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PI0004938 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004938
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:22877183..22878029
RNA-Seq ExpressionPI0004938
SyntenyPI0004938
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.7e-9166.54Show/hide
Query:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP
        DWSDRVAHL+MRW N  RF A GP I+QFDMDVT+EYIHWYKNI++LYIT+PGAA+ HLRSNN R  +VADDPQQVLNICN+NE Y+ENIHYMYDVPIVP
Subjt:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP

Query:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR
        AP QRRR  VQEP +  EVD   +E+P +TQTQ+E  YVSP+MMMP FGT+YY    GQSS FG GYYNSK G SS++FG +YYDLG+D SSSYMH HGR
Subjt:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR

Query:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH
         R +HNEYLYYE P  V EQ                 E QQ +N E ++  RVQSRRRQPARNRRR GC TH
Subjt:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.0e-9166.54Show/hide
Query:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP
        DWSDRVAHL+MRW N  RF A GP I+QFDMDVT+EYI+WYKNI++LYIT+PGA + HLRSNN R  +VADDPQQVLNICN+NE Y+ENIHYMYDVPIVP
Subjt:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP

Query:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR
        AP QRRR  VQEP +  EVD   EE+P +TQTQ+E  YVSP+MMMP FGT+YY    GQSS FG GYYNS+ G SS++FG +YYDLG+D SSSYMH HGR
Subjt:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR

Query:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH
         R EHNEYLYYE P  V EQ                 E QQ +NQE ++  RVQSRRRQPARNRRR GC TH
Subjt:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.7e-9166.54Show/hide
Query:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP
        DWSDRVAHL+MRW N  RF A GP I+QFDMDVT+EYIHWYKNI++LYIT+PGAA+ HLRSNN R  +VADDPQQVLNICN+NE Y+ENIHYMYDVPIVP
Subjt:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP

Query:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR
        AP QRRR  VQEP +  EVD   +E+P +TQTQ+E  YVSP+MMMP FGT+YY    GQSS FG GYYNSK G SS++FG +YYDLG+D SSSYMH HGR
Subjt:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR

Query:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH
         R +HNEYLYYE P  V EQ                 E QQ +N E ++  RVQSRRRQPARNRRR GC TH
Subjt:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.5e-8764.98Show/hide
Query:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP
        DWSDRVAHL+MRW N  RF A GP I+QFDMDVT+EYIHWYKNI++LYIT+PGAA+ HLRSNN R  +VADD QQVLNICN+NE Y+ENIHYMYDVPIV 
Subjt:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP

Query:  APAQRRRAQVQEP-EFHEVDHRVEEMPHV--TQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRH
        AP Q+RR  VQEP +  EVD   EE+P +  TQTQ+E  YV P+MMMP FGT+YY    GQSS F  GYYNS+ G SS+NFG +YYDLG+D SSSYMH H
Subjt:  APAQRRRAQVQEP-EFHEVDHRVEEMPHV--TQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRH

Query:  GRDRREHNEYLYYEAPLVVLEQV-------------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH
        GR R EHNEYLYYE P  V EQ                    E QQ KNQE ++  RVQSRRRQPARNRRR GC TH
Subjt:  GRDRREHNEYLYYEAPLVVLEQV-------------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.2e-8563.14Show/hide
Query:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP
        DW DRVAHL+MRW N  RF A GP I+QFDMDVT+EYIHWYKNI++LYIT+PGAA+ HLRSNN+R  ++ADDPQQVLNICN+NE Y+ENIHYMYDVPIVP
Subjt:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP

Query:  APAQRRRAQVQE-PEFHEVDHRVEEMPHV--TQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRH
        AP QRRR  VQE  +  EVD   EE+P +  TQTQ+E  YVSP+MMMP FG +YY    GQSS FG GYYNS+ G SS++FG +YYDLG+D SSSYMH H
Subjt:  APAQRRRAQVQE-PEFHEVDHRVEEMPHV--TQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRH

