; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004971 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004971
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr01:14301982..14302161
RNA-Seq ExpressionPI0004971
SyntenyPI0004971
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.9e-1271.19Show/hide
Query:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVRVV
        MDTD A  N  NIC MKHLQ YQI KSTNKNQR KR++ N+E RVD +NQLEID+VRVV
Subjt:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVRVV

KAA0040939.1 stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa]1.9e-0472.22Show/hide
Query:  YQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVR
        YQI KSTNKNQR KR+Q N+EF+VD DNQLEID+++
Subjt:  YQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVR

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.0e-1072.22Show/hide
Query:  AAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVRVV
        A  N TNIC MKHLQ YQI KSTNKNQR KR++ N+EFRV+ DNQL+IDEV+VV
Subjt:  AAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVRVV

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.1e-1273.21Show/hide
Query:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEV
        MD D A  N TNIC MKHLQ YQI KSTNKNQR KR++ N+EFRVD DNQLEID+V
Subjt:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEV

TYK08229.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]4.1e-0463.41Show/hide
Query:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNL
        MD D    N TNIC MKHLQ YQI KSTNKNQR KR++ ++
Subjt:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNL

TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein4.9e-1172.22Show/hide
Query:  AAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVRVV
        A  N TNIC MKHLQ YQI KSTNKNQR KR++ N+EFRV+ DNQL+IDEV+VV
Subjt:  AAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVRVV

A0A5A7TI03 Stress-response A/B barrel domain-containing protein9.0e-0572.22Show/hide
Query:  YQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVR
        YQI KSTNKNQR KR+Q N+EF+VD DNQLEID+++
Subjt:  YQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVR

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.0e-1273.21Show/hide
Query:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEV
        MD D A  N TNIC MKHLQ YQI KSTNKNQR KR++ N+EFRVD DNQLEID+V
Subjt:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEV

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.0e-1371.19Show/hide
Query:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVRVV
        MDTD A  N  NIC MKHLQ YQI KSTNKNQR KR++ N+E RVD +NQLEID+VRVV
Subjt:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVRVV

A0A5D3CD18 GATA zinc finger domain-containing protein 10-like isoform X22.0e-0463.41Show/hide
Query:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNL
        MD D    N TNIC MKHLQ YQI KSTNKNQR KR++ ++
Subjt:  MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACGGACGCGGCTGCGGAGAACAGAACGAATATCTGTACTATGAAGCACCTACAAACGTATCAAATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAG
TCAGGGCAACCTAGAGTTCAGAGTCGACGATGACAACCAGCTCGAAATTGACGAAGTCCGGGTTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACACGGACGCGGCTGCGGAGAACAGAACGAATATCTGTACTATGAAGCACCTACAAACGTATCAAATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAG
TCAGGGCAACCTAGAGTTCAGAGTCGACGATGACAACCAGCTCGAAATTGACGAAGTCCGGGTTGTGTAA
Protein sequenceShow/hide protein sequence
MDTDAAAENRTNICTMKHLQTYQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIDEVRVV