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PI0005022 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005022
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr02:20208056..20208399
RNA-Seq ExpressionPI0005022
SyntenyPI0005022
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052859.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.7e-2764.29Show/hide
Query:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIE-----------------ESH----------RGGLTNKDDHQRRQG
        MK+KESE VSDY T++QTVVNQLKRNG+T  D R+VEKILRSLTNDF+NVVCAIE                 E+H          RGGLTNKDDHQRRQG
Subjt:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIE-----------------ESH----------RGGLTNKDDHQRRQG

Query:  NVCTTQSRKRTW
        NVCTTQSRK+TW
Subjt:  NVCTTQSRKRTW

KAA0060771.1 polyprotein [Cucumis melo var. makuwa]1.5e-1855.66Show/hide
Query:  SDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEESHR------------------------------GGLTNKDDHQRRQGNVCTTQ
        +D   + Q VVNQLK NG+TL DARVVEKI  SLTNDFENVVCA EES                                 G+TNKDDHQRRQGNVCTTQ
Subjt:  SDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEESHR------------------------------GGLTNKDDHQRRQGNVCTTQ

Query:  SRKRTW
        SRKRTW
Subjt:  SRKRTW

KYP38589.1 hypothetical protein KK1_040157 [Cajanus cajan]9.5e-1887.72Show/hide
Query:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES
        MKMKESEGVSDY TR+QTVVNQL +NGETLTD RVVEKILRSLT+ FENVVCAIEES
Subjt:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES

PKU61774.1 hypothetical protein MA16_Dca028474 [Dendrobium catenatum]2.9e-1992.98Show/hide
Query:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES
        MKMKESEGVSDY TR+QTVVNQLKRNGE LTDARVVEKILRSLTN+FENVVCAIEES
Subjt:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES

PKU83305.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum]1.1e-1891.23Show/hide
Query:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES
        MKMKESEGVSDY TR+Q VVNQLKRNGE LTDARVVEKILRSLTN+FENVVCAIEES
Subjt:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES

TrEMBL top hitse value%identityAlignment
A0A151R7V8 Uncharacterized protein4.6e-1887.72Show/hide
Query:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES
        MKMKESEGVSDY TR+QTVVNQL +NGETLTD RVVEKILRSLT+ FENVVCAIEES
Subjt:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES

A0A2I0VED6 Uncharacterized protein1.4e-1992.98Show/hide
Query:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES
        MKMKESEGVSDY TR+QTVVNQLKRNGE LTDARVVEKILRSLTN+FENVVCAIEES
Subjt:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES

A0A2I0X5W4 Retrovirus-related Pol polyprotein from transposon TNT 1-945.4e-1991.23Show/hide
Query:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES
        MKMKESEGVSDY TR+Q VVNQLKRNGE LTDARVVEKILRSLTN+FENVVCAIEES
Subjt:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEES

A0A5D3C1S7 Retrovirus-related Pol polyprotein from transposon TNT 1-948.3e-2864.29Show/hide
Query:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIE-----------------ESH----------RGGLTNKDDHQRRQG
        MK+KESE VSDY T++QTVVNQLKRNG+T  D R+VEKILRSLTNDF+NVVCAIE                 E+H          RGGLTNKDDHQRRQG
Subjt:  MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIE-----------------ESH----------RGGLTNKDDHQRRQG

Query:  NVCTTQSRKRTW
        NVCTTQSRK+TW
Subjt:  NVCTTQSRKRTW

A0A5D3CND8 Polyprotein7.1e-1955.66Show/hide
Query:  SDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEESHR------------------------------GGLTNKDDHQRRQGNVCTTQ
        +D   + Q VVNQLK NG+TL DARVVEKI  SLTNDFENVVCA EES                                 G+TNKDDHQRRQGNVCTTQ
Subjt:  SDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEESHR------------------------------GGLTNKDDHQRRQGNVCTTQ

Query:  SRKRTW
        SRKRTW
Subjt:  SRKRTW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGAAGGAGTCAGAAGGAGTATCTGACTACTTCACCCGAATTCAAACGGTGGTGAACCAACTTAAACGCAATGGAGAAACCCTCACAGATGCCAGGGTTGTGGA
GAAAATCCTTCGATCATTGACAAATGACTTTGAAAATGTGGTATGTGCAATCGAGGAAAGTCATAGAGGAGGCCTTACAAACAAAGATGACCATCAACGAAGACAAGGCA
ATGTATGCACAACACAATCGAGGAAGAGGACGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGAAGGAGTCAGAAGGAGTATCTGACTACTTCACCCGAATTCAAACGGTGGTGAACCAACTTAAACGCAATGGAGAAACCCTCACAGATGCCAGGGTTGTGGA
GAAAATCCTTCGATCATTGACAAATGACTTTGAAAATGTGGTATGTGCAATCGAGGAAAGTCATAGAGGAGGCCTTACAAACAAAGATGACCATCAACGAAGACAAGGCA
ATGTATGCACAACACAATCGAGGAAGAGGACGTGGTAG
Protein sequenceShow/hide protein sequence
MKMKESEGVSDYFTRIQTVVNQLKRNGETLTDARVVEKILRSLTNDFENVVCAIEESHRGGLTNKDDHQRRQGNVCTTQSRKRTW