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PI0004995 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004995
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Genome locationchr05:13815961..13817284
RNA-Seq ExpressionPI0004995
SyntenyPI0004995
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025967.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.6e-1544.37Show/hide
Query:  RSNNRRLRDVADDPQQVFDICNNNE------------------------------------------------------GVGPSSSYMDVGPSTFYMHGH
        RSNN RLRDV DD QQV DICNNNE                                                      GV PSSSYMDVGPST YMH H
Subjt:  RSNNRRLRDVADDPQQVFDICNNNE------------------------------------------------------GVGPSSSYMDVGPSTFYMHGH

Query:  GHRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV
        G  RG GE+N+Y Y+EA    SD QEY+QE ENQE+  Q RV
Subjt:  GHRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV

KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.0e-1440.48Show/hide
Query:  TRSNNRRLRDVADDPQQVFDICNNNE--------------------------------------------------------------------------
        TRSNN RLRDVADD QQV DICNNN+                                                                          
Subjt:  TRSNNRRLRDVADDPQQVFDICNNNE--------------------------------------------------------------------------

Query:  -----GVGPSSSYMDVGPSTFYMHGHGHRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV
             GVGPSSSYMDVGPST YMHGH H    GE+NEY Y+EA T  SD QEYQQE ENQEE  Q RV
Subjt:  -----GVGPSSSYMDVGPSTFYMHGHGHRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV

KAA0054357.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.9e-1748.12Show/hide
Query:  RSNNRRLRDVADDPQQVFDICNNNE---------------------------------------------GVGPSSSYMDVGPSTFYMHGHGHRRGCGEY
        RSNN RLRDV D PQQV DICNNNE                                             GVGPSS YMDVGPS  YMHGHG  RG GE+
Subjt:  RSNNRRLRDVADDPQQVFDICNNNE---------------------------------------------GVGPSSSYMDVGPSTFYMHGHGHRRGCGEY

Query:  NEYQYYEASTNASDPQEYQQELENQEEPGQPRV
        N+Y Y+EA  + SD QEYQQE ENQE+  Q RV
Subjt:  NEYQYYEASTNASDPQEYQQELENQEEPGQPRV

TYK01111.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]6.1e-1545.93Show/hide
Query:  TRSNNRRLRDVADDPQQVFDI---------------------------------------CNN-------NEGVGPSSSYMDVGPSTFYMHGHGHRRGCG
        TRSNN RLRDV DDPQQV D+                                       C++       + GVGPSSSYMDV PST YMHGHG  RG G
Subjt:  TRSNNRRLRDVADDPQQVFDI---------------------------------------CNN-------NEGVGPSSSYMDVGPSTFYMHGHGHRRGCG

Query:  EYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV
        ++NEY Y+EA  + SD QEYQQE ENQE+  Q RV
Subjt:  EYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV

TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]5.0e-1746.81Show/hide
Query:  RSNNRRLRDVADDPQQVFDICNNNE-----------------------------------------------------GVGPSSSYMDVGPSTFYMHGHG
        RSNN RLRDVADDPQQV DICNNNE                                                     GVGPSSSYMDV PST YM  HG
Subjt:  RSNNRRLRDVADDPQQVFDICNNNE-----------------------------------------------------GVGPSSSYMDVGPSTFYMHGHG

Query:  HRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV
        H RG  E+NEY Y+EA  + SD QEYQQE ENQE+  Q RV
Subjt:  HRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.0e-1540.48Show/hide
Query:  TRSNNRRLRDVADDPQQVFDICNNNE--------------------------------------------------------------------------
        TRSNN RLRDVADD QQV DICNNN+                                                                          
Subjt:  TRSNNRRLRDVADDPQQVFDICNNNE--------------------------------------------------------------------------

Query:  -----GVGPSSSYMDVGPSTFYMHGHGHRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV
             GVGPSSSYMDVGPST YMHGH H    GE+NEY Y+EA T  SD QEYQQE ENQEE  Q RV
Subjt:  -----GVGPSSSYMDVGPSTFYMHGHGHRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV

A0A5A7SMM2 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.2e-1544.37Show/hide
Query:  RSNNRRLRDVADDPQQVFDICNNNE------------------------------------------------------GVGPSSSYMDVGPSTFYMHGH
        RSNN RLRDV DD QQV DICNNNE                                                      GV PSSSYMDVGPST YMH H
Subjt:  RSNNRRLRDVADDPQQVFDICNNNE------------------------------------------------------GVGPSSSYMDVGPSTFYMHGH

