CuGenDBv2

Gene ID	PI0004962
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Protein FAM33A
Genome location	chr07:23836961..23841097
RNA-Seq Expression	PI0004962
Synteny	PI0004962
Gene Ontology terms	GO:0000278 - mitotic cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000940 - condensed chromosome outer kinetochore (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0005876 - spindle microtubule (cellular component) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR026762 - Spindle and kinetochore-associated protein 2 IPR042091 - Ska2, N-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6591515.1 hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia]

4.0e-70

88.46

Show/hide

Query:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA
        MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQ+YP+SANPMKL  RIKKIRDDISTLKEQCREVLMAKQDVIDKARTVL+GNRNM+ KMQA
Subjt:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQ
        SMG PFVSD DDPAF +FKQITEEWTTQVQSK GEDGQEDA+C+DVNKLLFSAVVQ
Subjt:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQ

XP_004145489.1 spindle and kinetochore-associated protein 2 [Cucumis sativus]

5.7e-77

94.94

Show/hide

Query:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHL QHHQAADGL+NLFTKANLDLSVVQYRLEKEFQQ+YPESANPMKLVSRIKKI+DDISTLKEQCREVL+AKQDVID+ARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKF-GEDGQEDADCNDVNKLLFSAVVQA
        SMGIPFVSDLDDPAF+EFKQITEEWTTQVQSKF GEDGQEDADCNDVNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKF-GEDGQEDADCNDVNKLLFSAVVQA

XP_008452819.1 PREDICTED: spindle and kinetochore-associated protein 2 [Cucumis melo]

2.0e-77

94.9

Show/hide

Query:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHLHQHHQAADGL+NLFTKANLDLSVVQYRLEKEFQQ+YPESANPMKLVSRIKKI+DDISTLKEQCREVL AKQDVIDKARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQA
        SMGIPFVSDLDDPA AEFKQITEEWTTQVQSKFGED QEDADC++VNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQA

XP_022141272.1 spindle and kinetochore-associated protein 2 [Momordica charantia]

1.0e-70

89.68

Show/hide

Query:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA
        MG+ HHLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQ+YP+SANPMKLVSRIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVL+GNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVV
        SMGIP VSDLDD AFA+FK+ITEEWTTQVQSK G+DGQEDAD NDVNKLLFSAVV
Subjt:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVV

XP_038898183.1 spindle and kinetochore-associated protein 2 [Benincasa hispida]

5.9e-74

94.74

Show/hide

Query:  HLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQASMGIP
        HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQ+YPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVL+GNRNMLQK+QASMG+P
Subjt:  HLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQASMGIP

Query:  FVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQA
        FVSDLDDPAFAEFKQITEEWT QVQSKFGEDGQEDAD NDVNKLLFSAVVQA
Subjt:  FVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5I9 Protein FAM33A

2.8e-77

94.94

Show/hide

Query:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHL QHHQAADGL+NLFTKANLDLSVVQYRLEKEFQQ+YPESANPMKLVSRIKKI+DDISTLKEQCREVL+AKQDVID+ARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKF-GEDGQEDADCNDVNKLLFSAVVQA
        SMGIPFVSDLDDPAF+EFKQITEEWTTQVQSKF GEDGQEDADCNDVNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKF-GEDGQEDADCNDVNKLLFSAVVQA

A0A1S3BUQ8 Protein FAM33A

9.5e-78

94.9

Show/hide

Query:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHLHQHHQAADGL+NLFTKANLDLSVVQYRLEKEFQQ+YPESANPMKLVSRIKKI+DDISTLKEQCREVL AKQDVIDKARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQA
        SMGIPFVSDLDDPA AEFKQITEEWTTQVQSKFGED QEDADC++VNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQA

A0A5A7VFB8 Protein FAM33A

9.5e-78

94.9

Show/hide

Query:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHLHQHHQAADGL+NLFTKANLDLSVVQYRLEKEFQQ+YPESANPMKLVSRIKKI+DDISTLKEQCREVL AKQDVIDKARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQA
        SMGIPFVSDLDDPA AEFKQITEEWTTQVQSKFGED QEDADC++VNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQA

A0A6J1CJF1 Protein FAM33A

5.1e-71

89.68

Show/hide

Query:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA
        MG+ HHLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQ+YP+SANPMKLVSRIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVL+GNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVV
        SMGIP VSDLDD AFA+FK+ITEEWTTQVQSK G+DGQEDAD NDVNKLLFSAVV
Subjt:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVV

A0A6J1F6V9 Protein FAM33A

2.8e-69

87.82

Show/hide

Query:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA
        MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQ+YP+SANPMKL  RIKKIRDDISTLKEQCREVLMAKQDVIDKARTVL+GNRNM+ KMQA
Subjt:  MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQ
        SMG PFVSD DDPAF +FKQITEEWTTQVQSK GEDGQEDA+ +DVNKLLFSAVVQ
Subjt:  SMGIPFVSDLDDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQ

SwissProt top hits

e value

%identity

Alignment

Q4R8E8 Spindle and kinetochore-associated protein 2

6.7e-04

29.55

Show/hide

Query:  DGLINLFTKANLDLSVVQYRLEKEFQQVYPESA---NPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQ
        D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  ++    TL  + + V + +++   +    +    N++QK+Q
Subjt:  DGLINLFTKANLDLSVVQYRLEKEFQQVYPESA---NPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQ

Q8WVK7 Spindle and kinetochore-associated protein 2

2.3e-04

31.82

Show/hide

Query:  DGLINLFTKANLDLSVVQYRLEKEFQQVYPESA---NPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQ
        D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  I+    TL  + + V + +++   +    +    NM+QK+Q
Subjt:  DGLINLFTKANLDLSVVQYRLEKEFQQVYPESA---NPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQ

Arabidopsis top hits

e value

%identity

Alignment

AT2G24970.1 unknown protein

4.1e-41

56.08

Show/hide

Query:  HQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQASMGIPFV
        + HHQA D L+N+F++A+ DL+VV  +L+KEFQQ+YP +ANPMKL+ RIKK+++D++ LK QC ++L AKQD+IDKA+T L+GN N++QKM AS+G    
Subjt:  HQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQASMGIPFV

Query:  SDLDDPAFAEFKQITEEWTTQVQSK-FGEDGQEDADCNDVNKLLFSAV
         D DD A A+F QI +EWT QV+S+  GE   EDAD  D+NK+LFSA+
Subjt:  SDLDDPAFAEFKQITEEWTTQVQSK-FGEDGQEDADCNDVNKLLFSAV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAATCGATCATCATCTTCATCAACATCATCAAGCGGCCGATGGATTGATAAATTTGTTCACGAAGGCCAATCTCGATCTCTCAGTAGTTCAGTACAGGCTCGAGAA
GGAGTTTCAGCAAGTCTATCCTGAAAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACGGGATGATATATCAACATTGAAAGAGCAGTGTCGTGAAGTTT
TGATGGCTAAACAGGATGTAATCGATAAGGCTCGGACGGTTCTGCTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGTATACCCTTTGTTAGCGATCTC
GATGATCCTGCATTTGCGGAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAATTTGGGGAAGATGGCCAAGAGGACGCCGATTGTAATGATGTCAA
CAAGTTGCTATTCTCGGCCGTGGTGCAGGCTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGIDHHLHQHHQAADGLINLFTKANLDLSVVQYRLEKEFQQVYPESANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDL
DDPAFAEFKQITEEWTTQVQSKFGEDGQEDADCNDVNKLLFSAVVQA

PI0004962 (gene) of Melon (PI 482460) v1 genome