CuGenDBv2

Gene ID	PI0004952
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	NDR1/HIN1-like protein 13
Genome location	chr11:21264868..21265158
RNA-Seq Expression	PI0004952
Synteny	PI0004952
Gene Ontology terms	GO:0042026 - protein refolding (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

ADN34111.1 chaperonin-60 kDa protein [Cucumis melo subsp. melo]

2.5e-19

87.1

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Query:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST
        MKVTVES+GGEI+ ESV+SLKA VKSKA LPLEIKVETKVKVKMGWLKMPKVGLR HCDG T
Subjt:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST

KAA0059430.1 NDR1/HIN1-Like protein 3 [Cucumis melo var. makuwa]

1.3e-18

85.48

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Query:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST
        MKV VES+GGEI+ ESV+SLKA VKSKA LPLEIKVETKVKVKMGWLKMPKVGLR HCDG T
Subjt:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST

XP_008462352.1 PREDICTED: NDR1/HIN1-Like protein 3 [Cucumis melo]

2.5e-19

87.1

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Query:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST
        MKVTVES+GGEI+ ESV+SLKA VKSKA LPLEIKVETKVKVKMGWLKMPKVGLR HCDG T
Subjt:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST

XP_011659643.1 NDR1/HIN1-like protein 6 [Cucumis sativus]

1.1e-17

79.03

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Query:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST
        MKVTVES+GGEI+ ESV+SLKA VKSK+ LPLE+++ETKVKVKMGWLKMP+VGLRVHC+G T
Subjt:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST

XP_022953253.1 chaperonin CPN60-like 2, mitochondrial [Cucurbita moschata]

2.0e-16

80.65

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Query:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST
        MKVT  S GGEI+ E V+SLKA +KSKA LPLEIKVETKVKVKMGWLKMPKVGLRV CDG T
Subjt:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCP8 LEA_2 domain-containing protein

5.2e-18

79.03

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Query:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST
        MKVTVES+GGEI+ ESV+SLKA VKSK+ LPLE+++ETKVKVKMGWLKMP+VGLRVHC+G T
Subjt:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST

A0A1S3CHA5 NDR1/HIN1-Like protein 3

1.2e-19

87.1

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Query:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST
        MKVTVES+GGEI+ ESV+SLKA VKSKA LPLEIKVETKVKVKMGWLKMPKVGLR HCDG T
Subjt:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST

A0A5A7UWE0 NDR1/HIN1-Like protein 3

6.1e-19

85.48

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Query:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST
        MKV VES+GGEI+ ESV+SLKA VKSKA LPLEIKVETKVKVKMGWLKMPKVGLR HCDG T
Subjt:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST

A0A6J1GMW7 chaperonin CPN60-like 2, mitochondrial

9.8e-17

80.65

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Query:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST
        MKVT  S GGEI+ E V+SLKA +KSKA LPLEIKVETKVKVKMGWLKMPKVGLRV CDG T
Subjt:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST

E5GCB2 Chaperonin-60 kDa protein

1.2e-19

87.1

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Query:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST
        MKVTVES+GGEI+ ESV+SLKA VKSKA LPLEIKVETKVKVKMGWLKMPKVGLR HCDG T
Subjt:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGST

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

3.4e-06

36.05

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Query:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDG---STKTKQSCTSCTKTKRSCTMSKR
        ++ T+ S   E+D+ S   LK  +K+K  + ++I + +KVKVKMG LK PK G+RV C+G      T +  T+ T +   C +  R
Subjt:  MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDG---STKTKQSCTSCTKTKRSCTMSKR

Sequences

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CDS sequence

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ATGAAGGTGACGGTGGAAAGCAATGGTGGAGAGATCGACGACGAGTCGGTCAATTCGTTGAAGGCGATAGTGAAGAGCAAAGCTAGATTACCGTTGGAAATTAAGGTGGA
GACGAAAGTGAAGGTGAAAATGGGATGGTTGAAGATGCCGAAGGTTGGACTAAGGGTTCATTGTGATGGAAGTACCAAAACTAAACAATCTTGTACCTCTTGTACCAAAA
CTAAACGATCTTGTACCATGTCTAAACGATCTGGTACTATATCTAAACGATCTTGTACCAAATCTAAATGA

mRNA sequence

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Protein sequence

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MKVTVESNGGEIDDESVNSLKAIVKSKARLPLEIKVETKVKVKMGWLKMPKVGLRVHCDGSTKTKQSCTSCTKTKRSCTMSKRSGTISKRSCTKSK

PI0004952 (gene) of Melon (PI 482460) v1 genome