LSN +H+PN++F LA VGQLCDL LT++F
Subjt: KHMFVSHVGTVDTLTINLSNIFHIPNISFTLAFVGQLCDLDLTVLF
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