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PI0005019 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005019
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionflowering time control protein FPA
Genome locationchr12:7889120..7889875
RNA-Seq ExpressionPI0005019
SyntenyPI0005019
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0009553 - embryo sac development (biological process)
GO:0009911 - positive regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
GO:0031048 - chromatin silencing by small RNA (biological process)
GO:0000785 - chromatin (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039938.1 flowering time control protein FPA [Cucumis melo var. makuwa]1.2e-0784.21Show/hide
Query:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
        MMGPNWRRQSPPAPGILSSPATGIRPPPPV S  +  D
Subjt:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
XP_008460035.1 PREDICTED: flowering time control protein FPA [Cucumis melo]1.2e-0784.21Show/hide
Query:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
        MMGPNWRRQSPPAPGILSSPATGIRPPPPV S  +  D
Subjt:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
XP_038875816.1 flowering time control protein FPA isoform X1 [Benincasa hispida]1.2e-0784.21Show/hide
Query:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
        MMGPNWRRQSPPAPGILSSPATGIRPPPPV S  +  D
Subjt:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
XP_038875817.1 flowering time control protein FPA isoform X2 [Benincasa hispida]1.2e-0784.21Show/hide
Query:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
        MMGPNWRRQSPPAPGILSSPATGIRPPPPV S  +  D
Subjt:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
XP_038875818.1 flowering time control protein FPA isoform X3 [Benincasa hispida]1.2e-0784.21Show/hide
Query:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
        MMGPNWRRQSPPAPGILSSPATGIRPPPPV S  +  D
Subjt:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
TrEMBL top hitse value%identityAlignment
A0A0A0KEU8 Uncharacterized protein6.0e-0884.21Show/hide
Query:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
        MMGPNWRRQSPPAPGILSSPATGIRPPPPV S  +  D
Subjt:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
A0A1S3CCU3 flowering time control protein FPA6.0e-0884.21Show/hide
Query:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
        MMGPNWRRQSPPAPGILSSPATGIRPPPPV S  +  D
Subjt:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
A0A5A7TAF7 Flowering time control protein FPA6.0e-0884.21Show/hide
Query:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
        MMGPNWRRQSPPAPGILSSPATGIRPPPPV S  +  D
Subjt:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
A0A6J1JY20 flowering time control protein FPA isoform X11.3e-0762.96Show/hide
Query:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD-------HQPSSENRL
        M+GPNWRRQSPP PGILSSPATGIRPPPPV S  S  D       H+ S  +R+
Subjt:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD-------HQPSSENRL
E5GC87 RNA-binding protein (Fragment)6.0e-0884.21Show/hide
Query:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
        MMGPNWRRQSPPAPGILSSPATGIRPPPPV S  +  D
Subjt:  MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGTCCAAATTGGAGAAGGCAATCTCCTCCAGCACCTGGGATACTTTCTTCTCCAGCCACTGGTATTCGTCCACCTCCACCTGTGAGTTCATTAACCTCTCATTC
TGATCATCAACCGTCATCTGAAAATCGACTGAAGAAAGCCATCGTCGTCCTTCTCTGGCTACCCGGCAATGACGGAGTAATCAAAGCCATATTTAGATCTCTGTTTTCTG
ATCCCTCTGTGCCTCTTGCCGCTGCACCTCGGCGTGATCAAGTAGTAATTGATTCATCTTTGAGGGCTTTTCTACTTTCATCCATTCAAAAACTATTGGATTCCTTTAAC
CTATTGGAAGAGCGAATAAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGTCCAAATTGGAGAAGGCAATCTCCTCCAGCACCTGGGATACTTTCTTCTCCAGCCACTGGTATTCGTCCACCTCCACCTGTGAGTTCATTAACCTCTCATTC
TGATCATCAACCGTCATCTGAAAATCGACTGAAGAAAGCCATCGTCGTCCTTCTCTGGCTACCCGGCAATGACGGAGTAATCAAAGCCATATTTAGATCTCTGTTTTCTG
ATCCCTCTGTGCCTCTTGCCGCTGCACCTCGGCGTGATCAAGTAGTAATTGATTCATCTTTGAGGGCTTTTCTACTTTCATCCATTCAAAAACTATTGGATTCCTTTAAC
CTATTGGAAGAGCGAATAAAGAAATAA
Protein sequenceShow/hide protein sequence
MMGPNWRRQSPPAPGILSSPATGIRPPPPVSSLTSHSDHQPSSENRLKKAIVVLLWLPGNDGVIKAIFRSLFSDPSVPLAAAPRRDQVVIDSSLRAFLLSSIQKLLDSFN
LLEERIKK