; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005002 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005002
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBeta-galactosidase
Genome locationchr09:16908063..16908461
RNA-Seq ExpressionPI0005002
SyntenyPI0005002
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037910.1 Beta-galactosidase [Cucumis melo var. makuwa]4.9e-0548.68Show/hide
Query:  MVSERGKDKTLDIEYEETRANHEYTAAADMNAAVAAAVDTAMEKVVQQLQKMPVVTSATSAESSGQHSAVDLHHAP
        MVSE+GKD TLD    ET+            AA A A    + K++QQLQKMPVVT+  S+ESS QHS  +  HAP
Subjt:  MVSERGKDKTLDIEYEETRANHEYTAAADMNAAVAAAVDTAMEKVVQQLQKMPVVTSATSAESSGQHSAVDLHHAP

KAA0061447.1 Beta-galactosidase [Cucumis melo var. makuwa]3.8e-0535.81Show/hide
Query:  MVSERGKDKTLDIEYEETRANHEYTAAADMNAAVAAAVDTAMEKVVQQLQKMPVVTSATSAESSGQHSAVDLHHAPL----------SVSLTVQMNGFTL
        MVSE+  ++TL+    ET+   E   AA   A +AAAVD A+EK++Q LQK P+  +    +     S   L HAPL             +T     F  
Subjt:  MVSERGKDKTLDIEYEETRANHEYTAAADMNAAVAAAVDTAMEKVVQQLQKMPVVTSATSAESSGQHSAVDLHHAPL----------SVSLTVQMNGFTL

Query:  LPPVQPSNPSANTHAHAPPLPSDHGQPPILT------TQSPLSVNPLQ
           VQPSNPS + H HAP   S  GQ P         ++  L V+PLQ
Subjt:  LPPVQPSNPSANTHAHAPPLPSDHGQPPILT------TQSPLSVNPLQ

TrEMBL top hitse value%identityAlignment
A0A5A7T3J8 Beta-galactosidase2.4e-0548.68Show/hide
Query:  MVSERGKDKTLDIEYEETRANHEYTAAADMNAAVAAAVDTAMEKVVQQLQKMPVVTSATSAESSGQHSAVDLHHAP
        MVSE+GKD TLD    ET+            AA A A    + K++QQLQKMPVVT+  S+ESS QHS  +  HAP
Subjt:  MVSERGKDKTLDIEYEETRANHEYTAAADMNAAVAAAVDTAMEKVVQQLQKMPVVTSATSAESSGQHSAVDLHHAP

A0A5A7V0I4 Putative tRNA pseudouridine synthase1.0e-0334.78Show/hide
Query:  ERGKDKTLDIEYEETRANHEYTAAADMNAAVAAAVDTAMEKVVQQLQKMPVVTSATSAESSGQHSAVDLHHAPL----------SVSLTVQMNGFTLLPP
        E+  ++TL+   EET+   E   A    AAV AAV TAMEK++Q LQK P+  +    +     S   + H PL             +T     F     
Subjt:  ERGKDKTLDIEYEETRANHEYTAAADMNAAVAAAVDTAMEKVVQQLQKMPVVTSATSAESSGQHSAVDLHHAPL----------SVSLTVQMNGFTLLPP

Query:  VQPSNPSANTHAHAPPLPSDHGQPPILTTQSPLSVNPL
        VQPSNPS + H HAPP+ S+  QP I+   +  S   L
Subjt:  VQPSNPSANTHAHAPPLPSDHGQPPILTTQSPLSVNPL

A0A5A7V3J5 Beta-galactosidase1.8e-0535.81Show/hide
Query:  MVSERGKDKTLDIEYEETRANHEYTAAADMNAAVAAAVDTAMEKVVQQLQKMPVVTSATSAESSGQHSAVDLHHAPL----------SVSLTVQMNGFTL
        MVSE+  ++TL+    ET+   E   AA   A +AAAVD A+EK++Q LQK P+  +    +     S   L HAPL             +T     F  
Subjt:  MVSERGKDKTLDIEYEETRANHEYTAAADMNAAVAAAVDTAMEKVVQQLQKMPVVTSATSAESSGQHSAVDLHHAPL----------SVSLTVQMNGFTL

Query:  LPPVQPSNPSANTHAHAPPLPSDHGQPPILT------TQSPLSVNPLQ
           VQPSNPS + H HAP   S  GQ P         ++  L V+PLQ
Subjt:  LPPVQPSNPSANTHAHAPPLPSDHGQPPILT------TQSPLSVNPLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATCAGAGCGGGGTAAAGATAAAACCCTAGACATCGAATATGAGGAAACCAGAGCTAATCACGAGTACACTGCTGCCGCTGATATGAATGCCGCCGTCGCCGCCGC
CGTTGACACCGCCATGGAAAAAGTGGTCCAGCAGCTTCAGAAGATGCCAGTGGTCACGTCTGCCACCTCCGCCGAGTCGTCAGGTCAGCACAGCGCCGTAGATCTGCATC
ACGCGCCGTTGTCTGTGAGTCTCACCGTCCAGATGAATGGGTTCACCTTGCTGCCGCCAGTCCAACCGTCTAACCCTTCTGCCAATACGCACGCTCACGCTCCGCCGCTG
CCCTCCGACCATGGACAGCCGCCTATTCTGACTACCCAATCGCCGCTGTCTGTTAATCCTTTACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTATCAGAGCGGGGTAAAGATAAAACCCTAGACATCGAATATGAGGAAACCAGAGCTAATCACGAGTACACTGCTGCCGCTGATATGAATGCCGCCGTCGCCGCCGC
CGTTGACACCGCCATGGAAAAAGTGGTCCAGCAGCTTCAGAAGATGCCAGTGGTCACGTCTGCCACCTCCGCCGAGTCGTCAGGTCAGCACAGCGCCGTAGATCTGCATC
ACGCGCCGTTGTCTGTGAGTCTCACCGTCCAGATGAATGGGTTCACCTTGCTGCCGCCAGTCCAACCGTCTAACCCTTCTGCCAATACGCACGCTCACGCTCCGCCGCTG
CCCTCCGACCATGGACAGCCGCCTATTCTGACTACCCAATCGCCGCTGTCTGTTAATCCTTTACAGTAG
Protein sequenceShow/hide protein sequence
MVSERGKDKTLDIEYEETRANHEYTAAADMNAAVAAAVDTAMEKVVQQLQKMPVVTSATSAESSGQHSAVDLHHAPLSVSLTVQMNGFTLLPPVQPSNPSANTHAHAPPL
PSDHGQPPILTTQSPLSVNPLQ