Query:  GHRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV
        G  RG GE+N+Y Y+EA    SD QEY+QE ENQE+  Q RV
Subjt:  GHRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV

A0A5A7UIF6 Serine/threonine-protein phosphatase 7 long form-like protein1.4e-1748.12Show/hide
Query:  RSNNRRLRDVADDPQQVFDICNNNE---------------------------------------------GVGPSSSYMDVGPSTFYMHGHGHRRGCGEY
        RSNN RLRDV D PQQV DICNNNE                                             GVGPSS YMDVGPS  YMHGHG  RG GE+
Subjt:  RSNNRRLRDVADDPQQVFDICNNNE---------------------------------------------GVGPSSSYMDVGPSTFYMHGHGHRRGCGEY

Query:  NEYQYYEASTNASDPQEYQQELENQEEPGQPRV
        N+Y Y+EA  + SD QEYQQE ENQE+  Q RV
Subjt:  NEYQYYEASTNASDPQEYQQELENQEEPGQPRV

A0A5D3BMS3 GATA zinc finger domain-containing protein 10-like isoform X22.9e-1545.93Show/hide
Query:  TRSNNRRLRDVADDPQQVFDI---------------------------------------CNN-------NEGVGPSSSYMDVGPSTFYMHGHGHRRGCG
        TRSNN RLRDV DDPQQV D+                                       C++       + GVGPSSSYMDV PST YMHGHG  RG G
Subjt:  TRSNNRRLRDVADDPQQVFDI---------------------------------------CNN-------NEGVGPSSSYMDVGPSTFYMHGHGHRRGCG

Query:  EYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV
        ++NEY Y+EA  + SD QEYQQE ENQE+  Q RV
Subjt:  EYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV

A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X22.4e-1746.81Show/hide
Query:  RSNNRRLRDVADDPQQVFDICNNNE-----------------------------------------------------GVGPSSSYMDVGPSTFYMHGHG
        RSNN RLRDVADDPQQV DICNNNE                                                     GVGPSSSYMDV PST YM  HG
Subjt:  RSNNRRLRDVADDPQQVFDICNNNE-----------------------------------------------------GVGPSSSYMDVGPSTFYMHGHG

Query:  HRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV
        H RG  E+NEY Y+EA  + SD QEYQQE ENQE+  Q RV
Subjt:  HRRGCGEYNEYQYYEASTNASDPQEYQQELENQEEPGQPRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTGGGAACGATTTCCCACAATGGCTCCACAACTTTGACATGCAAACAATCATCTACTACCTGGACGAGCACACGGTTCACGAGATCGAACAACAGAAGACTTCG
TGATGTTGCCGATGATCCACAACAAGTCTTTGATATATGTAATAATAATGAGGGGGTCGGTCCATCGTCTTCATACATGGATGTCGGTCCATCAACTTTTTACATGCATG
GACATGGACACAGACGTGGCTGCGGAGAATATAACGAATATCAGTACTATGAAGCATCTACAAACGCATCAGATCCACAAGAGTACCAACAAGAACTAGAGAATCAAGAG
GAGCCAGGGCAACCAAGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTGGGAACGATTTCCCACAATGGCTCCACAACTTTGACATGCAAACAATCATCTACTACCTGGACGAGCACACGGTTCACGAGATCGAACAACAGAAGACTTCG
TGATGTTGCCGATGATCCACAACAAGTCTTTGATATATGTAATAATAATGAGGGGGTCGGTCCATCGTCTTCATACATGGATGTCGGTCCATCAACTTTTTACATGCATG
GACATGGACACAGACGTGGCTGCGGAGAATATAACGAATATCAGTACTATGAAGCATCTACAAACGCATCAGATCCACAAGAGTACCAACAAGAACTAGAGAATCAAGAG
GAGCCAGGGCAACCAAGAGTTTAA
Protein sequenceShow/hide protein sequence
MGLGTISHNGSTTLTCKQSSTTWTSTRFTRSNNRRLRDVADDPQQVFDICNNNEGVGPSSSYMDVGPSTFYMHGHGHRRGCGEYNEYQYYEASTNASDPQEYQQELENQE
EPGQPRV