Query:  GRDRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH
        GR R EHNEYLYY+ P  V EQ                 E QQ +N E ++  RVQ RRRQ A+NR+R GC TH
Subjt:  GRDRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein8.4e-9266.54Show/hide
Query:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP
        DWSDRVAHL+MRW N  RF A GP I+QFDMDVT+EYIHWYKNI++LYIT+PGAA+ HLRSNN R  +VADDPQQVLNICN+NE Y+ENIHYMYDVPIVP
Subjt:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP

Query:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR
        AP QRRR  VQEP +  EVD   +E+P +TQTQ+E  YVSP+MMMP FGT+YY    GQSS FG GYYNSK G SS++FG +YYDLG+D SSSYMH HGR
Subjt:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR

Query:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH
         R +HNEYLYYE P  V EQ                 E QQ +N E ++  RVQSRRRQPARNRRR GC TH
Subjt:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-9166.54Show/hide
Query:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP
        DWSDRVAHL+MRW N  RF A GP I+QFDMDVT+EYI+WYKNI++LYIT+PGA + HLRSNN R  +VADDPQQVLNICN+NE Y+ENIHYMYDVPIVP
Subjt:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP

Query:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR
        AP QRRR  VQEP +  EVD   EE+P +TQTQ+E  YVSP+MMMP FGT+YY    GQSS FG GYYNS+ G SS++FG +YYDLG+D SSSYMH HGR
Subjt:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR

Query:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH
         R EHNEYLYYE P  V EQ                 E QQ +NQE ++  RVQSRRRQPARNRRR GC TH
Subjt:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein8.4e-9266.54Show/hide
Query:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP
        DWSDRVAHL+MRW N  RF A GP I+QFDMDVT+EYIHWYKNI++LYIT+PGAA+ HLRSNN R  +VADDPQQVLNICN+NE Y+ENIHYMYDVPIVP
Subjt:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP

Query:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR
        AP QRRR  VQEP +  EVD   +E+P +TQTQ+E  YVSP+MMMP FGT+YY    GQSS FG GYYNSK G SS++FG +YYDLG+D SSSYMH HGR
Subjt:  APAQRRRAQVQEP-EFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGR

Query:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH
         R +HNEYLYYE P  V EQ                 E QQ +N E ++  RVQSRRRQPARNRRR GC TH
Subjt:  DRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH

A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.4e-8864.98Show/hide
Query:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP
        DWSDRVAHL+MRW N  RF A GP I+QFDMDVT+EYIHWYKNI++LYIT+PGAA+ HLRSNN R  +VADD QQVLNICN+NE Y+ENIHYMYDVPIV 
Subjt:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP

Query:  APAQRRRAQVQEP-EFHEVDHRVEEMPHV--TQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRH
        AP Q+RR  VQEP +  EVD   EE+P +  TQTQ+E  YV P+MMMP FGT+YY    GQSS F  GYYNS+ G SS+NFG +YYDLG+D SSSYMH H
Subjt:  APAQRRRAQVQEP-EFHEVDHRVEEMPHV--TQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRH

Query:  GRDRREHNEYLYYEAPLVVLEQV-------------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH
        GR R EHNEYLYYE P  V EQ                    E QQ KNQE ++  RVQSRRRQPARNRRR GC TH
Subjt:  GRDRREHNEYLYYEAPLVVLEQV-------------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-8563.14Show/hide
Query:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP
        DW DRVAHL+MRW N  RF A GP I+QFDMDVT+EYIHWYKNI++LYIT+PGAA+ HLRSNN+R  ++ADDPQQVLNICN+NE Y+ENIHYMYDVPIVP
Subjt:  DWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVP

Query:  APAQRRRAQVQE-PEFHEVDHRVEEMPHV--TQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRH
        AP QRRR  VQE  +  EVD   EE+P +  TQTQ+E  YVSP+MMMP FG +YY    GQSS FG GYYNS+ G SS++FG +YYDLG+D SSSYMH H
Subjt:  APAQRRRAQVQE-PEFHEVDHRVEEMPHV--TQTQNEAGYVSPMMMMPPFGTSYYP---GQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRH

Query:  GRDRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH
        GR R EHNEYLYY+ P  V EQ                 E QQ +N E ++  RVQ RRRQ A+NR+R GC TH
Subjt:  GRDRREHNEYLYYEAPLVVLEQV----------------ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGGATTGGTCGGATAGAGTTGCACATCTGATGATGCGATGGCTAAATCACATAAGATTTATTGCTATGGGGCCTACAATTGATCAATTTGATATGGATGTAAC
TGAGGAATACATCCACTGGTATAAAAATATTACAAGACTCTACATTACTAGACCGGGAGCAGCTGTGGATCATCTGAGATCGAACAATAGTAGACCTTGTGATGTGGCAG
ATGATCCACAACAGGTTCTTAATATATGCAACGAAAACGAGTGGTACATAGAGAATATACATTATATGTATGATGTACCCATTGTACCAGCACCAGCCCAAAGGAGACGT
GCTCAAGTGCAAGAGCCTGAGTTTCATGAGGTTGACCATCGCGTGGAAGAAATGCCTCATGTGACACAAACACAAAATGAAGCTGGTTATGTTAGTCCAATGATGATGAT
GCCACCCTTTGGTACGAGCTATTATCCTGGTCAATCGTCATACTTCGGATTAGGATATTACAATTCAAAGAACGGTTCATCATCGTCAAACTTTGGAATAGAATATTACG
ATTTAGGGACCGACCAATCATCTTCATACATGCATCGACATGGACGCGATCGTAGAGAGCATAATGAATATTTATACTATGAAGCACCTCTAGTGGTACTTGAACAAGTA
GAAAACCAACAATCAAAGAATCAAGAGGCACTAGAACACCCGAGAGTTCAGAGTCGACGGCGACAACCAGCTCGAAATCGGCGACGTTCGGGTTGTAGGACACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGGATTGGTCGGATAGAGTTGCACATCTGATGATGCGATGGCTAAATCACATAAGATTTATTGCTATGGGGCCTACAATTGATCAATTTGATATGGATGTAAC
TGAGGAATACATCCACTGGTATAAAAATATTACAAGACTCTACATTACTAGACCGGGAGCAGCTGTGGATCATCTGAGATCGAACAATAGTAGACCTTGTGATGTGGCAG
ATGATCCACAACAGGTTCTTAATATATGCAACGAAAACGAGTGGTACATAGAGAATATACATTATATGTATGATGTACCCATTGTACCAGCACCAGCCCAAAGGAGACGT
GCTCAAGTGCAAGAGCCTGAGTTTCATGAGGTTGACCATCGCGTGGAAGAAATGCCTCATGTGACACAAACACAAAATGAAGCTGGTTATGTTAGTCCAATGATGATGAT
GCCACCCTTTGGTACGAGCTATTATCCTGGTCAATCGTCATACTTCGGATTAGGATATTACAATTCAAAGAACGGTTCATCATCGTCAAACTTTGGAATAGAATATTACG
ATTTAGGGACCGACCAATCATCTTCATACATGCATCGACATGGACGCGATCGTAGAGAGCATAATGAATATTTATACTATGAAGCACCTCTAGTGGTACTTGAACAAGTA
GAAAACCAACAATCAAAGAATCAAGAGGCACTAGAACACCCGAGAGTTCAGAGTCGACGGCGACAACCAGCTCGAAATCGGCGACGTTCGGGTTGTAGGACACATTAG
Protein sequenceShow/hide protein sequence
MMEDWSDRVAHLMMRWLNHIRFIAMGPTIDQFDMDVTEEYIHWYKNITRLYITRPGAAVDHLRSNNSRPCDVADDPQQVLNICNENEWYIENIHYMYDVPIVPAPAQRRR
AQVQEPEFHEVDHRVEEMPHVTQTQNEAGYVSPMMMMPPFGTSYYPGQSSYFGLGYYNSKNGSSSSNFGIEYYDLGTDQSSSYMHRHGRDRREHNEYLYYEAPLVVLEQV
ENQQSKNQEALEHPRVQSRRRQPARNRRRSGCRTH